Csor.00g136870 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g136870
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein SPIRAL1-like 1
Location	Csor_Chr12: 445752 .. 446974 (-)
RNA-Seq Expression	Csor.00g136870
Synteny	Csor.00g136870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCGTGGAGTTAGCAGTGGTGGTGGGCAGAGCTCATTGGGGTATCTGTTTGGAAGTGGAGAATCTCCCAATGCAGGTGCCCCCAAAGGTGGCCAAGCACCAGCTCCAGCGCCAGCGCCAGCGCCAGCACCAGCACCACGTTCTAATGAAGGAAAACCTGTATCCAAACCAGCAGCTTCCAAACCTGCTGCTACTGCTTCACCACCTACAGATTCTGGCAAGCAGATTCCAGCTGGTATTCATAGTAGCTCCTCGAACAACTATTTGAGGGCTGATGGTCAGAACACTGGCAATTTCATAACGGTATGGCTACATTTAGGATTATTCTGCAATTGATCTTGTCTTACCTAACTACTAGCATGTTGTTGATAACTGCAAGAGAAGTAATTTTGTTTCAGTTTAACACGTTTCAAATACAGTTTGTTTGGTCTATCAACGAATCTTTCTATCCAATCTAGACGATACGATGGTCAACTAACCTTACCACTCACTTTCCTGTGTGCCCTAATGAGTGTGACATTTGACATGATGTGTCATTCTGTCCTTAAACATTGCAAATACATACTGAATATTTTGAGGAGTATGACATAGTGCTTATCCTGAGAAAAAGAATGTGTGACCATTCAGTTAGGTGCGATGTTAAAATGTCAATATATGGGAGCAAACAAGGAAAATGTATTACTTGGATTTGGATGTAAGTAATTACTTTTGGACCACAGAATTATGTCACAGTCATGTCTAGATAATAAGAGTATTGTGCAGCCGCTACGATAACCCACTTGCTCATCTTTCTGTTAATCACATTTTAGGCTGTTGTTTCAAATTCTTCCATTTTCCTGTCCCATCTTTGAATTGTTGAAGACATCATCATATCCATGACTTATCTTCATGATTATTTTCTCAAATTGCACTCAAGGACGTCCACATCTCTTCAGCTTGTTTTACGCATATGTGGTCTTATAACCCCACACAGAGGAATAATTGTCCAAAATCACCCAATCTAGGCCAGACACAAAAGAGGAAGAAAGCTTTGTTACCCTGATATGATAACTACTGCAAAAAGAGCATCCTGGCGAATTTGTTTGAAACCAACCCCCCCTATAGAGTGATTGATCGGCTTTCTTTTGTGGGTGCAGGATCGGCCTTCAACCAAGGTCCACGCAGCTCCTGGCGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA

mRNA sequence

ATGGGCCGTGGAGTTAGCAGTGGTGGTGGGCAGAGCTCATTGGGGTATCTGTTTGGAAGTGGAGAATCTCCCAATGCAGGTGCCCCCAAAGGTGGCCAAGCACCAGCTCCAGCGCCAGCGCCAGCGCCAGCACCAGCACCACGTTCTAATGAAGGAAAACCTGTATCCAAACCAGCAGCTTCCAAACCTGCTGCTACTGCTTCACCACCTACAGATTCTGGCAAGCAGATTCCAGCTGGTATTCATAGTAGCTCCTCGAACAACTATTTGAGGGCTGATGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTCCACGCAGCTCCTGGCGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA

Coding sequence (CDS)

ATGGGCCGTGGAGTTAGCAGTGGTGGTGGGCAGAGCTCATTGGGGTATCTGTTTGGAAGTGGAGAATCTCCCAATGCAGGTGCCCCCAAAGGTGGCCAAGCACCAGCTCCAGCGCCAGCGCCAGCGCCAGCACCAGCACCACGTTCTAATGAAGGAAAACCTGTATCCAAACCAGCAGCTTCCAAACCTGCTGCTACTGCTTCACCACCTACAGATTCTGGCAAGCAGATTCCAGCTGGTATTCATAGTAGCTCCTCGAACAACTATTTGAGGGCTGATGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTCCACGCAGCTCCTGGCGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA

Protein sequence

MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK

Homology

[Close]

BLAST of Csor.00g136870 vs. ExPASy Swiss-Prot
Match: Q7Y1L9 (Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-29
Identity = 83/126 (65.87%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           M RG S+GGGQSSLGYLFG  E+P    P    APA APAPAPAPAP +    P  KP+ 
Sbjct: 1   MSRGGSAGGGQSSLGYLFGGNEAPK---PAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSP 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSS-SSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSL 120
           +K  AT        KQIPAGI  S S+NNY RADGQNTGNF+TDRPSTKVHAAPGGGSSL
Sbjct: 61  AKADAT--------KQIPAGIQGSRSNNNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSL 115

Query: 121 DYLFGG 126
            YLFGG
Sbjct: 121 GYLFGG 115

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BLAST of Csor.00g136870 vs. ExPASy Swiss-Prot
Match: B3H4F1 (Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.5e-29
Identity = 83/127 (65.35%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVS GGGQSSLGYLFGSGE             AP PA   APAP S+E  P+S  A 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGE-------------APKPAINNAPAP-SSETLPIS--AD 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
             P   A+   +  KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLD
Sbjct: 61  PSPKHVAAQTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLD 111

Query: 121 YLFGGAG 128
           YLFGG G
Sbjct: 121 YLFGGGG 111

[Close]

BLAST of Csor.00g136870 vs. ExPASy Swiss-Prot
Match: Q9LE54 (Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.9e-27
Identity = 75/125 (60.00%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVS+GGGQSSLGYLFGSGE+P   A    + PA   + A AP  +            
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAV--NKTPAETESSAHAPPTQ------------ 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
               A A+   DS KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLD
Sbjct: 61  ----AAAANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLD 107

Query: 121 YLFGG 126
           YLFGG
Sbjct: 121 YLFGG 107

[Close]

BLAST of Csor.00g136870 vs. ExPASy Swiss-Prot
Match: Q2QQ99 (Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-25
Identity = 72/125 (57.60%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFG GE     APK  + PAP   PAP                 
Sbjct: 1   MGRGVSSGGGQSSLGYLFGGGE-----APKSAEKPAPVQKPAP----------------- 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
                  S   +  K+IPAGI SS +NNY+RA+GQN GNF+TDRPSTKV AAPGGGSSLD
Sbjct: 61  -------SSSAEKLKEIPAGIQSSKANNYMRAEGQNCGNFLTDRPSTKVQAAPGGGSSLD 96

Query: 121 YLFGG 126
           YLF G
Sbjct: 121 YLFSG 96

[Close]

BLAST of Csor.00g136870 vs. ExPASy Swiss-Prot
Match: Q9SJW3 (Protein SPIRAL1 OS=Arabidopsis thaliana OX=3702 GN=SPR1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-24
Identity = 79/130 (60.77%), Postives = 86/130 (66.15%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSK 60
           MGRG S GGGQSSL YLF            GG APAP P PAP PAP  SN G   PV+ 
Sbjct: 1   MGRGNSCGGGQSSLDYLF------------GGDAPAPKPVPAPRPAPTESNNGPAPPVTA 60

Query: 61  PAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGG 120
             A+    A T+  P +  KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGG
Sbjct: 61  VTATALTTATTSVEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGG 117

Query: 121 GSSLDYLFGG 126
           GSSLDYLF G
Sbjct: 121 GSSLDYLFTG 117

[Close]

BLAST of Csor.00g136870 vs. NCBI nr
Match: KAG6585249.1 (Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020170.1 Protein SPIRAL1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236 bits (602), Expect = 5.58e-78
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
           SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120

Query: 121 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 121 YLFGGAGGK 129

[Close]

BLAST of Csor.00g136870 vs. NCBI nr
Match: XP_023537697.1 (protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234 bits (596), Expect = 4.58e-77
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNE KPVSKPAA
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEAKPVSKPAA 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
           SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120

Query: 121 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 121 YLFGGAGGK 129

[Close]

BLAST of Csor.00g136870 vs. NCBI nr
Match: XP_023002715.1 (protein SPIRAL1-like 1 [Cucurbita maxima])

HSP 1 Score: 229 bits (583), Expect = 4.40e-75
Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAP PAPRSNEGK VSKPAA
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPVPAPRSNEGKHVSKPAA 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
            KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 61  FKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120

Query: 121 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 121 YLFGGAGGK 129

[Close]

BLAST of Csor.00g136870 vs. NCBI nr
Match: XP_022951957.1 (protein SPIRAL1-like 1 [Cucurbita moschata])

HSP 1 Score: 229 bits (583), Expect = 4.70e-75
Identity = 128/131 (97.71%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP--RSNEGKPVSKP 60
           MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP  RSNE KPVSKP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPAPRSNEAKPVSKP 60

Query: 61  AASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSS 120
           AASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSS
Sbjct: 61  AASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSS 120

Query: 121 LDYLFGGAGGK 129
           LDYLFGGAGGK
Sbjct: 121 LDYLFGGAGGK 131

[Close]

BLAST of Csor.00g136870 vs. NCBI nr
Match: XP_022961880.1 (protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like 2 [Cucurbita maxima] >XP_023546068.1 protein SPIRAL1-like 2 [Cucurbita pepo subsp. pepo] >KAG6598640.1 Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029577.1 Protein SPIRAL1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196 bits (497), Expect = 3.85e-62
Identity = 111/129 (86.05%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFGSGE+PNAGAPKGGQAP             SNEGK VSKPAA
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPP------------SNEGKAVSKPAA 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
           SKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 61  SKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 117

Query: 121 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 121 YLFGGAGGK 117

[Close]

BLAST of Csor.00g136870 vs. ExPASy TrEMBL
Match: A0A6J1KPR8 (protein SPIRAL1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111496491 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 2.13e-75
Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAP PAPRSNEGK VSKPAA
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPVPAPRSNEGKHVSKPAA 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
            KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 61  FKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120

Query: 121 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 121 YLFGGAGGK 129

[Close]

BLAST of Csor.00g136870 vs. ExPASy TrEMBL
Match: A0A6J1GJ28 (protein SPIRAL1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454688 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 2.28e-75
Identity = 128/131 (97.71%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP--RSNEGKPVSKP 60
           MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP  RSNE KPVSKP
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPAPRSNEAKPVSKP 60

Query: 61  AASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSS 120
           AASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSS
Sbjct: 61  AASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSS 120

Query: 121 LDYLFGGAGGK 129
           LDYLFGGAGGK
Sbjct: 121 LDYLFGGAGGK 131

[Close]

BLAST of Csor.00g136870 vs. ExPASy TrEMBL
Match: A0A6J1K972 (protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1)

HSP 1 Score: 196 bits (497), Expect = 1.86e-62
Identity = 111/129 (86.05%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFGSGE+PNAGAPKGGQAP             SNEGK VSKPAA
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPP------------SNEGKAVSKPAA 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
           SKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 61  SKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 117

Query: 121 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 121 YLFGGAGGK 117

[Close]

BLAST of Csor.00g136870 vs. ExPASy TrEMBL
Match: A0A6J1HDG7 (protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1)

HSP 1 Score: 196 bits (497), Expect = 1.86e-62
Identity = 111/129 (86.05%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVSSGGGQSSLGYLFGSGE+PNAGAPKGGQAP             SNEGK VSKPAA
Sbjct: 1   MGRGVSSGGGQSSLGYLFGSGEAPNAGAPKGGQAPP------------SNEGKAVSKPAA 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
           SKPAATASPP D+ KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 61  SKPAATASPPADATKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 117

Query: 121 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 121 YLFGGAGGK 117

[Close]

BLAST of Csor.00g136870 vs. ExPASy TrEMBL
Match: A0A1S3BCR3 (protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1)

HSP 1 Score: 186 bits (471), Expect = 1.88e-58
Identity = 108/129 (83.72%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 2   GRGVSSGGGQSSLGYLFGSGESPNAGAPKGG-QAPAPAPAPAPAPAPRSNEGKPVSKPAA 61
           GRGVSSGGGQSSLGYLFG G++PNAGAPKGG QAP P           SNEGK VSKPA 
Sbjct: 3   GRGVSSGGGQSSLGYLFGDGDAPNAGAPKGGRQAPPP-----------SNEGKTVSKPAV 62

Query: 62  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 121
           SKPAATASPP D  KQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD
Sbjct: 63  SKPAATASPPADITKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120

Query: 122 YLFGGAGGK 129
           YLFGGAGGK
Sbjct: 123 YLFGGAGGK 120

[Close]

BLAST of Csor.00g136870 vs. TAIR 10
Match: AT1G26355.1 (SPIRAL1-like1 )

HSP 1 Score: 128.3 bits (321), Expect = 4.6e-30
Identity = 83/127 (65.35%), Postives = 91/127 (71.65%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVS GGGQSSLGYLFGSGE             AP PA   APAP S+E  P+S  A 
Sbjct: 1   MGRGVSVGGGQSSLGYLFGSGE-------------APKPAINNAPAP-SSETLPIS--AD 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
             P   A+   +  KQIPAGI+ SS+NNY+RADGQNTGNF+TDRPSTKVHAAPGGGSSLD
Sbjct: 61  PSPKHVAAQTVNVTKQIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLD 111

Query: 121 YLFGGAG 128
           YLFGG G
Sbjct: 121 YLFGGGG 111

[Close]

BLAST of Csor.00g136870 vs. TAIR 10
Match: AT1G69230.1 (SPIRAL1-like2 )

HSP 1 Score: 121.3 bits (303), Expect = 5.6e-28
Identity = 75/125 (60.00%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVS+GGGQSSLGYLFGSGE+P   A    + PA   + A AP  +            
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAV--NKTPAETESSAHAPPTQ------------ 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
               A A+   DS KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLD
Sbjct: 61  ----AAAANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLD 107

Query: 121 YLFGG 126
           YLFGG
Sbjct: 121 YLFGG 107

[Close]

BLAST of Csor.00g136870 vs. TAIR 10
Match: AT1G69230.2 (SPIRAL1-like2 )

HSP 1 Score: 121.3 bits (303), Expect = 5.6e-28
Identity = 75/125 (60.00%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEGKPVSKPAA 60
           MGRGVS+GGGQSSLGYLFGSGE+P   A    + PA   + A AP  +            
Sbjct: 1   MGRGVSAGGGQSSLGYLFGSGEAPKLAAV--NKTPAETESSAHAPPTQ------------ 60

Query: 61  SKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLD 120
               A A+   DS KQ+PAG++S+S+NNY+RA+GQNTGNFITDRPSTKVH+APGGGSSLD
Sbjct: 61  ----AAAANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLD 107

Query: 121 YLFGG 126
           YLFGG
Sbjct: 121 YLFGG 107

[Close]

BLAST of Csor.00g136870 vs. TAIR 10
Match: AT2G03680.1 (spiral1 )

HSP 1 Score: 114.0 bits (284), Expect = 9.0e-26
Identity = 79/130 (60.77%), Postives = 86/130 (66.15%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSK 60
           MGRG S GGGQSSL YLF            GG APAP P PAP PAP  SN G   PV+ 
Sbjct: 1   MGRGNSCGGGQSSLDYLF------------GGDAPAPKPVPAPRPAPTESNNGPAPPVTA 60

Query: 61  PAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGG 120
             A+    A T+  P +  KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGG
Sbjct: 61  VTATALTTATTSVEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGG 117

Query: 121 GSSLDYLFGG 126
           GSSLDYLF G
Sbjct: 121 GSSLDYLFTG 117

[Close]

BLAST of Csor.00g136870 vs. TAIR 10
Match: AT2G03680.2 (spiral1 )

HSP 1 Score: 114.0 bits (284), Expect = 9.0e-26
Identity = 79/130 (60.77%), Postives = 86/130 (66.15%), Query Frame = 0


Query: 1   MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAP-RSNEG--KPVSK 60
           MGRG S GGGQSSL YLF            GG APAP P PAP PAP  SN G   PV+ 
Sbjct: 1   MGRGNSCGGGQSSLDYLF------------GGDAPAPKPVPAPRPAPTESNNGPAPPVTA 60

Query: 61  PAAS--KPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGG 120
             A+    A T+  P +  KQIPAGI  +  NNY RA+GQNTGNF+TDRPSTKVHAAPGG
Sbjct: 61  VTATALTTATTSVEPAELNKQIPAGI-KTPVNNYARAEGQNTGNFLTDRPSTKVHAAPGG 117

Query: 121 GSSLDYLFGG 126
           GSSLDYLF G
Sbjct: 121 GSSLDYLFTG 117

The following BLAST results are available for this feature:

BLAST of Csor.00g136870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Y1L9	1.0e-29	65.87	Protein SPIRAL1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0417800 ...	[more]
B3H4F1	6.5e-29	65.35	Protein SPIRAL1-like 1 OS=Arabidopsis thaliana OX=3702 GN=SP1L1 PE=2 SV=1	[more]
Q9LE54	7.9e-27	60.00	Protein SPIRAL1-like 2 OS=Arabidopsis thaliana OX=3702 GN=SP1L2 PE=2 SV=1	[more]
Q2QQ99	3.3e-25	57.60	Protein SPIRAL1-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0502000 ...	[more]
Q9SJW3	1.3e-24	60.77	Protein SPIRAL1 OS=Arabidopsis thaliana OX=3702 GN=SPR1 PE=2 SV=1	[more]

BLAST of Csor.00g136870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585249.1	5.58e-78	100.00	Protein SPIRAL1-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020...	[more]
XP_023537697.1	4.58e-77	99.22	protein SPIRAL1-like 1 [Cucurbita pepo subsp. pepo]	[more]
XP_023002715.1	4.40e-75	97.67	protein SPIRAL1-like 1 [Cucurbita maxima]	[more]
XP_022951957.1	4.70e-75	97.71	protein SPIRAL1-like 1 [Cucurbita moschata]	[more]
XP_022961880.1	3.85e-62	86.05	protein SPIRAL1-like 2 [Cucurbita moschata] >XP_022997295.1 protein SPIRAL1-like...	[more]

BLAST of Csor.00g136870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPR8	2.13e-75	97.67	protein SPIRAL1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111496491 PE=3 SV=1	[more]
A0A6J1GJ28	2.28e-75	97.71	protein SPIRAL1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454688 PE=3 SV=1	[more]
A0A6J1K972	1.86e-62	86.05	protein SPIRAL1-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111492241 PE=3 SV=1	[more]
A0A6J1HDG7	1.86e-62	86.05	protein SPIRAL1-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111462521 PE=3 SV=1	[more]
A0A1S3BCR3	1.88e-58	83.72	protein SPIRAL1-like 1 OS=Cucumis melo OX=3656 GN=LOC103488465 PE=3 SV=1	[more]

BLAST of Csor.00g136870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26355.1	4.6e-30	65.35	SPIRAL1-like1	[more]
AT1G69230.1	5.6e-28	60.00	SPIRAL1-like2	[more]
AT1G69230.2	5.6e-28	60.00	SPIRAL1-like2	[more]
AT2G03680.1	9.0e-26	60.77	spiral1	[more]
AT2G03680.2	9.0e-26	60.77	spiral1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR33403:SF28	PROTEIN SPIRAL1-LIKE 2	coord: 1..127
IPR039613	Protein SPIRAL1-like	PANTHER	PTHR33403	SPR1	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g136870.m01	Csor.00g136870.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043622	cortical microtubule organization
cellular_component	GO:0010005	cortical microtubule, transverse to long axis