Csor.00g138350 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g138350
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUbiquitin-conjugating enzyme, E2
LocationCsor_Chr12: 1406850 .. 1410610 (-)
RNA-Seq ExpressionCsor.00g138350
SyntenyCsor.00g138350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTAAGCGACTAGAATTAGTTATATTGCTTTTTCTTGATTTTTGTGTCATCTGAAAGTAGATACACTTATGATATTTACCGTGAATATAATGACCTTACAGCCATAACTTGCGTTTTGCTATGAGAAGTGTTACTCATTTGGAATGCGGGAGTTGAGTTCATTTTGTTAATGGATGATTTGCAATGTTTCGAGTATATATTAACTGACAATGTGTAGAACTACTAACTTTTGTAATTGATTGATCTTCCATTTCGTTTAACGTTACGGTGTTCTTTATCTCGTGGATATTTGTTTTGAACCTATAATCCTGCAAAGATAAATGTCAATATGAGCGTAGTTTGAGTAGTTGTTTATTAGTATCTACTTTATGAGCGGTAGGTTCTAAAATTTTCTCATTTATAATGTAATATTGTCAAAATCTATCAAGTTAGGCGTTTTTCCTCGTTGTGGTTTCATTGAAATTTATCTTGGCTATTCAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTGAGGAATCGAGCTTTTAAGAACAATGAAAAAATGACCACGGCATACAAAGAACCAAGCCTGCAAAAAAGGAGTCCACCCATTAACTGTGAGATCCCACGTTTATTGGAGAGGGGAATGAAGCATTCCTTTTAATGATGTCGAAACCTCTCCATAGAAGATGCGTTTTAAAACTTGAGGGGAGGCTTGGAAGGGAAAGCCCAAAGAGGAGAATATCTGCTAGGGGTGGACTTGGGTTGTTACAAATGGTATCAAAGTCAGACACAGGGCGGTGTGCCAGCGAGGACGTCGAGCTCCCAAGGGGGTGGATTGTGAGATCCCATATTGATTGGAGAGGGGAAAGAAGCATTCCTAAAATTGTCGAAACTTCTCCCTAGCATATGGTTTTAAAACGTTGAGGGGAAGTCCGGAAGGGAATGCCCAAAGAGGACAGTATCTGCTAGTGATGGGCTTGGGCTGTTACATTAACTATTGAAAAAAAGATTCCAATCGAAAAGGATTAAACCAATCTTATAATTACAAAGGGCTTAAGTAACAGATGGCCACAAGGATACATTAAAAACCTAGCAAATTCCCAGACCTCCCACAGTCTCTCCACCTCCCTAAAAGTTTACTGTTTCTCTCAATTCGAATTCTCCATTTTACAACAAAGAAACAAGTCTGCCACAAAACTTTATCCTTATCATAGCACTACGATCCTTACCTCGAGTCAAACATAGCCTCGAGCCTAACATATAGCCTTGAGCAGTTCAAGTTTGATTTCATTCCATGTCTGAACTTCTGCTGATTCTTTCTTCCTCATTCCCTTATGGAAAGTACATAAGTCTCTGTTTAGTGGTGATCAATAACAGTATGCAGTATTTGGGTTTTCTTCAAAGCTTTTATATTTTTGGATTCATCTGCATTTTTTTTAATGTGATTGTATGATAGTAAATTTCTACCTCATATTTGTCCATAATCATAGAAAACTAATTTTCTTTTATGTCGGGGTTGATTTTAATTACCTTCATGCTGATTTGTTACTGAACAGCTATTATGATTAAAAGTTGCAAATAGATATTAGCTTCCAGAAATTTATTGACTGTTCTATTTACTTGAACTGCATCGAGAATTTATATAGCGGTTTTGTAGGCCTCAAGAGCAAGGTTGTTCAAGGAGTACAAAGAGGTTCAAAGAGAAAAGGTAGCAGATCCGGATATTCAATTGGTTTGTGATGATTCCAATATTTTTAAATGGACAGCCCTAATCAAGGTAATGCTCTCAACGATCCCGATATAAAACCGAGTTAAGAGTTGTTTCTTACGGTGATTGATATGCATTATATTTAGGGACCGTCAGAGACTCCTTTTGAGGGCGGTGTTTTTCAGCTTGCCTTTTCGGTGCCTGAGCAATATCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAATCTTTCATCCAAACGTTCATTTCAAGGTAGAAGTCAACTTGATCTTTTTCTAAATTGTGGGTTGACTCTGAGCCCTTCTGTCGCAATGGTTAATATTATTAACTATAGTTGGCTAATAGCTGCATTATATCCCATAGTATCTCGACTCGAAATAATCTGTATTAGATCCGACTAATTTTCCACCAACAAGATTGTGATAGGGATTATAAGAAGACGATCATTGGGGAGGAAAGGGAAACGCTAAGGAGGGGGTACCGCTGTCCAAGGGATAGTAGTTAGCAGCAGGATTTAGGTCTCTCTTAACTAAACAAATAAATGCTTAGCCTCCATATCAGTCACTTTGGGGTCAGATGGTTGTCCTTTGAGAATAGTTGAGGTGCACACAAGCCGGCCTGTACACTCTTGGATATATAAAAAATATATTAAAAAATCTTATGGATTCTAGGGAGGTGTAACGATGAAATGAATCAATTTAATGAAACAACCGGTGTGGTGTTCGGGTTTGGAGAAGAGTTTAAATACTTGTCATGAAATGACCGATATAAGGTTGAAAACCCTAGCGAATCCACCGGGTCGAAATGGAGTCCATCAAAAGTTGACAAACCCTATAGGACAAGGTGGAGTTGCAATTAGGGTGAATATTTTTATGGGTGAGTTTGATGATGACCTCTCCGCTCGAGATGGGGGAGTAGGAAGCTAGATGCACTCATGTTTTATGGCGAGGATTCGAAGCGTTGGACATCCATTTGAGTGAATTCTGGTTGCGGAAGCTGCAGCCTCGAGGGAGAGTTTACAGTGTTCTTCATCCATATGAGTGAATTCTGAACTTTTCAGTTGTTGAACCATACTTTACATTTGTCTCTGTATCTTCCTGCAGACGGGCGAGATCTGCCTCGATATACTGAAGAACGCGTGGAGCCCAGCATGGACTCTGCAGTCTGTTTGTAGGGCTATAATTGCTTTGATGGCTCATCCCGAACCTGATAGCCCGCTAAACTGTGATTCTGGTGAGTTTACATGGATTCTTTATGATGAATTTTTCTGATTTACATGTTTATTTACTGGGATCTGTTTGATGATGTGATAAAACTGGTTCTGGTGGGCAACTGAATTTTTGGAGTTCGTTATTCTAAAATTTCTTTTCTGGAGAATTCCCTCCGAGCTAGACGGTTTTGGTGGGTCAGGTTGGCCTGGGTCCTGGCCAACACTGATGTAAACTAACCCATCGATTTAGGAAAATACGAACTCACTAAGACTGAACTAAGTCGATCAACTAATGTTCAGTTATATATTTTGAAATTGAATCGACTGATAACGTTTTATAGTAAACGAGATATTAGGGATCTATTCTTTGCATTACTGATGATCCACAAGCAAGGTAAGTAGGTCCATTACCAGCCAGCTCCAGAACGAAAGACCGAACGGAGTAACCGTGGTAACTAGGCTTAGATTTTAAATTACTAAGACCTGGTTGGTATCAATTTGGTTTTTGGCTCAGGAGTTATGAAAAATTAAACTTATAAACACTATTTTCACTTGTGTGGACTTTCCTCTTGGAGGTAAACTGATTGATCCTTGTTGCTCGGTTTCACGAACTTTTTCGATACGAAACTCATGCATATATAAAGTAATGCATTTTCGAGAGGCGGTTGCCATTGACCTTCTAATCTTTCTAATTGATTGCGTGGGTGTTTATAGGAAATCTTCTGCGTTCGGGCGATGTTCGAGGATATCAATCCATGGCAAGGATGTACACAAGGCTTGCTGCAATGCCCAAAAAGGGCTGA

mRNA sequence

ATGCAGGCCTCAAGAGCAAGGTTGTTCAAGGAGTACAAAGAGGTTCAAAGAGAAAAGGTAGCAGATCCGGATATTCAATTGGTTTGTGATGATTCCAATATTTTTAAATGGACAGCCCTAATCAAGGGACCGTCAGAGACTCCTTTTGAGGGCGGTGTTTTTCAGCTTGCCTTTTCGGTGCCTGAGCAATATCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAATCTTTCATCCAAACGTTCATTTCAAGACGGGCGAGATCTGCCTCGATATACTGAAGAACGCGTGGAGCCCAGCATGGACTCTGCAGTCTGTTTGTAGGGCTATAATTGCTTTGATGGCTCATCCCGAACCTGATAGCCCGCTAAACTGTGATTCTGGAAATCTTCTGCGTTCGGGCGATGTTCGAGGATATCAATCCATGGCAAGGATGTACACAAGGCTTGCTGCAATGCCCAAAAAGGGCTGA

Coding sequence (CDS)

ATGCAGGCCTCAAGAGCAAGGTTGTTCAAGGAGTACAAAGAGGTTCAAAGAGAAAAGGTAGCAGATCCGGATATTCAATTGGTTTGTGATGATTCCAATATTTTTAAATGGACAGCCCTAATCAAGGGACCGTCAGAGACTCCTTTTGAGGGCGGTGTTTTTCAGCTTGCCTTTTCGGTGCCTGAGCAATATCCTTTGCAACCTCCTCAAGTGCGGTTCTTAACGAAAATCTTTCATCCAAACGTTCATTTCAAGACGGGCGAGATCTGCCTCGATATACTGAAGAACGCGTGGAGCCCAGCATGGACTCTGCAGTCTGTTTGTAGGGCTATAATTGCTTTGATGGCTCATCCCGAACCTGATAGCCCGCTAAACTGTGATTCTGGAAATCTTCTGCGTTCGGGCGATGTTCGAGGATATCAATCCATGGCAAGGATGTACACAAGGCTTGCTGCAATGCCCAAAAAGGGCTGA

Protein sequence

MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Homology
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BLAST of Csor.00g138350 vs. ExPASy Swiss-Prot
Match: Q8LGF7 (Protein PEROXIN-4 OS=Arabidopsis thaliana OX=3702 GN=PEX4 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-86
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQL+CDD+NIFKWTALIKGPSETP+EGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 158
           DSPLNCDSGNLLRSGDVRG+ SMA+MYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. ExPASy Swiss-Prot
Match: Q86IZ3 (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum OX=44689 GN=pex4 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-51
Identity = 91/145 (62.76%), Postives = 119/145 (82.07%), Query Frame = 0 

Query: 6   ARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYP 65
           ARL KEYK +Q E+  D  +    D+S++++W A+IKGP +TP+E G F+L  SVP  YP
Sbjct: 3   ARLMKEYKVLQNEEFED-ILLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYP 62

Query: 66  LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
           LQPP ++F+TKIFHPN+HFKTGEICLD+LK +WS  +TLQSVCR+IIAL++ PE DSPLN
Sbjct: 63  LQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLN 122

Query: 126 CDSGNLLRSGDVRGYQSMARMYTRL 151
           CD+GNL+R+GDV+G+ S+ARMYTRL
Sbjct: 123 CDAGNLIRNGDVKGHDSLARMYTRL 146

[Close]
BLAST of Csor.00g138350 vs. ExPASy Swiss-Prot
Match: Q9P6I1 (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc16 PE=3 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-35
Identity = 73/155 (47.10%), Postives = 98/155 (63.23%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           M +S  RL KEY   Q   ++   +     D ++F W A+I+GP+ETP+EGG + L   V
Sbjct: 1   MNSSIKRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
            E YP+ PP V F TKI HPN+ +  GE+C+DILK  WSPAW+LQS C AII+L+++ + 
Sbjct: 61  HEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDA 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPK 156
            SPLN D+  LLR+GD   Y S+ R  T L A  K
Sbjct: 121 SSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKGK 155

[Close]
BLAST of Csor.00g138350 vs. ExPASy Swiss-Prot
Match: O60015 (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta OX=870730 GN=PEX4 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32
Identity = 69/176 (39.20%), Postives = 100/176 (56.82%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPD-------IQLVCDDSNIFKWTALIKGPSETPFEGGV 60
           M ++  RL KEY+ V++E             + L   +  +F+W+A+I+GP ++PFE  +
Sbjct: 1   MSSTEKRLLKEYRAVKKELTEKRSPIHDTGIVDLHPLEDGLFRWSAVIRGPDQSPFEDAL 60

Query: 61  FQLAFSVPEQYPLQPPQVRFLT----------------------KIFHPNVHFKTGEICL 120
           ++L   +P  YPL PP+++F+                       K+ HPNV+FKTGEICL
Sbjct: 61  WKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICL 120

Query: 121 DILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMY 148
           DIL+  WSPAWTLQS   AI+ L+A+PEP SPLN D  NLL+  D   Y+ +   Y
Sbjct: 121 DILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTAYKDLVHYY 176

[Close]
BLAST of Csor.00g138350 vs. ExPASy Swiss-Prot
Match: Q9EQX9 (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.1e-28
Identity = 66/147 (44.90%), Postives = 95/147 (64.63%), Query Frame = 0 

Query: 7   RLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPL 66
           R+ KE + +  E V  P I+   D+SN   +  +I GP ++PFEGG F+L   +PE+YP+
Sbjct: 7   RIIKETQRLLAEPV--PGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPM 66

Query: 67  QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
             P+VRF+TKI+HPNV  K G ICLDILK+ WSPA  +++V  +I AL++ P PD PL  
Sbjct: 67  AAPKVRFMTKIYHPNVD-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAN 126

Query: 127 DSGNLLRSGDVRGYQSMARMYTRLAAM 154
           D     +S + +  ++ AR +TRL AM
Sbjct: 127 DVAEQWKSNEAQAIET-ARAWTRLYAM 149

[Close]
BLAST of Csor.00g138350 vs. NCBI nr
Match: XP_022950978.1 (protein PEROXIN-4 [Cucurbita moschata] >XP_022950979.1 protein PEROXIN-4 [Cucurbita moschata] >XP_022950980.1 protein PEROXIN-4 [Cucurbita moschata] >XP_023002537.1 protein PEROXIN-4 [Cucurbita maxima] >XP_023002538.1 protein PEROXIN-4 [Cucurbita maxima] >XP_023536751.1 protein PEROXIN-4 [Cucurbita pepo subsp. pepo] >KAG6585396.1 Protein PEROXIN-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020312.1 Protein PEROXIN-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327 bits (838), Expect = 4.61e-113
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. NCBI nr
Match: XP_022131340.1 (protein PEROXIN-4 [Momordica charantia] >CAA2934805.1 PEROXIN-4 [Olea europaea subsp. europaea])

HSP 1 Score: 327 bits (837), Expect = 6.55e-113
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGD+RGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. NCBI nr
Match: KAG8375569.1 (hypothetical protein BUALT_Bualt10G0114200 [Buddleja alternifolia])

HSP 1 Score: 326 bits (835), Expect = 1.32e-112
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLR+GDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRAGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. NCBI nr
Match: XP_016900089.1 (PREDICTED: protein PEROXIN-4 [Cucumis melo])

HSP 1 Score: 326 bits (835), Expect = 1.32e-112
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAF+V
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFAV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. NCBI nr
Match: AFK37806.1 (unknown [Lotus japonicus])

HSP 1 Score: 325 bits (834), Expect = 1.88e-112
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREK ADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKTADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. ExPASy TrEMBL
Match: A0A6J1KTV6 (protein PEROXIN-4 OS=Cucurbita maxima OX=3661 GN=LOC111496350 PE=3 SV=1)

HSP 1 Score: 327 bits (838), Expect = 2.23e-113
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. ExPASy TrEMBL
Match: A0A6J1GHB1 (protein PEROXIN-4 OS=Cucurbita moschata OX=3662 GN=LOC111453964 PE=3 SV=1)

HSP 1 Score: 327 bits (838), Expect = 2.23e-113
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. ExPASy TrEMBL
Match: A0A6J1BPF8 (protein PEROXIN-4 OS=Momordica charantia OX=3673 GN=LOC111004594 PE=3 SV=1)

HSP 1 Score: 327 bits (837), Expect = 3.17e-113
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGD+RGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. ExPASy TrEMBL
Match: A0A1S4DVS9 (protein PEROXIN-4 OS=Cucumis melo OX=3656 GN=LOC103488194 PE=3 SV=1)

HSP 1 Score: 326 bits (835), Expect = 6.40e-113
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAF+V
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFAV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. ExPASy TrEMBL
Match: I3SC14 (UBC core domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 325 bits (834), Expect = 9.10e-113
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREK ADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKTADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157
           DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. TAIR 10
Match: AT5G25760.1 (peroxin4 )

HSP 1 Score: 319.3 bits (817), Expect = 1.7e-87
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQL+CDD+NIFKWTALIKGPSETP+EGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 158
           DSPLNCDSGNLLRSGDVRG+ SMA+MYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. TAIR 10
Match: AT5G25760.2 (peroxin4 )

HSP 1 Score: 319.3 bits (817), Expect = 1.7e-87
Identity = 150/157 (95.54%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MQASRARLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSV 60
           MQASRARLFKEYKEVQREKVADPDIQL+CDD+NIFKWTALIKGPSETP+EGGVFQLAFSV
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60

Query: 61  PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
           PE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61  PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120

Query: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 158
           DSPLNCDSGNLLRSGDVRG+ SMA+MYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157

[Close]
BLAST of Csor.00g138350 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 0 

Query: 7   RLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPL 66
           R+ KE K++Q++         V +D  +F W A I GPSE+P+ GGVF +    P  YP 
Sbjct: 5   RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 64

Query: 67  QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
           +PP+V F TK+FHPN++   G ICLDILK  WSPA T+  V  +I +L+  P PD PL  
Sbjct: 65  KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 124

Query: 127 DSGNLLRSGDVRGYQSMARMYTRLAAM 154
           +  ++ ++ D   Y+S AR +T+  AM
Sbjct: 125 EIAHMYKT-DKNKYESTARSWTQKYAM 147

[Close]
BLAST of Csor.00g138350 vs. TAIR 10
Match: AT5G53300.2 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 0 

Query: 7   RLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPL 66
           R+ KE K++Q++         V +D  +F W A I GPSE+P+ GGVF +    P  YP 
Sbjct: 5   RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 64

Query: 67  QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
           +PP+V F TK+FHPN++   G ICLDILK  WSPA T+  V  +I +L+  P PD PL  
Sbjct: 65  KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 124

Query: 127 DSGNLLRSGDVRGYQSMARMYTRLAAM 154
           +  ++ ++ D   Y+S AR +T+  AM
Sbjct: 125 EIAHMYKT-DKNKYESTARSWTQKYAM 147

[Close]
BLAST of Csor.00g138350 vs. TAIR 10
Match: AT5G53300.4 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 62/147 (42.18%), Postives = 89/147 (60.54%), Query Frame = 0 

Query: 7   RLFKEYKEVQREKVADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPL 66
           R+ KE K++Q++         V +D  +F W A I GPSE+P+ GGVF +    P  YP 
Sbjct: 5   RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 64

Query: 67  QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
           +PP+V F TK+FHPN++   G ICLDILK  WSPA T+  V  +I +L+  P PD PL  
Sbjct: 65  KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 124

Query: 127 DSGNLLRSGDVRGYQSMARMYTRLAAM 154
           +  ++ ++ D   Y+S AR +T+  AM
Sbjct: 125 EIAHMYKT-DKNKYESTARSWTQKYAM 147

The following BLAST results are available for this feature:
BLAST of Csor.00g138350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LGF72.4e-8695.54Protein PEROXIN-4 OS=Arabidopsis thaliana OX=3702 GN=PEX4 PE=1 SV=1[more]
Q86IZ31.1e-5162.76Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum OX=44689 GN=pex... [more]
Q9P6I11.9e-3547.10Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
O600151.5e-3239.20Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta OX=870730 GN=PEX4 PE=1 ... [more]
Q9EQX95.1e-2844.90Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus OX=10116 GN=Ube2n PE=1 SV... [more]
BLAST of Csor.00g138350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950978.14.61e-113100.00protein PEROXIN-4 [Cucurbita moschata] >XP_022950979.1 protein PEROXIN-4 [Cucurb... [more]
XP_022131340.16.55e-11399.36protein PEROXIN-4 [Momordica charantia] >CAA2934805.1 PEROXIN-4 [Olea europaea s... [more]
KAG8375569.11.32e-11299.36hypothetical protein BUALT_Bualt10G0114200 [Buddleja alternifolia][more]
XP_016900089.11.32e-11299.36PREDICTED: protein PEROXIN-4 [Cucumis melo][more]
AFK37806.11.88e-11299.36unknown [Lotus japonicus][more]
BLAST of Csor.00g138350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KTV62.23e-113100.00protein PEROXIN-4 OS=Cucurbita maxima OX=3661 GN=LOC111496350 PE=3 SV=1[more]
A0A6J1GHB12.23e-113100.00protein PEROXIN-4 OS=Cucurbita moschata OX=3662 GN=LOC111453964 PE=3 SV=1[more]
A0A6J1BPF83.17e-11399.36protein PEROXIN-4 OS=Momordica charantia OX=3673 GN=LOC111004594 PE=3 SV=1[more]
A0A1S4DVS96.40e-11399.36protein PEROXIN-4 OS=Cucumis melo OX=3656 GN=LOC103488194 PE=3 SV=1[more]
I3SC149.10e-11399.36UBC core domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
BLAST of Csor.00g138350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G25760.11.7e-8795.54peroxin4 [more]
AT5G25760.21.7e-8795.54peroxin4 [more]
AT5G53300.11.1e-2842.18ubiquitin-conjugating enzyme 10 [more]
AT5G53300.21.1e-2842.18ubiquitin-conjugating enzyme 10 [more]
AT5G53300.41.1e-2842.18ubiquitin-conjugating enzyme 10 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 6..153
e-value: 6.8E-53
score: 191.7
NoneNo IPR availablePANTHERPTHR24068:SF383BNAA09G04490D PROTEINcoord: 3..157
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..157
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 7..147
e-value: 3.6E-46
score: 156.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 3..153
score: 52.317898
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..148
e-value: 1.23166E-55
score: 169.69
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..152
e-value: 1.2E-52
score: 179.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 4..153
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 78..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g138350.m01Csor.00g138350.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity