Csor.00g135000 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g135000
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 2206200 .. 2208728 (+)
RNA-Seq ExpressionCsor.00g135000
SyntenyCsor.00g135000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTACATACTGGAGAGGCATTCAGATTGGCGCCGGATACGGGATTCTCGTTTCAAACACAGGCCCCAGATTACCTTAGCAGGTTAGCATGTAGAATGAAAATAATGCATCACAGTGATTCTGAAAACAATTTTAGCCTTCAAGTGATTTGAGTCTGAAACTGATCTTTAATGTTTGATGTTTTGCTCGATGATTACTGTATTGGAAGTGATTGTAATGATGTGATGATTATGATGAGTGTAGATTGTAAGAGTGAAATACTGAATGTTGGTTAGGTTGACCTTTGTGATTCACTGCCAACGAAGGTGGCTTCACTGTATTTTCTTTGATTAAAGAAGCCAGTTGAGGTGAGTTTATGCCTGGTAAGCATCAAATTCTGAGTTTATGAGTTTAAATACATTGGGCCGGGTATACAAAACAACTTAAACCATCGTATACAATGATCTGATGGTTATGATGAGCGTAGATTGTAAGAGTTAAATTCAACTATTTGGATATTGTTCTCTTTGAGTTTTCTCTCTCGGGCTTCCCCTCAAGGCTTTAAAACATGTCTGCTAGGGGAAGGTTTTCACACCCTTATAAAGGGTCTTTTGTTCTCCTTCCCAACCAATGGAGGACATCACAATTTCTCTCTTCTATTTACACATTTGGGTAAGTTTTTTTTTTTTTTTTTTTTTTCTCTTCGGTCGATCCTGTCAATGTTTTTTTTTTTTTTTTTTTTTGTTATTTACATATGTTTTTTCATAGATAATTTTCTTTAATAAGACCAATATAAAAATAATTATACACGAGTATGAAATCGTGTTTAAACAGAACATAGTTACACATGATTTTCTAGTCATTTTCGTCCATGGCATATTTGATTTTGCCCTAAAATTGTTTTTCTTAAAAGGTTGTACCATTCTTCTACGTCTTTTGCATTTATGATTTTCAATTTAGCCTTCTATTGTCTTGTTTATACTTTTGATCTAACACTCGAGTTTAGGCGAGAAGTTTTATATCTGATTTTTCCCTTTAAAGTCAAACTTACATAATTTTGTTATAAGCCTTAGTCTGACTTGTTTTGCCCAACCCAGCCTTAGTCTGACTTGTTTTGCCCAACCCTTCGACCCGCATGGGACGTAGTGTAGAGCCTACAACCCGATCCATCCTCTTGACACGTCTTACCTGGGAGTGCCAAGTGTCAATACGAGATAATTTTGTAGAATTTCACGCCTGGAAAGGGTCGAATGTTGTACTTGGGAGTCGAATGCGTGAATCAATAGTTGCCACGTGTCTCTCTAAGGGTGTGCATATCCTTCACCCAGGCGCGTTTGTATTCGCTTGTGGGGAGCTCTTTTGGCTCATGAAAGCGTGTATGTTGCGTATGAGTCGTGTTTTGTCTCGACTTTGGTACTAACACTAATTTTACTTGAATTAGGGCCTCCTAGAGAATTTTTAGAAATTTTGGAGCCTTTTAACATGCATAAAACTAGCTCAAGAAGGCACGTGTCATTCAAGTAAGCAACCACACGGACTCTAGGCAAGTAATACATGTAGGGATCGCTAGGACGTCCTAGCATGCCAGTATTTTTTTCCTTAAATGGATCGAAATTGCGTATTAAAAACTTTAGAAGCACGTTTTTGGATGAGTATGTACCCTATGTATTTTATGAAAATAAAATTACTACTATGCCCTAGATTGAGATTTTCGAGAAACATGTTTTATATTTTATGTAATGCTAGAGAGAGAAGATGCATAACAAGAATACGAGTTAGGAAACATGGACGAGTAAGTTATGTAACAGGTAAGAAATTACCAAAATGCTGTTATGATAAAATTTGTGATGAATATTGTTTTATATGCTTTCCACTGTATTAGAAAGGTGGATGAGCTATTGTCCTTTGTGCTTCGGGCGAGGTGGATGTTATATCCTCATTGAGCTTGCTTGTTTGTTTGCATGAATATTTTAATTAATGTTTTTCAGAGTTTTAGGTGATTGATAGGATATCTCCCTAATCATCTTCTACGAATATCGAGACTATATAAACAATGCTCTGGGTGATTGATAAGGTAATTTCTCTAGCAAAGCATGCACAAGAGGGTCGAGCTAAGATTAGGGCGTGATAGGTAGAGTAGATTCAATATTAATTTGCGTCAGTATGTTTTCAGTAGACCTTGAATCTCCAGGATTGAGAGCGATAAAAGGTTTAGACCTGTGTGCACCCCGAGATTTGATTAGTCTCGAGAAGCTAACCTCGAACATCCTAAAAGTGAGAGATTAGATTTAAACTACCTAGACGCCTAAATAACCTAGTAAACCTCCATGGCATTCAAAACTGACAAAGGTAGCTCTTCAAGCCACTAGTAGCATATGCAATATCATCAGTTTAACATTTGATAACCGTATCATGGATGAGACTACTTATGTTTGTGTGACCTAATAGTTCAGTTGGATAACCGTGAAAATTCATCCAATGATGGGACATGGATCACTCTTCTAATGCAAATCCATCCAATGGTGGGACGTGGGTCACACGAATAA

mRNA sequence

ATGATTGTACATACTGGAGAGGCATTCAGATTGGCGCCGGATACGGGATTCTCGTTTCAAACACAGGCCCCAGATTACCTTAGCAGTGATTGTAATGATGTGATGATTATGATGAGTGTAGATTTTGAGTTGGATAACCGTGAAAATTCATCCAATGATGGGACATGGATCACTCTTCTAATGCAAATCCATCCAATGGTGGGACGTGGGTCACACGAATAA

Coding sequence (CDS)

ATGATTGTACATACTGGAGAGGCATTCAGATTGGCGCCGGATACGGGATTCTCGTTTCAAACACAGGCCCCAGATTACCTTAGCAGTGATTGTAATGATGTGATGATTATGATGAGTGTAGATTTTGAGTTGGATAACCGTGAAAATTCATCCAATGATGGGACATGGATCACTCTTCTAATGCAAATCCATCCAATGGTGGGACGTGGGTCACACGAATAA

Protein sequence

MIVHTGEAFRLAPDTGFSFQTQAPDYLSSDCNDVMIMMSVDFELDNRENSSNDGTWITLLMQIHPMVGRGSHE
Homology
[Close]
BLAST of Csor.00g135000 vs. NCBI nr
Match: KAG6603323.1 (hypothetical protein SDJN03_03932, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155 bits (391), Expect = 1.47e-47
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MIVHTGEAFRLAPDTGFSFQTQAPDYLSSDCNDVMIMMSVDFELDNRENSSNDGTWITLL 60
          MIVHTGEAFRLAPDTGFSFQTQAPDYLSSDCNDVMIMMSVDFELDNRENSSNDGTWITLL
Sbjct: 1  MIVHTGEAFRLAPDTGFSFQTQAPDYLSSDCNDVMIMMSVDFELDNRENSSNDGTWITLL 60

Query: 61 MQIHPMVGRGSHE 73
          MQIHPMVGRGSHE
Sbjct: 61 MQIHPMVGRGSHE 73

The following BLAST results are available for this feature:
BLAST of Csor.00g135000 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g135000 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603323.11.47e-47100.00hypothetical protein SDJN03_03932, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g135000 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g135000 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g135000.m01Csor.00g135000.m01mRNA