Csor.00g138280 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g138280
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTranslation initiation factor IF-2
LocationCsor_Chr12: 1369330 .. 1372267 (-)
RNA-Seq ExpressionCsor.00g138280
SyntenyCsor.00g138280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTTTTCCCAAATCCGAGGTACCCATTTAGCAAGATTTATGGTTTATTATTGTCTGATTCAGATTTAGCTTCCGCGAATTGGGGATTTTGTGTTTGTCTGGTTGGATTAATGTTTTGTAACGCATCTAATTTGTCGATTGGTAACCGTAGCGGATTTGGGGCAATTGAAATTTGGATTATTCCGATTGGGCAATTAGGTTTAGATTCTAAGTGGGGTTGTTTGTTTTCTTCTTGGAAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTACTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGGTTTGTATGTTTTTTTCCTTGTTTGTTTTTAGTTTATGTTATTGATGAACTCATCATTGTTGTCGTGTTTGTATGTTGGTGAGCAGAGAGAGCCGCTTCGGATATTTTATGAATCCTTGTCGAAACAGATATCAACAAGTGAAATGGCAGAATTTTGGTGCGGTTTGTTTTCTGATATTCTTTTGAGCATTCATTGTCTGTTTAATCCTTTGACTTCTTCATTGTTGTCGTGTTTGTATGTGATCCTTTGGTTTATGATACTCTGTGTTAGCATTTGGTTTGATGCTTCCTCAATCGTGCTGTTGTGAGTGCTTTTCGTAGCAGTCGGTTTCGTTTTGTTTGACGAAAAGGTAGTGGTACTAGTGAAATCGGACGACGTTTGTGAGATCCCATATGGGTTGGGGAGGAGAACGAAGTATTCTTTATAAGGGTGTAGAAATCTCTTCCTAACAGACGCGTTTTAAAACCTAGAGGGGAAACTCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGATGTTACAAATGGTATTAGAGTCAGACATCGGGCGATATGTCAGTGAGGAGGCTGAACCCCGAAGGGGGTGGACACAAGTCAGTGTGCCAGCAAGGACTCTAGACCCTGGGGGATGGGTTGGGGGGTCTCACATCGATTAGAGAAGGAAACGAGTGTCAACGAGGACGCTGGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGGAGACGCGTTTTAAAACTTTGAGGGGAAGTCTGGAAGGGAAAGCTCAAAAACGACAATATCTGGGCTGTGAGTTTTTTTTCACTACTAAAATTGCTAGATTTGAATTATAGGGACTAAATGCAACGAAGGCATACGCGAGCGGTTGATTTTTAGGGGTAGATGTGTTATGTCGAACAACTTTACGACTCAACTAAGTAGTTCCTTTTGGTTTGGGTTATTCCATGTTTCGAGACTTGGTTGATATTTTGGTAACTTGGACAAGATGAACTATTGGATTAAGACTGAACTTTTTATGTCTGATTTGAACGTTGGGACAACTTGCTAGCCCATATCGATTGAGGAGGAGAACAAAACATTCTTTATAAAGGTGTGGAAACCTCTCCTTAATAGACGCGTTTTAAAAACCTTGAGGGGAACCCTGGAAGAGAAAGCCCAAAGAGGACAATATCAGCTAGCGGTAGGCTTACGCTTGTCCTTCGCCTGCATCTGATCCTATAAGGCGTGCAATGTGTTGTTTATTGACGTGTAGATGGCATGTTGTTCTAATAGCATAGGTTTTTTTTTTTTTTCTTGGAAGTTAATGTTATATTTAGTGTTGCAACCATATTGTTATATATGGACCTCAAGGGGTGGTCTTTCGTGGATAAGGGCTATAGTGAGCTCACGGAACGATGTTTCGGTGGAAGGGTTTCTCTTTTCCACCCCGAACAAGGTTGTCATTCAAAGATGGTTGAGTCATCTGTCAATAGAATCCTCAAGTGTCGAATAAAGAAGTTGTGAGTCTCGAAGGTATAATCAAAAGTAACTCAAGTGTTAAACAAATAGTATAGTTTGTTCGAGGGCTCCAAAGAAGGAGTCGAACCTCGATTAAGGGGAGGCTATTCGAGGGTTCCATAAGCCTCAGGGGAGTCTCTATGGTGTACTTTGTACGAGGGGAGGATTCTTGAAGCCTCGTTTAAGGGGAAGCTATTCGAAGGATCCATAAGCCTCAGGGGAGGCTCTATAGTGTATTTTGTTCGATTGGAGGATCGTTGAGGATTGTTGGAAGGGAGTCCCGTATTAGCTAATTAAAGCGATGATCATGGGTTAATAAGTACGAAATATATTTTCATTGGTACAAGGCTTTTTTGAGAAACCAAAAGTAAAGTGACGAGAGCTTATGCTCAAAGTGATCAGTATCATACCACTGTGGAGGTTCGTGATTCCAAATTCTTCATCCTCTGGCTGAACCTTAGTGTGACTTTTTGGCTGTTGGGTCATCAAGTTCTTTTATTTATTTTATACTCCGACTTCCCTTCGTGAAAAATATCCCCATATTACTTGTCTTTGTGGATATATATTTTTGATCTCCTGGTTAGAACATATATTTTTAATCAGTTGAGCTATGTTTATATTGGTGACCTGACCAGTTTAAATTTCTAGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCATCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACAATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG

mRNA sequence

ATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTTTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTACTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAATCCTTGTCGAAACAGATATCAACAAGTGAAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCATCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACAATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG

Coding sequence (CDS)

ATGGTTTCAGACGCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTTTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTACTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAATCCTTGTCGAAACAGATATCAACAAGTGAAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAGAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCATCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACAATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG

Protein sequence

MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITSSSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKITNNSDDDDNDFILSPKRRKM
Homology
[Close]
BLAST of Csor.00g138280 vs. NCBI nr
Match: KAG6585389.1 (hypothetical protein SDJN03_18122, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362 bits (928), Expect = 2.11e-125
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 199
           NNSDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

[Close]
BLAST of Csor.00g138280 vs. NCBI nr
Match: KAG7020306.1 (hypothetical protein SDJN02_16990, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362 bits (928), Expect = 1.07e-124
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS
Sbjct: 47  MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 106

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME
Sbjct: 107 SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 166

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT
Sbjct: 167 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 226

Query: 181 NNSDDDDNDFILSPKRRKM 199
           NNSDDDDNDFILSPKRRKM
Sbjct: 227 NNSDDDDNDFILSPKRRKM 245

[Close]
BLAST of Csor.00g138280 vs. NCBI nr
Match: XP_023536695.1 (uncharacterized protein LOC111797995 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359 bits (921), Expect = 2.47e-124
Identity = 197/199 (98.99%), Postives = 199/199 (100.00%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKATTSTAKVREKKVFNLAGQK+DPPEEREPLRIFYESLSKQISTSEMAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKHDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKK+RRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKMRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 199
           NNSDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

[Close]
BLAST of Csor.00g138280 vs. NCBI nr
Match: XP_022951620.1 (uncharacterized protein LOC111454380 isoform X1 [Cucurbita moschata])

HSP 1 Score: 357 bits (917), Expect = 1.00e-123
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60
           MVSD KPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSV PKSEVKSKTITS
Sbjct: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 199
           NNSDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

[Close]
BLAST of Csor.00g138280 vs. NCBI nr
Match: XP_023002565.1 (uncharacterized protein LOC111496374 [Cucurbita maxima])

HSP 1 Score: 351 bits (901), Expect = 2.76e-121
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSV PKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKAT+STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTS MAEFWMME
Sbjct: 61  SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 199
           N+SDDDDNDFILSPKRRKM
Sbjct: 181 NDSDDDDNDFILSPKRRKM 199

[Close]
BLAST of Csor.00g138280 vs. ExPASy TrEMBL
Match: A0A6J1GJC9 (uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454380 PE=4 SV=1)

HSP 1 Score: 357 bits (917), Expect = 4.86e-124
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60
           MVSD KPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSV PKSEVKSKTITS
Sbjct: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 199
           NNSDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

[Close]
BLAST of Csor.00g138280 vs. ExPASy TrEMBL
Match: A0A6J1KPA8 (uncharacterized protein LOC111496374 OS=Cucurbita maxima OX=3661 GN=LOC111496374 PE=4 SV=1)

HSP 1 Score: 351 bits (901), Expect = 1.34e-121
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVFPKSEVKSKTITS 60
           MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSV PKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKAT+STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTS MAEFWMME
Sbjct: 61  SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 199
           N+SDDDDNDFILSPKRRKM
Sbjct: 181 NDSDDDDNDFILSPKRRKM 199

[Close]
BLAST of Csor.00g138280 vs. ExPASy TrEMBL
Match: A0A1S3BCG5 (uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488185 PE=4 SV=1)

HSP 1 Score: 276 bits (705), Expect = 1.17e-91
Identity = 168/209 (80.38%), Postives = 179/209 (85.65%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKN-----NSSVSSSKHKSVSVFPKSEVKS 60
           MVSD K T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS+  KSEVKS
Sbjct: 1   MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKS 60

Query: 61  KTITSSSKTTTKATTST---AKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSE 120
           KTI+SSSKTTTK TT+T   AKVREKK+FNL GQKYDPPEEREPLRIFYESLSKQI  SE
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSL--KPPSRPESSQRPQQPSKN 180
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKS   KP SRPESSQRPQ PSKN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 181 GDLKAKKKITNNSDDDDNDFILSPKRRKM 199
           GD+KAKKKI N+SDDDD DFILSPKRRKM
Sbjct: 181 GDIKAKKKIMNDSDDDD-DFILSPKRRKM 205

[Close]
BLAST of Csor.00g138280 vs. ExPASy TrEMBL
Match: A0A0A0LLY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 1.67e-91
Identity = 168/209 (80.38%), Postives = 179/209 (85.65%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKN-----NSSVSSSKHKSVSVFPKSEVKS 60
           MVSD K T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS+  K+EVKS
Sbjct: 1   MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKS 60

Query: 61  KTITSSSKTTTKATTST---AKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSE 120
           KTI+SSSKTTTK TT+T   AKVREKKVFNL GQKYDPPEEREPLRIFYESLSKQI  SE
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSL--KPPSRPESSQRPQQPSKN 180
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKS   KP SRPESSQRPQ PSKN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 181 GDLKAKKKITNNSDDDDNDFILSPKRRKM 199
           GD+KAKKKI N+SDDDD DFILSPKRRKM
Sbjct: 181 GDIKAKKKIVNDSDDDD-DFILSPKRRKM 205

[Close]
BLAST of Csor.00g138280 vs. ExPASy TrEMBL
Match: A0A6J1BR23 (uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004987 PE=4 SV=1)

HSP 1 Score: 270 bits (689), Expect = 3.19e-89
Identity = 162/206 (78.64%), Postives = 177/206 (85.92%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKN-NSSVSSS---KHKSVSVFPKSEVKSK 60
           MV++ KPTVSK+K G+QDGGSRLKLESSDNK+   SS  SS   K KS SV  KSEVKSK
Sbjct: 1   MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSK 60

Query: 61  TITSSSKTTTKATTSTA---KVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEM 120
             +SSSKTT+K TT+T    KVREKKV+NLAGQKYDPPEEREPLRIFYESLSKQI TSEM
Sbjct: 61  ITSSSSKTTSKTTTTTTTTTKVREKKVYNLAGQKYDPPEEREPLRIFYESLSKQIPTSEM 120

Query: 121 AEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDL 180
           AEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+KS K PS+PESSQ+ Q  SKNGDL
Sbjct: 121 AEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDL 180

Query: 181 KAKKKITNNSDDDDNDFILSPKRRKM 199
           KAKKKITN+S +DD DFILSPKRRKM
Sbjct: 181 KAKKKITNDSSEDD-DFILSPKRRKM 205

[Close]
BLAST of Csor.00g138280 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 102/206 (49.51%), Postives = 133/206 (64.56%), Query Frame = 0 

Query: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNS--SVSSSKHKSVSVFPKSEVKSKTI 60
           + + ++P +S  K          K E+      NS  +++++   +  V  K++  S  +
Sbjct: 37  IATSSRPIMSDSKPRSSVSTVTAKSEAKPKVPINSVKTIATTSAAASLVKGKAQTTSTVV 96

Query: 61  TSSSKTTTKATTSTAK---VREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAE 120
           +     TT AT S  K    REKKV++LAGQK+DPPEEREPLRIFYESLSKQI  SEMAE
Sbjct: 97  SLVKAKTTSATVSLVKGKAKREKKVYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAE 156

Query: 121 FWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKP-PSRPESSQRPQQPSKNG-DL 180
           FW+MEHGMLSPEKAK+A+EKK R+ K+ R GTP KS     S+ ESSQR      NG D 
Sbjct: 157 FWLMEHGMLSPEKAKRAFEKKQRKMKQIRMGTPSKSAPTFSSKAESSQRTSASKNNGLDA 216

Query: 181 KAKKKITNNSDDDDNDFILSPKRRKM 200
           + KKK+ ++ DDDD+DFILS KRRK+
Sbjct: 217 RKKKKVVDDDDDDDDDFILSHKRRKV 242

[Close]
BLAST of Csor.00g138280 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 81/205 (39.51%), Postives = 102/205 (49.76%), Query Frame = 0 

Query: 15  GHQDGGSRLKLESS-----DNKKNNSSVSSSKHKSV----------SVFPKSEVKSKTIT 74
           G+  G  +LK E +     DNK   SSVS S+ K V             P S+  S    
Sbjct: 34  GNNAGSKKLKKEENDDDDDDNKPIKSSVSGSRAKPVKKKEEIDKDDEKKPVSKRNSSVGV 93

Query: 75  SSSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMM 134
           S      +      K RE+KV++L GQK + P+ER+PLRIFYESL KQI TS+MA+ W+M
Sbjct: 94  SKENKKPEKEEEVKKKRERKVYDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLM 153

Query: 135 EHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPES--------------SQRPQ 190
           E G+L  EKAKK  EKKL  QK  +  +P+KS     R  S              S+   
Sbjct: 154 ESGLLPAEKAKKVLEKKL--QKGGKLSSPVKSAASTPRSNSKSVTVKKKEVQKSPSEALS 213

The following BLAST results are available for this feature:
BLAST of Csor.00g138280 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g138280 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585389.12.11e-125100.00hypothetical protein SDJN03_18122, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7020306.11.07e-124100.00hypothetical protein SDJN02_16990, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023536695.12.47e-12498.99uncharacterized protein LOC111797995 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022951620.11.00e-12398.99uncharacterized protein LOC111454380 isoform X1 [Cucurbita moschata][more]
XP_023002565.12.76e-12197.49uncharacterized protein LOC111496374 [Cucurbita maxima][more]
BLAST of Csor.00g138280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GJC94.86e-12498.99uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KPA81.34e-12197.49uncharacterized protein LOC111496374 OS=Cucurbita maxima OX=3661 GN=LOC111496374... [more]
A0A1S3BCG51.17e-9180.38uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0LLY41.67e-9180.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1[more]
A0A6J1BR233.19e-8978.64uncharacterized protein LOC111004987 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of Csor.00g138280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11600.11.5e-3549.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G19990.11.4e-1739.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availablePANTHERPTHR33828:SF1OS05G0596200 PROTEINcoord: 5..198
NoneNo IPR availablePANTHERPTHR33828OS05G0596200 PROTEINcoord: 5..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g138280.m01Csor.00g138280.m01mRNA