Csor.00g136650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g136650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Csor_Chr12: 345779 .. 346072 (-)
RNA-Seq Expression	Csor.00g136650
Synteny	Csor.00g136650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGATTGCGCTGAGTCAGATTGCCACCGGTCTGAGCGTGTTGGCCGGCGCGGTGGTGGTGAAGTCCGTCATTGAGCAGAAGCCGATGGCCAGGCCTATGCCGAGGTGCGCCACATGTAATGGGTCGGGTCGGGTTACATGCCTATGTGTCCGGTGGTCCGATGGAGATGTTGGGTGCCGGTCGTGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGCTGCGGTGGCGGCGGAAGAGGGCGGCCGATCACGGTGCAGTTATCGGCTAGCCAACCCAACAGCCGATTTTGA

mRNA sequence

ATGGATCCGATTGCGCTGAGTCAGATTGCCACCGGTCTGAGCGTGTTGGCCGGCGCGGTGGTGGTGAAGTCCGTCATTGAGCAGAAGCCGATGGCCAGGCCTATGCCGAGGTGCGCCACATGTAATGGGTCGGGTCGGGTTACATGCCTATGTGTCCGGTGGTCCGATGGAGATGTTGGGTGCCGGTCGTGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGCTGCGGTGGCGGCGGAAGAGGGCGGCCGATCACGGTGCAGTTATCGGCTAGCCAACCCAACAGCCGATTTTGA

Coding sequence (CDS)

ATGGATCCGATTGCGCTGAGTCAGATTGCCACCGGTCTGAGCGTGTTGGCCGGCGCGGTGGTGGTGAAGTCCGTCATTGAGCAGAAGCCGATGGCCAGGCCTATGCCGAGGTGCGCCACATGTAATGGGTCGGGTCGGGTTACATGCCTATGTGTCCGGTGGTCCGATGGAGATGTTGGGTGCCGGTCGTGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGCTGCGGTGGCGGCGGAAGAGGGCGGCCGATCACGGTGCAGTTATCGGCTAGCCAACCCAACAGCCGATTTTGA

Protein sequence

MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVGCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF

Homology

[Close]

BLAST of Csor.00g136650 vs. NCBI nr
Match: KAG6585227.1 (hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020147.1 hypothetical protein SDJN02_16829, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197 bits (502), Expect = 9.50e-64
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60
          MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG
Sbjct: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60

Query: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF 97
          CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF
Sbjct: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF 97

[Close]

BLAST of Csor.00g136650 vs. NCBI nr
Match: XP_022132135.1 (uncharacterized protein LOC111005075 [Momordica charantia])

HSP 1 Score: 174 bits (441), Expect = 1.93e-54
Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60
          MDP+ L+Q+ATGLSV+AGAVVVKSV++QKPMA P+P C TCNGSGRVTC+CVRWSDGD G
Sbjct: 1  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPTCPTCNGSGRVTCICVRWSDGDFG 60

Query: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF 97
          CRSC+GSGRMSCRSCGGGGRGRPITVQLSA QPN RF
Sbjct: 61 CRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNRRF 97

[Close]

BLAST of Csor.00g136650 vs. NCBI nr
Match: XP_004142934.1 (uncharacterized protein LOC101220122 [Cucumis sativus])

HSP 1 Score: 167 bits (423), Expect = 1.04e-51
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDV 60
          MD IALSQ+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTC+CVRWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN 94
          GCRSCSGSGRMSCRSCGGGGRGRPITVQLS SQ N
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSN 95

[Close]

BLAST of Csor.00g136650 vs. NCBI nr
Match: KAA0061011.1 (uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (414), Expect = 2.46e-50
Identity = 83/93 (89.25%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDV 60
          MD IAL+Q+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTCLCVRWSDGDV
Sbjct: 1  MDQIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQ 92
          GCRSCSGSGRMSCRSCGGGGRGRPI+VQLS SQ
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPISVQLSTSQ 93

[Close]

BLAST of Csor.00g136650 vs. NCBI nr
Match: XP_010100228.1 (uncharacterized protein LOC21384964 [Morus notabilis] >EXB81983.1 hypothetical protein L484_001360 [Morus notabilis])

HSP 1 Score: 152 bits (383), Expect = 1.35e-45
Identity = 68/94 (72.34%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60
          M+PI L+Q+ATGLSVL GAV+VKSV++QKPMA P PRC +CNG+GRVTCLC RWSDGD+G
Sbjct: 1  MEPIVLTQVATGLSVLVGAVLVKSVMDQKPMAGPFPRCPSCNGTGRVTCLCSRWSDGDIG 60

Query: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN 94
          CR+C+GSGRM C SCGG G GRPIT Q+S  +PN
Sbjct: 61 CRTCAGSGRMGCSSCGGSGTGRPITAQISVRRPN 94

[Close]

BLAST of Csor.00g136650 vs. ExPASy TrEMBL
Match: A0A6J1BRL0 (uncharacterized protein LOC111005075 OS=Momordica charantia OX=3673 GN=LOC111005075 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 9.33e-55
Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60
          MDP+ L+Q+ATGLSV+AGAVVVKSV++QKPMA P+P C TCNGSGRVTC+CVRWSDGD G
Sbjct: 1  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPTCPTCNGSGRVTCICVRWSDGDFG 60

Query: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSRF 97
          CRSC+GSGRMSCRSCGGGGRGRPITVQLSA QPN RF
Sbjct: 61 CRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNRRF 97

[Close]

BLAST of Csor.00g136650 vs. ExPASy TrEMBL
Match: A0A0A0LKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1)

HSP 1 Score: 167 bits (423), Expect = 5.04e-52
Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDV 60
          MD IALSQ+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTC+CVRWSDGDV
Sbjct: 1  MDQIALSQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCICVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN 94
          GCRSCSGSGRMSCRSCGGGGRGRPITVQLS SQ N
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSMSQSN 95

[Close]

BLAST of Csor.00g136650 vs. ExPASy TrEMBL
Match: A0A5A7V5E2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001460 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 1.19e-50
Identity = 83/93 (89.25%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQK-PMARPMPRCATCNGSGRVTCLCVRWSDGDV 60
          MD IAL+Q+ATGLSVLAGAVVVKSVIEQK PMA  MPRC TC GSGRVTCLCVRWSDGDV
Sbjct: 1  MDQIALTQLATGLSVLAGAVVVKSVIEQKLPMAGSMPRCPTCKGSGRVTCLCVRWSDGDV 60

Query: 61 GCRSCSGSGRMSCRSCGGGGRGRPITVQLSASQ 92
          GCRSCSGSGRMSCRSCGGGGRGRPI+VQLS SQ
Sbjct: 61 GCRSCSGSGRMSCRSCGGGGRGRPISVQLSTSQ 93

[Close]

BLAST of Csor.00g136650 vs. ExPASy TrEMBL
Match: W9RCB8 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001360 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 6.55e-46
Identity = 68/94 (72.34%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60
          M+PI L+Q+ATGLSVL GAV+VKSV++QKPMA P PRC +CNG+GRVTCLC RWSDGD+G
Sbjct: 1  MEPIVLTQVATGLSVLVGAVLVKSVMDQKPMAGPFPRCPSCNGTGRVTCLCSRWSDGDIG 60

Query: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN 94
          CR+C+GSGRM C SCGG G GRPIT Q+S  +PN
Sbjct: 61 CRTCAGSGRMGCSSCGGSGTGRPITAQISVRRPN 94

[Close]

BLAST of Csor.00g136650 vs. ExPASy TrEMBL
Match: A0A061E5D7 (Chaperone protein dnaJ-related OS=Theobroma cacao OX=3641 GN=TCM_008820 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 2.75e-45
Identity = 69/96 (71.88%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60
          M PI L+Q+ATGLSVLAGAV+VKSV++QKPMA P  RCATCNG+GRVTC+C RWSDGDVG
Sbjct: 1  MGPIVLTQVATGLSVLAGAVLVKSVMDQKPMAGPFQRCATCNGTGRVTCICSRWSDGDVG 60

Query: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPNSR 96
          CR+C+GSGRM+C SCGG G GRP+ VQ+S   P +R
Sbjct: 61 CRTCAGSGRMACSSCGGSGTGRPLPVQISVRPPTNR 96

[Close]

BLAST of Csor.00g136650 vs. TAIR 10
Match: AT5G43260.1 (chaperone protein dnaJ-related )

HSP 1 Score: 139.0 bits (349), Expect = 2.0e-33
Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 1  MDPIALSQIATGLSVLAGAVVVKSVIEQKPMARPMPRCATCNGSGRVTCLCVRWSDGDVG 60
          M PI ++Q+ATG+SVLAGAV +KSV++QKPMA   PRC TCNG+GRVTC C RWSDGDVG
Sbjct: 1  MSPIVITQLATGISVLAGAVFIKSVMDQKPMAGQFPRCPTCNGTGRVTCFCSRWSDGDVG 60

Query: 61 CRSCSGSGRMSCRSCGGGGRGRPITVQLSASQPN 95
          CR CSGSGR +C +CGG G GRP+  Q++   PN
Sbjct: 61 CRRCSGSGRAACSNCGGSGTGRPLPAQITVQPPN 94

The following BLAST results are available for this feature:

BLAST of Csor.00g136650 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g136650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585227.1	9.50e-64	100.00	hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022132135.1	1.93e-54	83.51	uncharacterized protein LOC111005075 [Momordica charantia]	[more]
XP_004142934.1	1.04e-51	89.47	uncharacterized protein LOC101220122 [Cucumis sativus]	[more]
KAA0061011.1	2.46e-50	89.25	uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa]	[more]
XP_010100228.1	1.35e-45	72.34	uncharacterized protein LOC21384964 [Morus notabilis] >EXB81983.1 hypothetical p...	[more]

BLAST of Csor.00g136650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRL0	9.33e-55	83.51	uncharacterized protein LOC111005075 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A0A0LKQ8	5.04e-52	89.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351540 PE=4 SV=1	[more]
A0A5A7V5E2	1.19e-50	89.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
W9RCB8	6.55e-46	72.34	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001360 PE=4 SV=1	[more]
A0A061E5D7	2.75e-45	71.88	Chaperone protein dnaJ-related OS=Theobroma cacao OX=3641 GN=TCM_008820 PE=4 SV=...	[more]

BLAST of Csor.00g136650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43260.1	2.0e-33	65.96	chaperone protein dnaJ-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34687	CHAPERONE PROTEIN DNAJ-LIKE PROTEIN	coord: 1..94
None	No IPR available	PANTHER	PTHR34687:SF4	BNAC09G17400D PROTEIN	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g136650.m01	Csor.00g136650.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane