Csor.00g138950 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g138950
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionDead box ATP-dependent RNA helicase, putative
LocationCsor_Chr01: 7098291 .. 7106053 (-)
RNA-Seq ExpressionCsor.00g138950
SyntenyCsor.00g138950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAGCCTCAATCAACAAGAACCAAAGGTTTCCCTCGAAACCTTAAAACCCATATTTTATACAAATGGCAAAAATAGACTTCCCTAGGCGTCCTGCAACATTATTGACTTTGCAGTTTCTATAAAAACGCTCCTTGTAGGAATCTTTGCGATTACTTACCATCAATTTTTCCAACCGGCGAACGGAAGGTAGTTTTTGAATTGAAAGGTTTTTTTTTTTGCTTTTTCTTTTCTGTTTATTTCATTCATTCGATGAAATTTTTTTTCTTTTTATCAAACTCTCCAACCACTAATTTTTTTCATTCTTTCTTTTTATCAAATTCTCCGACCACTAATTTTTTCTAATAGGAAAGATACATTTCATTTAGTTGTTAGGTAACCTAACCAAGCGAGAAACATAAACAATTGAGTGATATTATTGAATACTGATTACAAATAACCTAACCTAATCAAATCTGAAAAATATTTAAATAGATCCCTAAAAATACTCTCAACTATTTTACCTAATCAAATTCTTCTAACTATCCCTCCCTTTAACTTATTCTTAACCTATTCTTTCGGGTTAAGAATTAGTTCAAGTTAGAAAAACTCTTCAAGTTATTCACGCAACTTCCGAAATGCTTCTAATTTTAAAGGCTTTGTCAACAAATCAGCAAGTTGATTTCGGATACCACAAAATAATAAATTAACAGTTCCTTCTTTTGTAAGATCTCTAAGAAAGTGAAATCTTACTCTTTTGTGTTTGGAATGTCCATGTAGAATTGAATTTTTGGATAGCTTAATAGTTGAAGTATTATCACACATTAGCTTTGTTCCTTCTATTTGAGAGTGACCAATCTCTTTGAGTAGCCTCCTCATCCAAACAGCTTGACATGCACCGGCACTAGCAGCAACAAACTCAGCTTCCGTGGTTGATAAGGTGACTATAGGCTGCTTACGAGAAGACCAAGCTATTGCTCCTCCACTCATCATAAACACATAGCTTGAAGTATTCTTGCTATCTTCCATGTCTCCGGCATAGTCACTATCAGTAAATTCATTTAAATCACTAACTCCTCCCTTTCCATAAAATACACCATAATCTATCGTACCTTTCAAGTATCTTAAAACCCTTTTAGCTGTTGCAAAATATTGTTGTGTTGGACATGCCATGAAACGACTTATCAAACTTACAACAAACATGAGATCAAGACGAGTAGCTGTGAGATACATCAGACTTCCCACTATTTGTTTATACAAAGTTACATCTACTTTTGCACCATTTTTATCTTGGCCAATTTTCTCTATTCCAAGAAAAAATCTCATCTGACCTAAGTCAGTTATATCAAACTCTTTCTTCATGAAACGTTTAAACTCCTCCAATAATTCTTCATCGTCTCCAGTAAATAAAAGATCATCAACATAATGCTTACAATAAGAATTTTATCTCCCTTCCTCTTGATGAAGAGAGTGTTAGGTTATGGAGCCTGCTCCTTATTTATAGCTTGGTCAACGGTTATATCCGGTAAAACTATATTTGGTAAAGCTATATTTGGTAAAGCTATATCCGGTAAAACTATATATGGTAAATAGCTATATATAGTAGATTGCTAAATCTGGTAAGGCTATATATAGTAAACTAAACCATATATATATCCGTCCGGTAGAGCTTTGAAAATGTACTTTCTATTCTCTGTACTCTCTCTTGTTGTACATACCTGAAGTCATCAATAAAAAAAGAAAAATTCTTTTAACCAGAGTTCTCCTTGCAATTTTCACTATCTCATTCTTTGTGTTCATCTAGATCGAGCGTGTGCGTTGTTGTGCGATCTTAACAACTGGTATCAGAGCTAACAACTGGTATCGATCCCAACAACTGGTATCAGAGCCAGGCGGAAGTCAGAGCCAGGCGGAAGTCAGAGCTAGGCGAAATTCACCACGATCTGTGAAGATGGAAAGTTCAAAGATTGGAATTGAGAAGTTCAATGGATCCGTTTCGGTTTCTGGAAGATGTAGATTGGAGATTATCTGTACCAGAAAGATCTTCACGAACCTCTGTTGGGGGTGAAGTCGGATACCATGACCACGAAACAGTGGAAGCTCAAGGATCGACAAGCCTTGGGGCTGATCTGGTTGACGCTATCCAGAAACGTGGCGTTCAACATTATCAAGGAGAAGACAACCTCAGGTCTGTTGAAGACGCTGTCGAATATGTATGAAAAACCGTCGGCTATGAACAAGGTGTATTTGATGCGGAGATTGTTATGAGTTCTTGTGAGAACTGCTTTATGAGCAAACAGAAACGAGTTAGCTTCACAAAGACTGTTAGAGAATTGAAGAAAAGTACCGGAAGCGTCGTTGAAACTCCAGAGGAGGTTGCGTCGGCCGGAAGCGTCGCTAAAACTCCAGAGGGGGTTGCGTCGGCCGGAAGCGTCGCTGAAACTCCAGAGGGGGTTGCGTCGCTGAAACTCCAGAGGGGGTTGCGTCGCTGAAACTCCAGAGGGGGTTGCGTCGGCCGGAAGCGTCGCTGAAACTCTAGAGGGGGTTGCGTCGGCCGGAAGCGTCGCTGAAACTCTAGAGGGGGTTGCGTCGGCCGGAAGCGTCGCTGAAAATCCAGAGGAAGTTGCGTTGACCGGAAGCGTCGTTGAAACTCCAGAGGAAGTTGTGTCGGTCAGAAGCGTCGCTGAAACTCCAGAGGGGGTTGCGTCGGCTGGAAGCGTCGCTCAAACTCCAGAGGAAGTTGCGTCGACCGGAAGCGTCGCTGAAACTCCAGAGGGGGTTGTGTCGGCCGGAAGCGTCGTTGAAACTCCAGAGGAAGTTGCGTCGGCCAGAAGCGTCGCTGAAACTCCAGAGGGGGTTGCGTCGGCCGGAAGCGTCGCTGAATCACCAGATGTGAAGCAAGTGGGAGTTGAGGTTGAGTTGCTGAAAGATTCACATAGTGATGTTGTAGCAGATACTCATGAAACTCCTGAAACTCTTGCTGAGAAACCAGAGGTGAAGCAAGTGGGAGTTGAGGCTGAGTTGCTCAAAGATTCACAGAGTGATGTTGTAGCGGATACTCAAGAAACTCCTAAGACTCTTGCTGAGAAACCAGAGGTGAAGCAAGTGGGAGTTGAGGCTGAGTTGCTCAAAGATTCACAGAGTGATGTTGTAGCGGATACTCAAGAAACTCTTGAGACTCTTGCTGAGAAACTAGAGGTGAAGCAAGTGGGAGTTGAGGTTGAGTTGCTGAAAGATTCACATAGTGATGTTATAGCAGATACTCATGAAACTCCTGAGACTCTTGCCGAGAAACTAGAGGTGAAGCAAGTGGGAGTTGAGGTTGAGTTGCTGAAAGATTCACATAGTGATGTTGTAGCAGATACTCATAAAACTCCTGAGACTATTGCTGAGAAACCAGAGGTGAAGCAAGTGGGAGTTGAGATTGAGTTGCTGAAAGATTCACATAGTGATGTTGTAGCAGATACTCAAGAAACTCCTGAGACTCATGCAGTTGGCGAGGAACCCGGTCTATCATTCAAAACACAGAAGGCGATACCATTTCACTCGGAGGTTAGTGGAAGATGGTGATGTGTTTTGAGAAGATAGAGGGTGCAAAGAATCCAGCAAACATGTTGACAAAATGTGTTCATGTTGGAATATTGAGGTTGTGCAAAACCTCAATTGGTATGGTGCAGTGAAGACATTCATGATCGTTTGAGAGTGAAATTCTTGGTTGACTGGATCAGTCTCCAAGTGGGAGAATTGTTAGGTTATGGAGCCTGCTCCTTATTTATAGCTTGGTCAACGGTTATATTCGGTAAATCTATATTTGGTAAAGCTATATCCGGTAAAGCTATATATGGTAAATAGCTATATATAGTAGATTGCTAAATCTGGTAAAACTATATATAGTAAACTAAACCATATATATATCCGTCCGGTAGAGTTTTGAAAATGTACTTTCTATTCTCTGTACTCTCTCTTGTTGTACATACCTGAAGTCATCAATAAAAAAGAAAAATCCTTTTAGCCAGAGTTCTCCTTGCAATTTTCACTATCTCATTCTTTGTGTTCATCTAGATCGAGCGTGTGCATTGTTGTGCGATCCTAACAACTGGTATCGATCCCAACAACTGGTATCGATCCCAACAGAGAGTTTGCTCACTGGAACTGCTTTTGAATCCTTCGTTGATGAAGTAGGATTCTATTCGACTAAACCAGGTTCTAGGTGTTTGTTTTAATCCGTAGAGAGCCTTTTGGAGTTTGTACACCATCTCCTCACTTCCCTTTTTCTCATAGCCTTCACCGGAATCTGCTAACCATATAGGTGGATGTCGATTTCTCCCCTCCCATATTGTCAAATCTGGTGCAACAGTTTTCAGCAACTGGTTCAATTGTTTCAGCAACCGGTTCAGTCGTTTCCTCTGTGATTCTTCCTCCTTCGGCTGTGTTCTTATCAATTTCAATGTTTTTCCCCAGTCCAATTTTTTCGTTGCTCTCCATTTACCCATTTTTGGAAATGGAGTCCCCTTTCATACATGCCTCACAGGTGGTGTTTGGAGCTCCAATTTGCGGCAGGCCTTTCACCATGTTTTTGTGTTTCAAGGTGCACAAGCTTTTGTAGCCGAGATGACCATATCGATGGTGCCAAAGTGTTGACTGATCCGTATTTGAAACTTGGAGGCATTTTTCTTCATTTGTTGTAGTAGATGGTTCAGTACCCAAAATAAACTGCTGATTTGCACTCATAATTGACTCTGCTATTTTTCCTTTTTGTGGATGATAAAGGCTACATATCTTTAAATAATACTGCTACTTCTTTTTCTTGTAGTTGTCAAACGCTCAAGAGATTATTTTTGAGTTCAGGTACCCAATACACATTACTAATAGTGCAACGAACCCCATGCAAAGTTAATTTCACTGCACCCTTTCCCATAACTTTCATACTTGTATTATTTCTAAGTTTGACAATGTGGGAAAATGTCTGTCTTAGCTGGAAAACATACCTTCACTTGCACACATATGGTTTGAGCAACCAGAATCTAAGAACCAAGCATCACTCCTTTTTGCTTCATGTCTTTCCATACGAGTCATTAACAACATTTCATCCTCTTCTTCCAGCTCGCTCTACGTAATTCAATTCCTTATTCAACTTTGGACATTCATATTGAAAATGACCTAAGTCATGACACCTATAACATTCAACAGTTGCTTTGTTGAAAGTTGATCTTCCTCTTCCGCGTCCTCTGCCCCGGTAAGTTCCTCTTCCTCTGTTACTTATTTCCGTTCGTCCTTCGACTTTTAGAACTTGCTCCTCATGCTGGATCTTCGAAATTTTTGTTCATGCACCACTAATGAACTTTGTAATTCATCAATGGACATGTTATCAGTATCTTTGGATTCCTCATTGGATACTGCAACATAAGTAAATTTTTCAGTCAGGGTACGCATAATTTTTTCTACAATTTTCTTGTCTGGCATATCTTCTCCATTGCTTCTCATCTTGTTGGAGATTATCATCACTCTTGCAAAATAATCTGTGATACTTTCATCATTCTTTATCTCTTGGATCTCAAATTCTCTCTTGTTGGAGATTATCATCGTCGATACTTTCATTATTCTTTATCTCTTGGATCTCAAATTCTCTTCTTAATGCATTAAGAAGAAATTTCTTCACTTTTTTGTTTCCGCCAAATTTTCGCTTCATTGAGTCCCAAACAATCTTGGGTGTGCGACGATCCAAGATTTGTTCAAAGACCGTACGAACAATTGCCTGGAAGAGTTAATGCTTTACTTGGTAATCTTTGAGTCTAGCATCATCAAGGTGGCCCTTTTGTTCCTCAGTCAGAATTCTTCCTTCCTCTGGTTCTGAGAAACCAATCTCCACCACACTCCATACACCCTTTGCTCTAAGCAAATTTTCCATAAGCTCACCGATGATCATAGTGATCATCGAAGTGAGGGATCTTCGCTAAAGTTTTATCTTCACTCATACGCTCTATTTGATCACTCTAAAATTGCGGCTCTATACCAATTATTAGGTTTTGACATAACTAAGCCAGAAACCTAAACAATATTATAGCCTTACAAATAACCATAAATAGAAGCTATCCGAAACAAATAAACAAATTTGAAAAATATTTAAATAGATCCCTAAAAATACTCTAACTATTTTGACCTAATCAAATTCTTCTAACATTAGTGCCGAAAGAAACACCAAAACATGCTTTAAAAGATCTATTAGTTATATACGTTCCTCCTTTACATATTCATGTTAATATTAAACAAAAATAAGGATACTTCGCTTTGTTTTTCATTCAGAGTTCACAGTATGATAGAAACTTGCTCAGTTTACTGATATCAGATGTTGCCTGATTGTTGGAGGGCTTTCAAGAAAGGTACGACCTATTGTACGTTGGTGATTTTATTTCAATAATGCAGAAGTTTGAACATTTACCTGGTATCCTATATTGTAATGTATTTAAAAAAAAATCCGGTATGTACTTCACATAATATATCAAGGTTCTGTTTCATCATAAATGTGAGGGTTTATTAAAGAATCAAAATGCATTATTGTAGGATTGTTGGCTTCTTTTTCCTAGAAATATGTTTGATTTTGCTCTCATTTATTTGGTATAAGGGTATTTTATTAATTTAATTTTGTTCAGGAGCAAGAGGCTGCCTTAAGATCAATGCCAGATGTGGTTGTGGCCACTCCAGGACGCATGATTGATCATCTACGCAATTCCATGTCTGTGGATTTGGATGATTTAGCCGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCTGAAATTCGTGAATTGGTATATTTTGGCCACTTGGTGCACTTTTTATGATGGAAATTGTATGAATCTTTACTACGTCTATTTCCTGTTTGGTATAAAGAATTCTTGATCTTCATTTTTAAAGGTTCGCTTTTGTCCAAAAAGGAGGCAGACAATGTTGTTCTCTGCTACTATGACAGAAGAAGTTGATGAGCTCATCAAGCTTTCATTGACTAAACCTTTGCGCCTCTCAGCTGACCCAGCTACCAAGCGGCCAAAAACGTTGACAGAAGAGTAATTTCCAACTTGACTTCTCATCTGGAATTAATTAATTTACTTATTTTTGTAAATAAGTCATATATTAAGCTGAAAGTCTTTTATCTGTTAGGTGACTTTTTAGTTATCAAAAATGTGTATTCCACTTGCAGGGTGGTCAGGTTACGTAGAATGCGTGAAGTGAACCAGGAAGCTGTCCTCCTTGCTCTGTGCTCTAAGACATTTACTTCTAGAGTTATTATATTTAGGTACTGGAATGCAATAAGTTCATGAGCTCTTGCTCAACTTTGTTATTGGATTCTTTTAGTGGGAGGGATGCATCTAATTCATTTACTAGGTAATATATCTGACAGGGTCCATTTTTCAGACTCTTAAAAGCTCGAGAATTTTAACTTTATCATTCCTTTTGTTTTATTATTTTGTTTTCTGTATTGCTTGAGAATTTTAACTAAATCATTTTTTTTTTTGGACCCTTAGTGGAACCAAACAGGCAGCTCATAGACTAAAGATTTTATTTGGCTTAGCTGGCCTTAAAGCCGCCGAGCTTCATGGTAACCTTACCCAAGTTCAGCGTCTTGATGTGAGTGATTTTCTTGTTAATATGTATAATTTTGGAATCATTAAATCAGGATCCTCAGTGTTCCCCTCTCTGATCATTATTTTGATGGTCTTATGTAAGGCCTTGGAACTCTTCAGGAAACAGCAAGTGATTTTCTTATAG

mRNA sequence

ATGCCCAGCCTCAATCAACAAGAACCAAAGGAATCTTTGCGATTACTTACCATCAATTTTTCCAACCGGCGAACGGAAGGGCTTTCAAGAAAGGAGCAAGAGGCTGCCTTAAGATCAATGCCAGATGTGGTTGTGGCCACTCCAGGACGCATGATTGATCATCTACGCAATTCCATGTCTGTGGATTTGGATGATTTAGCCGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCTGAAATTCGTGAATTGGTTCGCTTTTGTCCAAAAAGGAGGCAGACAATGTTGTTCTCTGCTACTATGACAGAAGAAGTTGATGAGCTCATCAAGCTTTCATTGACTAAACCTTTGCGCCTCTCAGCTGACCCAGCTACCAAGCGGCCAAAAACGTTGACAGAAGAGGTGGTCAGGTTACGTAGAATGCGTGAAGTGAACCAGGAAGCTGTCCTCCTTGCTCTGTGCTCTAAGACATTTACTTCTAGAGTTATTATATTTAGTGGAACCAAACAGGCAGCTCATAGACTAAAGATTTTATTTGGCTTAGCTGGCCTTAAAGCCGCCGAGCTTCATGGTAACCTTACCCAAGTTCAGCGTCTTGATGCCTTGGAACTCTTCAGGAAACAGCAAGTGATTTTCTTATAG

Coding sequence (CDS)

ATGCCCAGCCTCAATCAACAAGAACCAAAGGAATCTTTGCGATTACTTACCATCAATTTTTCCAACCGGCGAACGGAAGGGCTTTCAAGAAAGGAGCAAGAGGCTGCCTTAAGATCAATGCCAGATGTGGTTGTGGCCACTCCAGGACGCATGATTGATCATCTACGCAATTCCATGTCTGTGGATTTGGATGATTTAGCCGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCTGAAATTCGTGAATTGGTTCGCTTTTGTCCAAAAAGGAGGCAGACAATGTTGTTCTCTGCTACTATGACAGAAGAAGTTGATGAGCTCATCAAGCTTTCATTGACTAAACCTTTGCGCCTCTCAGCTGACCCAGCTACCAAGCGGCCAAAAACGTTGACAGAAGAGGTGGTCAGGTTACGTAGAATGCGTGAAGTGAACCAGGAAGCTGTCCTCCTTGCTCTGTGCTCTAAGACATTTACTTCTAGAGTTATTATATTTAGTGGAACCAAACAGGCAGCTCATAGACTAAAGATTTTATTTGGCTTAGCTGGCCTTAAAGCCGCCGAGCTTCATGGTAACCTTACCCAAGTTCAGCGTCTTGATGCCTTGGAACTCTTCAGGAAACAGCAAGTGATTTTCTTATAG

Protein sequence

MPSLNQQEPKESLRLLTINFSNRRTEGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDALELFRKQQVIFL
Homology
[Close]
BLAST of Csor.00g138950 vs. ExPASy Swiss-Prot
Match: Q9ZRZ8 (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 PE=2 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.7e-83
Identity = 161/192 (83.85%), Postives = 175/192 (91.15%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLS +EQE  LRSMPD+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL+ GF+ EI
Sbjct: 275 GLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEI 334

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
            ELVR CPKRRQTMLFSATMTEEV EL+KLSL KPLRLSADP+ +RP  LTEEVVR+RR 
Sbjct: 335 TELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRT 394

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           RE NQEAVLL+LC++TF S+VIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQ QRLD+
Sbjct: 395 REANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDS 454

Query: 207 LELFRKQQVIFL 219
           LELFRKQ+V FL
Sbjct: 455 LELFRKQEVDFL 466

[Close]
BLAST of Csor.00g138950 vs. ExPASy Swiss-Prot
Match: Q0INC5 (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0481100 PE=2 SV=2)

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-79
Identity = 152/192 (79.17%), Postives = 174/192 (90.62%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLS K QE ALRSMPD+VVATPGR+IDHLRNS+SV L+DLA+LILDEADRLLELGFSAEI
Sbjct: 302 GLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEI 361

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           +EL+R CP+RRQTMLFSATMTEE++EL+ LSL KP+RL ADP+ KRP TLTEEVVR+RR 
Sbjct: 362 QELIRMCPRRRQTMLFSATMTEEINELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRRA 421

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           RE NQEAVLLALC KTF  +VIIFSGTK +AHRLKI+FGL+G+KAAELHGNLTQ QRL+A
Sbjct: 422 REANQEAVLLALCLKTFKDKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEA 481

Query: 207 LELFRKQQVIFL 219
           LELF+KQ+V FL
Sbjct: 482 LELFKKQEVDFL 493

[Close]
BLAST of Csor.00g138950 vs. ExPASy Swiss-Prot
Match: A1CNV8 (ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=drs1 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.0e-50
Identity = 104/192 (54.17%), Postives = 139/192 (72.40%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           G S +EQE  L+  PDV++ATPGR IDH+RNS S  +D L +L+LDEADR+LE GF+ E+
Sbjct: 414 GFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADEL 473

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
            E++   PK RQTMLFSATMT+ VD+LI++ L +P+RL  D        LT+E VRLR  
Sbjct: 474 NEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEFVRLRPG 533

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           RE  +   LL LCS+ FT RVI+F   K+ AHR++I+FGL GLKAAELHG+++Q QR+ +
Sbjct: 534 REGKRLGYLLYLCSEIFTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIKS 593

Query: 207 LELFRKQQVIFL 219
           +E FR+ +V FL
Sbjct: 594 VESFREGKVAFL 605

[Close]
BLAST of Csor.00g138950 vs. ExPASy Swiss-Prot
Match: P0C2N8 (ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-11 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.5e-49
Identity = 105/192 (54.69%), Postives = 134/192 (69.79%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLS K QEA LR  PDVV+ATPGR IDH+RNS S  +D + +L+LDEADR+LE GF+ E+
Sbjct: 401 GLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADEL 460

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
            E++   PK RQTMLFSATMT  VD LI+  L KP+R+ AD   K   TL +E VRLR  
Sbjct: 461 NEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPG 520

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           RE  +E  LL +C   +T RVIIF   K+ AH+++I+FGL GL  AELHG++ Q QR+ +
Sbjct: 521 RESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQS 580

Query: 207 LELFRKQQVIFL 219
           +E FR  +V FL
Sbjct: 581 VEDFRDGKVNFL 592

[Close]
BLAST of Csor.00g138950 vs. ExPASy Swiss-Prot
Match: Q4WRV2 (ATP-dependent RNA helicase drs1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=drs1 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-49
Identity = 102/192 (53.12%), Postives = 139/192 (72.40%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           G S +EQE  L+  PDV++ATPGR IDH+RNS S  +D L +L+LDEADR+LE GF+ E+
Sbjct: 418 GFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADEL 477

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
            E++   PK RQTMLFSATMT+ VD+LI++ L +P+RL  D        LT+E VRLR  
Sbjct: 478 NEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEFVRLRPG 537

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           RE  +   LL LC++ +T RVI+F   K+ AHR++I+FGL GLKAAELHG+++Q QR+ +
Sbjct: 538 REDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQEQRIKS 597

Query: 207 LELFRKQQVIFL 219
           +E FR+ +V FL
Sbjct: 598 VENFREGKVAFL 609

[Close]
BLAST of Csor.00g138950 vs. NCBI nr
Match: KAG6607623.1 (DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 410 bits (1054), Expect = 5.57e-144
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MPSLNQQEPKESLRLLTINFSNRRTEGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS 60
           MPSLNQQEPKESLRLLTINFSNRRTEGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS
Sbjct: 1   MPSLNQQEPKESLRLLTINFSNRRTEGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS 60

Query: 61  VDLDDLAVLILDEADRLLELGFSAEIRELVRFCPKRRQTMLFSATMTEEVDELIKLSLTK 120
           VDLDDLAVLILDEADRLLELGFSAEIRELVRFCPKRRQTMLFSATMTEEVDELIKLSLTK
Sbjct: 61  VDLDDLAVLILDEADRLLELGFSAEIRELVRFCPKRRQTMLFSATMTEEVDELIKLSLTK 120

Query: 121 PLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRL 180
           PLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRL
Sbjct: 121 PLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRL 180

Query: 181 KILFGLAGLKAAELHGNLTQVQRLDALELFRKQQVIFL 218
           KILFGLAGLKAAELHGNLTQVQRLDALELFRKQQVIFL
Sbjct: 181 KILFGLAGLKAAELHGNLTQVQRLDALELFRKQQVIFL 218

[Close]
BLAST of Csor.00g138950 vs. NCBI nr
Match: KAG7025080.1 (DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (897), Expect = 6.20e-115
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 87  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 146

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEE+DELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 147 RELVRLCPKRRQTMLFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 206

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLLALCSKTFTS+ IIFSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 207 REVNQEAVLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 266

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV +L
Sbjct: 267 LELFRKQQVDYL 278

[Close]
BLAST of Csor.00g138950 vs. NCBI nr
Match: XP_011652411.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis sativus])

HSP 1 Score: 349 bits (896), Expect = 1.27e-114
Identity = 185/192 (96.35%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 106 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 165

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEEV+ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 166 RELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 225

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLL+LCSKTFTS+VI+FSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 226 REVNQEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 285

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV FL
Sbjct: 286 LELFRKQQVDFL 297

[Close]
BLAST of Csor.00g138950 vs. NCBI nr
Match: XP_016903576.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo])

HSP 1 Score: 349 bits (896), Expect = 1.27e-114
Identity = 185/192 (96.35%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 106 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 165

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEEV+ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 166 RELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 225

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLL+LCSKTFTS+VI+FSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 226 REVNQEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 285

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV FL
Sbjct: 286 LELFRKQQVDFL 297

[Close]
BLAST of Csor.00g138950 vs. NCBI nr
Match: XP_022157812.1 (DEAD-box ATP-dependent RNA helicase 28 [Momordica charantia])

HSP 1 Score: 353 bits (905), Expect = 2.53e-114
Identity = 188/192 (97.92%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 242 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 301

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 302 RELVRLCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 361

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLLALCSKTFTS+VIIFSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 362 REVNQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 421

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV FL
Sbjct: 422 LELFRKQQVEFL 433

[Close]
BLAST of Csor.00g138950 vs. ExPASy TrEMBL
Match: A0A1S4E5Q7 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503953 PE=3 SV=1)

HSP 1 Score: 349 bits (896), Expect = 6.14e-115
Identity = 185/192 (96.35%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 106 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 165

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEEV+ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 166 RELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 225

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLL+LCSKTFTS+VI+FSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 226 REVNQEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 285

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV FL
Sbjct: 286 LELFRKQQVDFL 297

[Close]
BLAST of Csor.00g138950 vs. ExPASy TrEMBL
Match: A0A6J1DVH7 (DEAD-box ATP-dependent RNA helicase 28 OS=Momordica charantia OX=3673 GN=LOC111024428 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 1.23e-114
Identity = 188/192 (97.92%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 242 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 301

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 302 RELVRLCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 361

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLLALCSKTFTS+VIIFSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 362 REVNQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 421

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV FL
Sbjct: 422 LELFRKQQVEFL 433

[Close]
BLAST of Csor.00g138950 vs. ExPASy TrEMBL
Match: A0A6J1F9Y6 (DEAD-box ATP-dependent RNA helicase 28 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443445 PE=3 SV=1)

HSP 1 Score: 350 bits (897), Expect = 5.99e-114
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 249 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 308

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEE+DELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 309 RELVRLCPKRRQTMLFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 368

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLLALCSKTFTS+ IIFSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 369 REVNQEAVLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 428

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV +L
Sbjct: 429 LELFRKQQVDYL 440

[Close]
BLAST of Csor.00g138950 vs. ExPASy TrEMBL
Match: A0A6J1F947 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443445 PE=3 SV=1)

HSP 1 Score: 350 bits (897), Expect = 2.23e-113
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 249 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 308

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEE+DELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 309 RELVRLCPKRRQTMLFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 368

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLLALCSKTFTS+ IIFSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 369 REVNQEAVLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 428

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV +L
Sbjct: 429 LELFRKQQVDYL 440

[Close]
BLAST of Csor.00g138950 vs. ExPASy TrEMBL
Match: A0A0A0LIW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855940 PE=3 SV=1)

HSP 1 Score: 349 bits (896), Expect = 2.34e-113
Identity = 185/192 (96.35%), Postives = 189/192 (98.44%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI
Sbjct: 243 GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 302

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           RELVR CPKRRQTMLFSATMTEEV+ELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM
Sbjct: 303 RELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 362

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           REVNQEAVLL+LCSKTFTS+VI+FSGTKQAAHRLKILFGLAG KAAELHGNLTQVQRLDA
Sbjct: 363 REVNQEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDA 422

Query: 207 LELFRKQQVIFL 218
           LELFRKQQV FL
Sbjct: 423 LELFRKQQVDFL 434

[Close]
BLAST of Csor.00g138950 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 308.1 bits (788), Expect = 5.5e-84
Identity = 161/192 (83.85%), Postives = 175/192 (91.15%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           GLS +EQE  LRSMPD+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL+ GF+ EI
Sbjct: 275 GLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEI 334

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
            ELVR CPKRRQTMLFSATMTEEV EL+KLSL KPLRLSADP+ +RP  LTEEVVR+RR 
Sbjct: 335 TELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRT 394

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
           RE NQEAVLL+LC++TF S+VIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQ QRLD+
Sbjct: 395 REANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDS 454

Query: 207 LELFRKQQVIFL 219
           LELFRKQ+V FL
Sbjct: 455 LELFRKQEVDFL 466

[Close]
BLAST of Csor.00g138950 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-21
Identity = 62/185 (33.51%), Postives = 99/185 (53.51%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           G+ R +Q  AL   P V+VATPGR+ DH+ ++    L  L  L+LDEADRLL   F   +
Sbjct: 126 GIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSL 185

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
            +++   P  R+T LFSATMT++V +L +  L  P+++ A        TL ++    R +
Sbjct: 186 NQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQ---YRFV 245

Query: 147 REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLDA 206
               ++  L+ + S+   S  +IF+ T      L ++    G +A  + G +TQ +RL A
Sbjct: 246 AAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGA 305

Query: 207 LELFR 212
           L  F+
Sbjct: 306 LNKFK 307

[Close]
BLAST of Csor.00g138950 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-20
Identity = 56/187 (29.95%), Postives = 103/187 (55.08%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           G +R+ +   + S  ++V+ATPGR++DHL+N+ +     L  L++DEADR+LE  F  ++
Sbjct: 198 GNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDM 257

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
            ++++  PK RQT LFSAT T +V +L ++SLT P+ +  D    R K   E + +   +
Sbjct: 258 NKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDG--RRKVTNEGLEQGYCV 317

Query: 147 REVNQEAVLL-ALCSKTFTSRVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLD 206
               Q  +LL +   K    ++++F  T ++      +  ++ +  +++HG + Q +R  
Sbjct: 318 VPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTK 377

Query: 207 ALELFRK 213
               F K
Sbjct: 378 TFFDFMK 382

[Close]
BLAST of Csor.00g138950 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 92.0 bits (227), Expect = 6.2e-19
Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = 0 

Query: 27  GLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEI 86
           G  RK +   L    +++VATPGR++DHL N+      +L  L++DEADR+LE  F  ++
Sbjct: 263 GEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDL 322

Query: 87  RELVRFCPKRRQTMLFSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRM 146
           ++++   PK RQT LFSAT + +V++L ++SLT P+ +  D   K               
Sbjct: 323 KKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRK--------------- 382

Query: 147 REVNQEAVLLALCSKTFTSRVI-IFSGTKQAAHRLKILFGLAGLKAAELHGNLTQVQRLD 206
            EV  E +    C      R++ + +  K+   + KI+   +  K+ + H  L +  + D
Sbjct: 383 -EVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFD 430

Query: 207 ALEL 210
            LE+
Sbjct: 443 CLEI 430

[Close]
BLAST of Csor.00g138950 vs. TAIR 10
Match: AT5G54910.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 88.6 bits (218), Expect = 6.8e-18
Identity = 55/181 (30.39%), Postives = 101/181 (55.80%), Query Frame = 0 

Query: 42  DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRFCPKRRQTML 101
           +++V  PGR++ H+  + + +   L +LILDEADR+L+  F  ++  ++   PK RQT+L
Sbjct: 195 NILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLL 254

Query: 102 FSATMTEEVDELIKLSLTKP--LRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALC 161
           FSAT T++V +L +LSL  P  + + A+  T  P +L + V+ +   ++++   +L +  
Sbjct: 255 FSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLD---MLWSFI 314

Query: 162 SKTFTSRVIIFSGTKQAAHRLKILFG--LAGLKAAELHGNLTQVQRLDALELF-RKQQVI 218
                SR+++F  TK+    +   F     G+    LHG ++Q +R+     F  +Q V+
Sbjct: 315 KTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQSVL 372

The following BLAST results are available for this feature:
BLAST of Csor.00g138950 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZRZ87.7e-8383.85DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 P... [more]
Q0INC51.0e-7979.17DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
A1CNV85.0e-5054.17ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS ... [more]
P0C2N82.5e-4954.69ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR2... [more]
Q4WRV23.3e-4953.13ATP-dependent RNA helicase drs1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ... [more]
BLAST of Csor.00g138950 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6607623.15.57e-144100.00DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. s... [more]
KAG7025080.16.20e-11596.35DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. a... [more]
XP_011652411.11.27e-11496.35DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis sativus][more]
XP_016903576.11.27e-11496.35PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo][more]
XP_022157812.12.53e-11497.92DEAD-box ATP-dependent RNA helicase 28 [Momordica charantia][more]
BLAST of Csor.00g138950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E5Q76.14e-11596.35DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1DVH71.23e-11497.92DEAD-box ATP-dependent RNA helicase 28 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1F9Y65.99e-11496.35DEAD-box ATP-dependent RNA helicase 28 isoform X3 OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1F9472.23e-11396.35DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucurbita moschata OX=3662 ... [more]
A0A0A0LIW32.34e-11396.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855940 PE=3 SV=1[more]
BLAST of Csor.00g138950 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G16630.15.5e-8483.85DEA(D/H)-box RNA helicase family protein [more]
AT5G60990.16.6e-2133.51DEA(D/H)-box RNA helicase family protein [more]
AT3G18600.17.3e-2029.95P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT5G65900.16.2e-1930.43DEA(D/H)-box RNA helicase family protein [more]
AT5G54910.16.8e-1830.39DEA(D/H)-box RNA helicase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 10..128
e-value: 4.0E-33
score: 116.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 129..218
e-value: 2.2E-10
score: 42.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 25..217
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 25..113
e-value: 5.0E-19
score: 68.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 155..217
e-value: 5.1E-6
score: 26.8
NoneNo IPR availablePANTHERPTHR24031:SF729BNAA01G17110D PROTEINcoord: 27..50
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 75..218
NoneNo IPR availablePANTHERPTHR24031:SF729BNAA01G17110D PROTEINcoord: 75..218
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 27..50
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 70..78
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..124
score: 18.997072

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g138950.m01Csor.00g138950.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005730 nucleolus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003724 RNA helicase activity