Csor.00g133370 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g133370
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Protein ROOT PRIMORDIUM DEFECTIVE 1
Location	Csor_Chr14: 13442599 .. 13453096 (-)
RNA-Seq Expression	Csor.00g133370
Synteny	Csor.00g133370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTATCTTCTCAGTTCTTGACCCCTAGGGACTGGCATGTAACATCCCTTAGTTCAAACCTTCTTTGTGGTACTCCATTGTGGTTGCACTCCAATGTCGGTTGCAAGTACCAAAGAAAAGAAAATTTCAAGACTTGTTATACTTTAACACCTCGTGCCTCTGTTAAGATTGTCCGTAGTCGTCCATTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTACAAAAGCTGATAATCCTGCTGCTGTCTAAACCAAAGCATTATATACCAATCCACATTCTTTCCAAGTGTCGTGGCTATCTTTCCCTTCCCAAACCCCGCTCTCTTCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACTAAGCTATACCCCCAACTTTGTGTTCGTCTAACCCCAGTAGCAGCATCTCTTGCTAAGCAGGACTCCAATCTCAAATTGGTGATCTCTAACACCCTGGCTGAAAAGCTCCAGAAGTTACTTATGCTTTCTTCGCACCACAGGATTCTCTTATCCAAGCTGGTTCACCTTGCTCCCGACCTAAGCATGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTCAGGACTGTCGACACTTCATATGGCCGTGCACTGGAGCTTGTCTTCTGGGACCCAGAGTTGGCAAAGCCTTTACCTTGCCTTCAAGTTTCTTCACGTGAGCTAATAGTGGATAGACCTTTAAAATTCAACTTGTTGAAACTAAGAAAGGGACTGAACTTGAAAAGAGCCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCTGCGAGTGAGTTGGCTAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTAGTGCGAGAGGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGATCACTTGACACATTTTAGAAAAGATTTTGGGCTACCCAATAAACTTAGAGGAATGATTGTGAGGCATCCAGAGTTATTTTATGTGAGTCTGAAGGGTCAGAGAGACTCTGTATTCCTTGTAGAGGGGTTCAACGATAAGGGTCATCTAATAGAGAAGGATGAGACTTTGGCTATCAAAAATCAATGGATGAAGCTTTTGATGGAAGGGAAAAGGATGAGACGGGAGAAGAGGAAGGCTCAAATATATGACAGTAGATATGGAAATGATCATGAAAATCATAGTCATGACCATGAGATGGAAACTGACTATGATGATGATTACGAAGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAGGATGAGGAGAGTGATCTGCCAAGCAATAGGTCAAATGGAGACTTTTGGACTACAAATAATGCAGCAGATATTATAAATGGCGAAAATGGAGGACATATAGAACCGTGGTGATGGTTACTATAACTTGTTTGATATATTTGGAAGATTCATCAAAATATTTCTACAGTTAACGTAAACAAAGTGCCTCTTCAGTTTGTTTATTAAATTCAGAAAAAGCACTTTGTGAACATAAAGGTCAGGCTTGGAAGCTCAAAGGATGTTTAAATGTAGCCTGGTGATCTTTAGGAAGGGCTGAAGCCACTGCCTCTTGGCTCATGTATTTGTGCTTGAGCAAGGTCCCCATGAATGTATGCTCTGCTGATATAACACTATACCTTCTCCAGCTGTATATTGAACTTGCTTGTCATGTTCGTTTATCTCCTCAAAATGTAGAATGATTGGAATACCTTATGGAGTGTGAACAAAACTTCTCCCTAATCAAGAGGGATGTATGAGAGATAAGTCCTAACTCCTGTTTACGTGTACCATTTGATACACTAAGACAACATATTCCAGTTAATGAATAATGTAAATATTCAGATATAGTTCGGTACCTCGTCTCTACTCCTTGGTCGCTGGCAGTGAATGTATTCAGATTAATTTTCTCCTCTTTGGGACAGTGTTAATAAGAGGGTATTTTCATTTTTTGTTTACTAATTACTCATTTACTGTTTCTTATTTTTAGTTTCTAAGAAGCATGTGTTTAGCAACTATTGTTCCTTCTCGTTTCTCATTTTTAAGAAACAAGAAACAATTATGAATCACTTTTTTTCTTTCGTATAAAACAGAAAACATGGAATACGAAACAGGATCCTCACCAAATAAGTCCTAATTCTTCTGTTAAACATGTGAATAATGTTTAAAAATTTCCTCCCCATAATTTTGATTATATGTATGTATCACGTCTTGTGTATTTGCGGGAGCATTATGGATGGATCTTTCTAGCTTTGGTTGTATCCTTAGTATATGCTCCTAAACTGATGAATTGGCTTCTGATGACTGCACAGTAACAGATATTCTGTGTGGACAGATACGGGTCAAACATTTTTATCCATACTATGATGTGTTACACGTTTTGCCATATATCCTTAATTTCAGTTCTCTGCAGGTGTATTAATCTTATGCCTATTTTACTGCTGTTTTCTGAGGTTTGTCTAGCTTTTTATACACAGAATCATTGTTTATGATTTTTAATATATTTTCTTATTTTGATTCAGAAAATAGATAGGTGATGCCAGACATCTTCACTGACGAGACTTTGTTTCTTCTTGATGTTTGTTGGACTCTAGTTGTTTGATGAACACACATACCAATTATTACAAATCAAAAGGTTTGTTAAAAGACACACCCACGCCATCTTTCAGCAGAAAGCATACTTGAAATGTGCGTCATGTTTTGTGCAATTGATATGCATGCATTTGTGCTAATCATTTGTGTTGAATGTTTACTTTAGGTGAGTTCGTGATAACTTTTAGAAGGTTAAACCGTGTTTTAGTCATTCAAAAGTACTTATCAAAATTTTAATGTTGATTAGTTACTTAGCAAAAGTGACTATGTTCGATGAAAGGAAGCGCTTAATGAGTGTTCTTTTAAAAAATACTTACTCTTAAAAGTTACCTCAAGGTATGTTCATTGTGAATACAATACTTATATTACAAATTGTGCAATCATGTGCTTTGTGCTCCGTGTAATTGATATGCATGCATTTGTGTTCATTATTTATGCTGAATGTTTATCTTGCAAAGGGTTTAGGAAGAGTTGATGTTCTTAGAAACTCACAGAAGCTAAATTTTATAAGCTTGTGTGGAGGGCACATATTCTGTCACTAGCAATCTGATTTGGTCCCTACTAGTGTTCTGAAAAGGCCAACAAAGCATGTGTCTAGTCACCACGATGCGACTTCCTGCAATGTAGATGAAAACAAAGGAATCGACGAACATCGAAAACAAAGCATAATGATGATGGTATCAGTTTGAGTTTTCAAATGTTCTTATCAATTATTGCGTTAAACCTTTTCTCCTAGCATGTATTAGACTTGCAATTCTCAGAAAACATCTCCTGCAACCTTTTTTAATGCATGTATGTTTAGAGCCTTAGTTGGAGGAAGCAAAGGAAGTTTCCTAAATCAAAATGAACTTTTTGTTGGAAATGATAACCTTTTGGTGAATCTTCCAATAAAAAGTGGGACATAGCATAATCATATGCATCAAATTTACAGTAAATAAATGCATAAAAAGCTTATATAACTTATTAGTCATGCAATTCAAAGTATTCATTGTTTATTATCTGTAGGATTTGTAAGTTGTAATGAGCCATCTCTGACAGATAAAGATGAAAAAGAAAGGCTTGCAAATTTTTTTGAAGTATTGGGATACTGTTTCAGGCTTTTCAGGGTCCATGCTTTGCCTTCTTAATAGCCAACAGAACCATCAAAGAAGCAGCTAAGTTAAACCAACCAACCATTTGCTTTCATTTTGTTGGCTTTTAAGGCATTGCAAACTTCAATGGTCCAGAAAAAAGGCCCCAACAGATAGATTCTCGTAAGAATATTCTTCCTTATAATTGCTTCATTTGTTTAGCAAAATTTAGACCTTAGAATCCTTTTCACATTGTGTTTTCTTCATTCTTTCTAAGACTTTAGACTAACTTCAATATAAATATTTTGAAACTCAACTTAGACGTGAAATAAACTCATATATCATTTGATCCATGAAGTTTATGCTACATTTTACTTGATGCATCTAACTTTTCTTCAATACACTTTCTAATATGATAAGCTTTCGAGTGTCAATATACCATTTATACAGGTACCCATTCAAAGAAATCATATACCATTTAGACAAGAGGTATCTACTTGAAGAGGTCATATACCATTTAGACAGGTATACACTCGAATAGGTTATATACCATTTAGACATGTATCCACTCAAACTGATCATACACCATTTGGACAGGTATCCACTCGAATGGGTCATATACCATTTAGACGGATATCCACTCTGAGAAGTCATATACCATTTAGACGGGTATCCACTCGAAGAGGTGAGATATTTAAATTTCTTGAAGTAGGTAGTATATTGATTAATGGTAGAGAAAGAGGGACAAAAAGTGTTGAGAGTTGCATGATAAGTGGGAGAATATGATGAGTAGAGAGAGAGAATGAATATATTGGGAAGAGAAGCAGCTAGGAATGGCACTCTATACAAAGAGCATGCCTTCCCATTGCAAAAGCTTTAGTTTTCCCCTTCCTTGTGCATGCTTTTTATTACTCTAATCATGTCTGTTCCCTTAACCTAATTACTTCCATTCCCCCAAACACTCATATCTTCCTAACTACCTAACTATCTTCGTGTAATTTAATTAATATATATTTATTTTTATAATAGAGACTAAATAATTACAAATTAAAAAATAAAGCTAATAATTTATGAAAATAAATTTGTAGAATATTCAAAGATAATAGTAGCGTCCACGTCACCCAGTTGGCACCACCGACATGGTTACTATTAGAGAGTCTCATACTCTATGGCAAAATAGTAGTGACGTCAAAATTCCTTTTTATATATATATATATATATATATATATTTTTAGAGATAATTTAGAAGATAGGAATAAAATATTCTCAACTTTTCTTTAAAAAAAATTATTGGATATGAACATGATGTGTTTATATATTACACTTATTTAATTTAGGTTCATTTGTTTGTTTTTTTTTTTTTTTTTTTTTAATATTTTAGAAGGAATTAATTAATAGATTTGAAAACATTGAATAAAATTAGAGTTAAATATTGTTTGGTTAGTCAGCGTCGTTTCTTTACAAGCACGTCGGATAGAGGGTAGAGCCTCACTTAACTTGTCTCAAAGCATGTTTTACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGCATTTCGAGTGAATTTGAGTAGAATTTTTATTAGTTAATAATAGAAATCTAACGTGACACTGCATTTTATTAACATCTTTATCCTTATCAACTACCGTGGTCTCTAACATGTTCTTTTCTTCATCCATGATGATCACCGTCACTTTCTCGGTTGCTACTATTTTTTCTTTTTCTTCTCTTCTGAAAAAAGGACGAGACAAGATTTGACACCTCTCTGAGCTATTTAAGAGAGGTGTCAATTCAAGAACCAAATTGAATGATTTTTCAAACTTTGGACAAGATTGCATGATTTACAAACCTTGGGACATGGTCAACTTGTTGCCTAAACTTCAAGGACAGTTGTACACACATCAATCTCGCTAAATTAATAATAAAAAACAAGATACTTTAAAAAAAAGATGTAATATATTAATGTTACTCTTGAAAGTTCATGTGTATTTTAAAAAATATGGTACTCAGCGATTTTATCCCTACACTGACAATAAGGGTATTCATATATTTTCTTTTAAGAATTGGGTGATTTAAATCCCGTGAGGTTGACGGCGAATGTAGCAAATCAAAGCAAACAATATCTGTTAGCAGTGAGCAGACGATGTGTCAACGAGTACGTTGGGTCTCCAAGGGAGTAGATTGTGAGATCCCACATCAAAGAGTGTCGAAACCTCTCCAATGAGTTTTAAAAAAAAACATCAATTTTTAAGTTTATATTAGAGACAAATTCGTAAACTATTATATTCATACATTCAAACCCTCTTAAAAAACGTATGTAACGTGACCATTGTTCCGTCCTTATCTATCATTTAACATAAGTCCAAAATTTATAGATCTTCTAATATCCATCTAATATATAATTACTAATCATGTCAGTATCCAATCGATATTTTATGTGTGTAGAAGTTATGAATCTCGTCTTTATGAGATCTAAGATATTTTACAACAAAATGGATAAGACCCAAAACATTATAGAAAGCATATTCTTTTAATCTAAAACTTTTATGAACAAATTGAATAGATATGTTTCATACTTAGTTTATCATGTTCTTCATTTTTTTTATTTGATATAATATTAAGTGCATTTAATTTATAATTCGAGAGAGGTCGGTTTGCCGACTCGCTTAAAACCCCCCACCATCGTTGTTCGTTGTCACTTCTGAGAAATTTTTAGGAAGAGAGGCGCAACGAAACGAAACGACGAATCCATAGGGAGTGAAAACCGTGTGTTTATCTCATCCTTTCCTTCTCAAAATCCCTTAATTTGTTGTTCGATTTCATTGTGTTTTTCTTCTTTCTGTGAATCCCCTTTTCCCTTCACGAGGTTTCCTTTCGGATTCTTTCCCTTTTTCCTCTTCTTCTTCGGATCATTCGCGGAATTTTGTCGATTTCTGTTTCTGTTTCTGTTTCTGTTTCTGTTCCTGTCTGATTTCATGCTTCCTTTGTTCTCGATTGCACATAGCGATTGTTCATTGTTCTATTTTGGAGTGTTTTTATTTTGTGGGTATGATTCTTGTTATTTCATTGTTCATTGAATCATAGGTTTTATGTTTTTTTTCCGTTCGTAATTAGACTTGATATGAAAAATAAGAACTGGGTTTGTGTGGAACTTTCATGCTTGCTCGAATGTTCATCTTGTGTTCTTGATATTTATTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGAATGTTCATCTGTTTATGGGTTTGCTATTTTTTTTTCTTAAACAAGTTTCCTTGATTCTGTGTTGATCCAAATGCATTATCTCTTCAGCTTTTTTTACCAGCAAGATTTCTGCATTTGATTCCAAAGAAATAGATAGTCAAGGAGTGAATAATCATGTCTTACCAACAGCAAAATATGGATAAGTTCTTACACAAGTATTGTAGTAATTGTATTTGTCTTTTTAGGAATGCAAAGCTGTAGAGAAAGGAGGGAACTACTATGAGTTCTTTCATAATACAAGATTGGTTAAGCCGACTATCTTGCACTTTCAGGTATTGCCACGGACAATGTTCGATTCTCCGTTTTCGACTCTTAACTATAATGAAGATAGGTTGATACACTATTTGACACGTTCTATACGTAGGTCATGCTATTGGTTGGTAGTTTCGTTCTCTAGTTATTTTCGACTTATTTTTGGTAAAGGGTAGCTCATGATTGTTCTCAAATGATATATGGGCAACTTTTCGTGTTAAATGGTCTGTTTATTTGTTAGATTTGATATCAATCGTGTCCATGTCTGAGGCGAAATCGTTATTGAGTTTCTGTTGTTGGTTCCTGTGCTTATACCATCTTCCCGAGCGCTTTTGAGGAAAAGAAATGATTATTTACTTTTGTCTTGTAGTTAAGGAACTTGGTCTGGGCAACTTCAAAACACGATGTCTATTTGATGTCGAACTATTCTGTCATGCATTGGTCATCTTTATCTGGCAACTTATCTGAAATCCTCAATTTTTCCGGGCATGTTGCTCCTACAGAGGTCGGTATCACACTTACTATCATCTTTGTGCACAAATCAGCTCAGTTATTAACAGAAGCATGAGATTACCTTACACATTATGTTTATATCATGGGAGTTCTGATATGAAACGATTAATGTTCTTGTTATGTTCATCGAAAATAACACTTTCCCGTTTCGAAGGATACTAGCCAAGATTAGGAGTTACGGTTTGGTGCGGTAGTTGTCTCTTAATTCCCTATGCCCTCTGTAACTGGCTTTCTATGCCTGGTCATGCAGAAACATGCTGGAAGTTTATTAGAGGGTTTTACACAAACTCAGATTAGCACGCTTGCCGTCAAGGATAATTTTCTGGTTGCGGGTGGATTCCAAGGAGAGCTTACTTGTAAGGTCAGCGCGTACTTAGTGATTTTAAGCTCATTTTCTCTTGCTGTGTTTCGGTATTCTCTTGGTCCATGAAATAAGAACCCTATTCCTGGAAAAGATCGTTGATTGATAATATTTATCGGGTTCGATGGTTTGGTTAATTGGTGCAATGTTGAGAGGAATGATATGGATTCGACATTTTGTGATATGATCTAGTGAATTTTCTATTAGTATATTAGTACTTTTGTTCGTTCGTGCAGCGTTTGGATAAACAAGGAGTAAGCTTCTGTACTCGTACTACACATGACGATAACGCCATTACAAATGCTGTTGAAATATATGAAAGCATGAGGTATTTTTAGAACTTAGTCTGTGTTTTGTTTGGTTTGGTTGGATTATTTACATGAATTCAAGCTGGTTTATTTGTTTTTGCAGCGGTGAGTTACATTTCATGGCAGCAAATAATGATTGCAGCATGAGAGAGTATGAGATGGAGAGGTTTCAGCTTTTGAATCACTTCCATTTTCCTTGGCCAGTAAATGTATGTCTGCTTCAGATTTTACATGAACGATTTCCTGTTCCCTCTCCATAGTAGACATGTTTAAAAACCGTGAGGCCGACGGCAATACGTAATGGGCCAAAGTGAACAATATCTGTTAGTGGTGGGCTTGAGTTGTTACAAATGGTATCAGAGTCAGACATGGGGTGGTGTGCCAGCAAGAATGCTAGGCTCCTAAGAGGGGTGGATTGTGAGATCCCATATTAGTTGGAGAGGGGAATGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGGCACGTTTTAGAATCGTGAGGTTGACGGCGATACGTAACGGCCCAAAGCGGACAATATCTACTAGAGGTGGGCTTGGGATGTTACAAATGGTATCTGAGCCTGGCACCGAGCGGTGTGCCAGTGAGGACATTGGACCCTCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGAAGGGAAACGAAGTATTCCTTATAAGGGTGTGGAAACCTCTCCATAGTAGACGGGTTTAAAAATCGTGAGGTTGACGGCAATATGTAATGAGCCAAAGTGGACAATATCTGCTAGTGGTGGGCTTGGGTTGTTACAAATGGTATCAGAGGCAGACACTGGGTGGTTTAGGGTCAAGAAGAATGCTGGGCTCATAAGACGGGTAGATTGTGAGATCCCACATTAGTTGAGAGGGGAATGAAGCATTCCTTGTAAGGGTGTAAAAACCTCTTCCTAGTAGACATGTTTTAAAATCGTGAGGTTGACGGTGATATGTAACGCGCCAAAGCGAACAATATCTACTAGCGGTGGGCTTGGGACGTTACAAATGGTATATCAGCCTGACACCGAGCGGTGTGCCAGTGAGGACGCTAGACCCTTGAGAGGGGTGGATTGTGAGATCCCACATCTGTTCGGGAGGAAAACGAAGTATTCCTTATAAGGGTGTAGAAACCTCACCATAGTAATGCGTTTTAAAATCTTGAGGTTGATGGTGATACGTAATGGGCTAAAACGGTCAATATCTGCTATGCAACTATAAGTAGTCTATGAAATAATAGGATTTTTTGTTTGGAATAATTGTTTGAATGTTCATGGAAAATATTTTAATGATTCTTTGTTAATCATTCTGTTGCTGCAGCACACGTCGGTGAGCCCAGACCGCAGGCTTATGGTTGTCGTTGGGGATCACACGGATGGATTGATTGTCGATTCCCGAAACGGAACGGTAAGTTATCTGCTGTGCAGATTTGTACATAATGTTTCATATAGCAATGCTCTTTTCCTGTTCAAACTGGTCGATTTCACCGCACGTATTCTCTCTGTATGAATGTATAGGATTCCTATACAAGACGGTATCGATGGAAACTCATGGATCAGTGACATTGACATGACATTCTGTAACGTGTTTCAGGCTATAGGCACGGTTGTTGGTCATCGAGATTACTCCTTTGCGTCCGCTTGGCACCCCGATGGTCGCATGTTTGCTACAGGAAATCAAGACAAGACATGCCGAGTATGGGACATAAGGAAGTTCTCATCACCCGTTGCAGTTCTAAAGGGACACATCGGTGCTGCACGCTCAATTCGTTACTCATCAGACGGTCAATTCATGGTAGTTGCGGAACCAGCAGACTTCGTACATGTGTATAGCACGAGTGCAGACTACAAAAAGAGACAAGAAATCGATTTCTTCGGAGAGATATCGGGGGTGTCGTTGAGCCCAGACGATGAGTCGTTGTTCATAGGAATATGGGATAGGACGTACGCGAGCTTACTACAATACAACAGGAGGCATAGCTATGGATATATTGATTCATTCTTGTAG

mRNA sequence

ATGGCTTTATCTTCTCAGTTCTTGACCCCTAGGGACTGGCATGTAACATCCCTTAGTTCAAACCTTCTTTGTGGTACTCCATTGTGGTTGCACTCCAATGTCGGTTGCAAGTACCAAAGAAAAGAAAATTTCAAGACTTGTTATACTTTAACACCTCGTGCCTCTGTTAAGATTGTCCGTAGTCGTCCATTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTACAAAAGCTGATAATCCTGCTGCTGTCTAAACCAAAGCATTATATACCAATCCACATTCTTTCCAAGTGTCGTGGCTATCTTTCCCTTCCCAAACCCCGCTCTCTTCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACTAAGCTATACCCCCAACTTTGTGTTCGTCTAACCCCAGTAGCAGCATCTCTTGCTAAGCAGGACTCCAATCTCAAATTGGTGATCTCTAACACCCTGGCTGAAAAGCTCCAGAAGTTACTTATGCTTTCTTCGCACCACAGGATTCTCTTATCCAAGCTGGTTCACCTTGCTCCCGACCTAAGCATGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTCAGGACTGTCGACACTTCATATGGCCGTGCACTGGAGCTTGTCTTCTGGGACCCAGAGTTGGCAAAGCCTTTACCTTGCCTTCAAGTTTCTTCACGTGAGCTAATAGTGGATAGACCTTTAAAATTCAACTTGTTGAAACTAAGAAAGGGACTGAACTTGAAAAGAGCCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCTGCGAGTGAGTTGGCTAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTAGTGCGAGAGGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGATCACTTGACACATTTTAGAAAAGATTTTGGGCTACCCAATAAACTTAGAGGAATGATTGTGAGGCATCCAGAGTTATTTTATGTGAGTCTGAAGGGTCAGAGAGACTCTGTATTCCTTGTAGAGGGGTTCAACGATAAGGGTCATCTAATAGAGAAGGATGAGACTTTGGCTATCAAAAATCAATGGATGAAGCTTTTGATGGAAGGGAAAAGGATGAGACGGGAGAAGAGGAAGGCTCAAATATATGACAGTAGATATGGAAATGATCATGAAAATCATAGTCATGACCATGAGATGGAAACTGACTATGATGATGATTACGAAGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAGGATGAGGAGAGTGATCTGCCAAGCAATAGGTCAAATGGAGACTTTTGGACTACAAATAATGCAGCAGATATTATAAATGGCGAAAATGGAGGACATATAGAACCGTGTGTTCTGAAAAGGCCAACAAAGCATGTGTCTAGTCACCACGATGCGACTTCCTGCAATGTAGATGAAAACAAAGGAATCGACGAACATCGAAAACAAAGCATAATGATGATGGAATGCAAAGCTGTAGAGAAAGGAGGGAACTACTATGAGTTCTTTCATAATACAAGATTGGTTAAGCCGACTATCTTGCACTTTCAGTTAAGGAACTTGGTCTGGGCAACTTCAAAACACGATGTCTATTTGATGTCGAACTATTCTGTCATGCATTGGTCATCTTTATCTGGCAACTTATCTGAAATCCTCAATTTTTCCGGGCATGTTGCTCCTACAGAGAAACATGCTGGAAGTTTATTAGAGGGTTTTACACAAACTCAGATTAGCACGCTTGCCGTCAAGGATAATTTTCTGGTTGCGGGTGGATTCCAAGGAGAGCTTACTTGTAAGCGTTTGGATAAACAAGGAGTAAGCTTCTGTACTCGTACTACACATGACGATAACGCCATTACAAATGCTGTTGAAATATATGAAAGCATGAGCGGTGAGTTACATTTCATGGCAGCAAATAATGATTGCAGCATGAGAGAGTATGAGATGGAGAGGTTTCAGCTTTTGAATCACTTCCATTTTCCTTGGCCAGTAAATCACACGTCGGTGAGCCCAGACCGCAGGCTTATGGTTGTCGTTGGGGATCACACGGATGGATTGATTGTCGATTCCCGAAACGGAACGGCTATAGGCACGGTTGTTGGTCATCGAGATTACTCCTTTGCGTCCGCTTGGCACCCCGATGGTCGCATGTTTGCTACAGGAAATCAAGACAAGACATGCCGAGTATGGGACATAAGGAAGTTCTCATCACCCGTTGCAGTTCTAAAGGGACACATCGGTGCTGCACGCTCAATTCGTTACTCATCAGACGGTCAATTCATGGTAGTTGCGGAACCAGCAGACTTCGTACATGTGTATAGCACGAGTGCAGACTACAAAAAGAGACAAGAAATCGATTTCTTCGGAGAGATATCGGGGGTGTCGTTGAGCCCAGACGATGAGTCGTTGTTCATAGGAATATGGGATAGGACGTACGCGAGCTTACTACAATACAACAGGAGGCATAGCTATGGATATATTGATTCATTCTTGTAG

Coding sequence (CDS)

ATGGCTTTATCTTCTCAGTTCTTGACCCCTAGGGACTGGCATGTAACATCCCTTAGTTCAAACCTTCTTTGTGGTACTCCATTGTGGTTGCACTCCAATGTCGGTTGCAAGTACCAAAGAAAAGAAAATTTCAAGACTTGTTATACTTTAACACCTCGTGCCTCTGTTAAGATTGTCCGTAGTCGTCCATTAGATCGGCATGCTGTAAAACATAACAAAACTCGATTTGTACAAAAGCTGATAATCCTGCTGCTGTCTAAACCAAAGCATTATATACCAATCCACATTCTTTCCAAGTGTCGTGGCTATCTTTCCCTTCCCAAACCCCGCTCTCTTCTTTCAATGATTCATCGTTATCCTTCCATTTTTGAACTTTTTTCAATCCCTTATCCACCCACACCACTCAATGCAACTAAGCTATACCCCCAACTTTGTGTTCGTCTAACCCCAGTAGCAGCATCTCTTGCTAAGCAGGACTCCAATCTCAAATTGGTGATCTCTAACACCCTGGCTGAAAAGCTCCAGAAGTTACTTATGCTTTCTTCGCACCACAGGATTCTCTTATCCAAGCTGGTTCACCTTGCTCCCGACCTAAGCATGCCCCCAAATTTTAGGTCCCGTCTCTGTAATGATTATCCAGAAAAATTCAGGACTGTCGACACTTCATATGGCCGTGCACTGGAGCTTGTCTTCTGGGACCCAGAGTTGGCAAAGCCTTTACCTTGCCTTCAAGTTTCTTCACGTGAGCTAATAGTGGATAGACCTTTAAAATTCAACTTGTTGAAACTAAGAAAGGGACTGAACTTGAAAAGAGCCCACCAGGAATTTCTAATTAAGTTCAGGGATTTGCCAGATGTTTGCCCTTACAAAACTCCTGCGAGTGAGTTGGCTAAGGAGTCTCTCGAGTCAGAGAAACGAGCTTGTGCTGTAGTGCGAGAGGTATTGGGGATGATGATTGAGAAGAGGACTTTAATAGATCACTTGACACATTTTAGAAAAGATTTTGGGCTACCCAATAAACTTAGAGGAATGATTGTGAGGCATCCAGAGTTATTTTATGTGAGTCTGAAGGGTCAGAGAGACTCTGTATTCCTTGTAGAGGGGTTCAACGATAAGGGTCATCTAATAGAGAAGGATGAGACTTTGGCTATCAAAAATCAATGGATGAAGCTTTTGATGGAAGGGAAAAGGATGAGACGGGAGAAGAGGAAGGCTCAAATATATGACAGTAGATATGGAAATGATCATGAAAATCATAGTCATGACCATGAGATGGAAACTGACTATGATGATGATTACGAAGATGGTTTTGAGAGTTTATTTCAGTATGAGGATTTAGATTTTGAGGATGAGGAGAGTGATCTGCCAAGCAATAGGTCAAATGGAGACTTTTGGACTACAAATAATGCAGCAGATATTATAAATGGCGAAAATGGAGGACATATAGAACCGTGTGTTCTGAAAAGGCCAACAAAGCATGTGTCTAGTCACCACGATGCGACTTCCTGCAATGTAGATGAAAACAAAGGAATCGACGAACATCGAAAACAAAGCATAATGATGATGGAATGCAAAGCTGTAGAGAAAGGAGGGAACTACTATGAGTTCTTTCATAATACAAGATTGGTTAAGCCGACTATCTTGCACTTTCAGTTAAGGAACTTGGTCTGGGCAACTTCAAAACACGATGTCTATTTGATGTCGAACTATTCTGTCATGCATTGGTCATCTTTATCTGGCAACTTATCTGAAATCCTCAATTTTTCCGGGCATGTTGCTCCTACAGAGAAACATGCTGGAAGTTTATTAGAGGGTTTTACACAAACTCAGATTAGCACGCTTGCCGTCAAGGATAATTTTCTGGTTGCGGGTGGATTCCAAGGAGAGCTTACTTGTAAGCGTTTGGATAAACAAGGAGTAAGCTTCTGTACTCGTACTACACATGACGATAACGCCATTACAAATGCTGTTGAAATATATGAAAGCATGAGCGGTGAGTTACATTTCATGGCAGCAAATAATGATTGCAGCATGAGAGAGTATGAGATGGAGAGGTTTCAGCTTTTGAATCACTTCCATTTTCCTTGGCCAGTAAATCACACGTCGGTGAGCCCAGACCGCAGGCTTATGGTTGTCGTTGGGGATCACACGGATGGATTGATTGTCGATTCCCGAAACGGAACGGCTATAGGCACGGTTGTTGGTCATCGAGATTACTCCTTTGCGTCCGCTTGGCACCCCGATGGTCGCATGTTTGCTACAGGAAATCAAGACAAGACATGCCGAGTATGGGACATAAGGAAGTTCTCATCACCCGTTGCAGTTCTAAAGGGACACATCGGTGCTGCACGCTCAATTCGTTACTCATCAGACGGTCAATTCATGGTAGTTGCGGAACCAGCAGACTTCGTACATGTGTATAGCACGAGTGCAGACTACAAAAAGAGACAAGAAATCGATTTCTTCGGAGAGATATCGGGGGTGTCGTTGAGCCCAGACGATGAGTCGTTGTTCATAGGAATATGGGATAGGACGTACGCGAGCTTACTACAATACAACAGGAGGCATAGCTATGGATATATTGATTCATTCTTGTAG

Protein sequence

MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVRSRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPLPCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRDSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHSHDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGGHIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFFHNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEKHAGSLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAVEIYESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHTDGLIVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLKGHIGAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESLFIGIWDRTYASLLQYNRRHSYGYIDSFL

Homology

[Close]

BLAST of Csor.00g133370 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.5e-60
Identity = 155/420 (36.90%), Postives = 226/420 (53.81%), Query Frame = 0


Query: 53  RASVKIVRSRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSL 112
           +A+VK  +  P D    +  K + V KL  +L+++P   + +  L + R  L L + R L
Sbjct: 52  QAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRL 111

Query: 113 LSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAE 172
           ++++ R+P +F++              +Y  L  RLTP A  L   +  L+         
Sbjct: 112 IALLRRFPGVFDVVE----------EGVY-SLRFRLTPAAERLYLDELRLRNESEGLAVA 171

Query: 173 KLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFW 232
           KL+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP+ FR V    G ALEL  W
Sbjct: 172 KLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHW 231

Query: 233 DPELAKPLPCL--------QVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLP 292
           DPELA     L        +   R LI+DRPLKFN ++L KGL L R     + +F+++P
Sbjct: 232 DPELAVSAAELAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMP 291

Query: 293 DVCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGM 352
            + PY    S L   S E EK AC VV E+L + +EKRTL+DHLTHFR++F     LRGM
Sbjct: 292 YISPY-ADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGM 351

Query: 353 IVRHPELFYVSLKGQRDSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRK 412
           I+RHP++FYVS KG RDSVFL E + D   L+EK++ + +K + M+ L+   R  R +  
Sbjct: 352 IIRHPDMFYVSFKGDRDSVFLREAYKD-SQLVEKNQLVLLKEK-MRALVAVPRFPR-RAA 411

Query: 413 AQIYDSRYGNDHENHSHDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDF 465
               +   G +    S D   + +YDD+ ++G          D ED  S+L   +S+ D+
Sbjct: 412 VGTGEEAEGMNGSLQSRDQVSDEEYDDE-DEGLS--------DMEDLISELSGGKSDADY 447

[Close]

BLAST of Csor.00g133370 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.7e-59
Identity = 158/431 (36.66%), Postives = 228/431 (52.90%), Query Frame = 0


Query: 53  RASVKIVRSRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSL 112
           +A+VK  +  P D    +  K + V KL  +L+S P   + +  L + R  L L + R L
Sbjct: 58  QAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRL 117

Query: 113 LSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAE 172
           ++++ R+P +FE+              +Y  L  RLTP A  L   + +LK         
Sbjct: 118 IALLKRFPGVFEVVE----------EGVY-SLRFRLTPAAERLYLDELHLKNESEGLAVT 177

Query: 173 KLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFW 232
           KL+KLLM+S   RIL+ K+ HL  DL +PP FR  +C  YP+ FR V    G  LEL  W
Sbjct: 178 KLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHW 237

Query: 233 DPELA--------KPLPCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLP 292
           DPELA        +     +   R LI+DRPLKFN +KL +GL L R     + +F+++P
Sbjct: 238 DPELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMP 297

Query: 293 DVCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGM 352
            + PY +  S L   S E EK AC VV E+L + +EKRTL+DHLTHFR++F     LRGM
Sbjct: 298 YISPY-SDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGM 357

Query: 353 IVRHPELFYVSLKGQRDSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRK 412
           ++RHP++FYVSLKG RDSVFL E + +   L+EK + + +K + M+ L+   R  R    
Sbjct: 358 LIRHPDMFYVSLKGDRDSVFLREAYKN-SQLVEKSKLVLLKEK-MRALVAVPRFPRRGVP 417

Query: 413 AQIYDSRYGNDHENHSHDHEME-TDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSN-- 470
           A   ++    D  N +     E +D +DD ++G          D ED  S++   +S+  
Sbjct: 418 ATSEEA----DRTNGAAQMLSEGSDVEDDEDEGLS--------DMEDLISEISGGKSDTD 462

[Close]

BLAST of Csor.00g133370 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-58
Identity = 161/439 (36.67%), Postives = 232/439 (52.85%), Query Frame = 0


Query: 45  KTCYTLTP-RASVKIVRSRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGY 104
           KT   + P RA+VK  +    D    +  K + V  +  +L+S+P   + +  L K R  
Sbjct: 64  KTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRD 123

Query: 105 LSLPKPRSLLSMIHRYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLK 164
           L L K R  ++++ +YP +FE+             +    L  ++T  A  L   +  ++
Sbjct: 124 LGLKKRRRFIALLRKYPGVFEI-----------VEEGAYSLRFKMTSEAERLYLDEMRIR 183

Query: 165 LVISNTLAEKLQKLLMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSY 224
             + + L  KL+KL+M+S   RILL K+ HL  DL +P  FR  +C  YP+ FR V T  
Sbjct: 184 NELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPR 243

Query: 225 GRALELVFWDPELAKPLPCL--------QVSSRELIVDRPLKFNLLKLRKGLNLKRAHQE 284
           G ALEL  WDPELA     L        +   R LI+DRP KFN +KL +GLNL ++   
Sbjct: 244 GPALELTHWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETR 303

Query: 285 FLIKFRDLPDVCPYKTPASELAKESLESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDF 344
            + +FRD+  + PYK   S L   +LE EK AC V+ E+L +  EKRTL+DHLTHFR++F
Sbjct: 304 KISQFRDMQYISPYK-DFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEF 363

Query: 345 GLPNKLRGMIVRHPELFYVSLKGQRDSVFLVEGFNDKGHLIEKDETLAIKNQWMKLL--- 404
               +LRGM++RHP+LFYVSLKG+RDSVFL E + +   LI+KD    +K +   L+   
Sbjct: 364 RFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAYRN-SELIDKDPLTLVKEKMRALVSVP 423

Query: 405 ----MEGKRMRREKRKAQIYDSRYGNDHENHSHDHEMETDYDD--DYEDGFESLFQYEDL 464
                 G R   E R+ +I  S    + E    D E  +D D   + EDG       +D 
Sbjct: 424 RFPRRGGPRKDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGND----DDG 483

[Close]

BLAST of Csor.00g133370 vs. ExPASy Swiss-Prot
Match: Q9Y7K5 (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.03 PE=4 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-26
Identity = 96/334 (28.74%), Postives = 157/334 (47.01%), Query Frame = 0


Query: 532 NYYEFFHNTRLVKPTIL--HFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFS 591
           ++YEF     L  P  L  H  L   V    +H V  +SN S+   ++L  N  +I++  
Sbjct: 117 SFYEF--QRFLKNPNCLRNHHHLCKSVKVVGEHSVIYVSNNSIRMENTLHDNSVQIIDLK 176

Query: 592 GHVAPTEKHAGSLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHD 651
            ++   +K A S L+  T   +  L         G   G+  C    K G SF TR   D
Sbjct: 177 NNI--LQKKAISCLD--TTNAVGCL---------GTLYGQY-CIFNFKNG-SFSTRKLSD 236

Query: 652 DNAITNAVEIYESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRL 711
           D+   N ++++     E  F+   ND ++   +++R   +  +     VN   +  +  L
Sbjct: 237 DS--INHIQLF----SEKKFILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPL 296

Query: 712 MVVVGDHTDGLIVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKF 771
            +V  D  D +++D R+  ++   + H D     +WHP+G + ATG QD T +VWDIR  
Sbjct: 297 ALVCTDSKDAMLIDIRS-NSVSAKLPHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRAL 356

Query: 772 SSPVAVLKGHIGAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVS 831
                 L   + A  ++ +S  G+ + V E ADFV ++ T   +   Q IDFFGEI+G +
Sbjct: 357 GKSFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKL-FNTSQVIDFFGEIAGTA 416

Query: 832 LSPDDESLFIGIWDRTYASLLQYNR--RHSYGYI 862
            S   +SLFIG+ D     +L++ R  +H   +I
Sbjct: 417 YSSSGDSLFIGVDDPMLGGILEFRRPLQHPLSFI 425

[Close]

BLAST of Csor.00g133370 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.2e-19
Identity = 97/377 (25.73%), Postives = 176/377 (46.68%), Query Frame = 0


Query: 59  VRSRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLP-KPRSLLSMIH 118
           VR    D +     K R V K   L+LS+P H I I +L      L L  K     + + 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 119 RYPSIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKL 178
           ++P +FE++  P          +   L  RLT  A    + +    L        +L+KL
Sbjct: 107 KFPHVFEIYEHP----------VQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 166

Query: 179 LMLSSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVD--TSYGRALELVFWDPE 238
           +M+S+  RI L  +     +  +P +F   +   +P+ FR +D   +  + +E+V  DP 
Sbjct: 167 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN 226

Query: 239 LAKPLPCLQVSSREL------IVDRPLKFN-LLKLRKGLNLKRAHQEFLIKFRDLPDVCP 298
           L+    C     RE+      I    ++F+ ++    G  + +  +  + K++ LP   P
Sbjct: 227 LS---ICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSP 286

Query: 299 YKTPASELAKESLES----EKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGM 358
           Y+   S     S+E+    EKR+ A + E+L + +EK+  ++ + HFR    LP KL+  
Sbjct: 287 YE-DISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEF 346

Query: 359 IVRHPELFYVSLK---GQRDSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRRE 418
           +++H  +FY+S +   G+  +VFL EG+  +G L+E ++    + +  +L++     R+ 
Sbjct: 347 LLQHQGIFYISTRGNYGKLHTVFLREGYK-RGELVEPNDVYLARRRLAELVLMSP--RKA 406

[Close]

BLAST of Csor.00g133370 vs. NCBI nr
Match: KAG6582056.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1756 bits (4548), Expect = 0.0
Identity = 865/865 (100.00%), Postives = 865/865 (100.00%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFFHNT 540
           HIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFFHNT
Sbjct: 481 HIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFFHNT 540

Query: 541 RLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEKHAG 600
           RLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEKHAG
Sbjct: 541 RLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEKHAG 600

Query: 601 SLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAVEIY 660
           SLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAVEIY
Sbjct: 601 SLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAVEIY 660

Query: 661 ESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHTDGL 720
           ESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHTDGL
Sbjct: 661 ESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHTDGL 720

Query: 721 IVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLKGHI 780
           IVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLKGHI
Sbjct: 721 IVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLKGHI 780

Query: 781 GAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESLFIG 840
           GAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESLFIG
Sbjct: 781 GAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESLFIG 840

Query: 841 IWDRTYASLLQYNRRHSYGYIDSFL 865
           IWDRTYASLLQYNRRHSYGYIDSFL
Sbjct: 841 IWDRTYASLLQYNRRHSYGYIDSFL 865

[Close]

BLAST of Csor.00g133370 vs. NCBI nr
Match: XP_022955645.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >KAG7018490.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 969 bits (2504), Expect = 0.0
Identity = 483/484 (99.79%), Postives = 484/484 (100.00%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEP 484
           HI+P
Sbjct: 481 HIKP 484

[Close]

BLAST of Csor.00g133370 vs. NCBI nr
Match: XP_023527715.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 949 bits (2454), Expect = 0.0
Identity = 476/484 (98.35%), Postives = 478/484 (98.76%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSSQFLTPRDW+VT LSSNLL GT LWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR
Sbjct: 1   MALSSQFLTPRDWYVTPLSSNLLRGTTLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AASLAKQDSNLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHEN+S
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENYS 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIIN  NGG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINDANGG 480

Query: 481 HIEP 484
           HIEP
Sbjct: 481 HIEP 484

[Close]

BLAST of Csor.00g133370 vs. NCBI nr
Match: XP_022979770.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita maxima] >XP_022979771.1 protein WHAT'S THIS FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 948 bits (2451), Expect = 0.0
Identity = 476/484 (98.35%), Postives = 477/484 (98.55%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSSQFLTPRDWHVTS SSNLL GTPLWLHSNVGCKYQRKENF+T YTLTPRASVKIVR
Sbjct: 1   MALSSQFLTPRDWHVTSRSSNLLRGTPLWLHSNVGCKYQRKENFETSYTLTPRASVKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           S PLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP
Sbjct: 61  SCPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AASLAKQDSNLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAK L
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKTL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADI NGENGG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADITNGENGG 480

Query: 481 HIEP 484
           HIEP
Sbjct: 481 HIEP 484

[Close]

BLAST of Csor.00g133370 vs. NCBI nr
Match: XP_038904265.1 (protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 875 bits (2261), Expect = 1.05e-312
Identity = 438/484 (90.50%), Postives = 460/484 (95.04%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           M LSS FLTP DWHVT LSSNLLCG PLWLHSNV CKYQRKENF+T YTLTP +S+KIVR
Sbjct: 1   MVLSSHFLTPTDWHVTLLSSNLLCGNPLWLHSNVSCKYQRKENFETRYTLTPCSSLKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATK+YPQLCVRLTP AASLAKQDS+LKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKVYPQLCVRLTPAAASLAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCLQV SRELIVDRPLKFNLL+LRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVPSRELIVDRPLKFNLLRLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGF++KG L++KDETLAIKNQWMKLLMEGKRMR+EK+KA+ YDS+YGN+H+N +
Sbjct: 361 DSVFLVEGFDEKGVLVKKDETLAIKNQWMKLLMEGKRMRQEKKKARKYDSKYGNEHKNDN 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEMETD+DDDY+DGFESLFQYEDLDFEDE SDLPSN  NGDFW TNN  DIIN  +GG
Sbjct: 421 HDHEMETDFDDDYDDGFESLFQYEDLDFEDERSDLPSNWLNGDFWITNNV-DIINDADGG 480

Query: 481 HIEP 484
            IEP
Sbjct: 481 RIEP 483

[Close]

BLAST of Csor.00g133370 vs. ExPASy TrEMBL
Match: A0A6J1GVP1 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 SV=1)

HSP 1 Score: 969 bits (2504), Expect = 0.0
Identity = 483/484 (99.79%), Postives = 484/484 (100.00%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR
Sbjct: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP
Sbjct: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480

Query: 481 HIEP 484
           HI+P
Sbjct: 481 HIKP 484

[Close]

BLAST of Csor.00g133370 vs. ExPASy TrEMBL
Match: A0A6J1IUA5 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111479376 PE=4 SV=1)

HSP 1 Score: 948 bits (2451), Expect = 0.0
Identity = 476/484 (98.35%), Postives = 477/484 (98.55%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSSQFLTPRDWHVTS SSNLL GTPLWLHSNVGCKYQRKENF+T YTLTPRASVKIVR
Sbjct: 1   MALSSQFLTPRDWHVTSRSSNLLRGTPLWLHSNVGCKYQRKENFETSYTLTPRASVKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           S PLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP
Sbjct: 61  SCPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AASLAKQDSNLKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASLAKQDSNLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAK L
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKTL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS
Sbjct: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADI NGENGG
Sbjct: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADITNGENGG 480

Query: 481 HIEP 484
           HIEP
Sbjct: 481 HIEP 484

[Close]

BLAST of Csor.00g133370 vs. ExPASy TrEMBL
Match: A0A0A0KU86 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 SV=1)

HSP 1 Score: 858 bits (2216), Expect = 3.45e-306
Identity = 430/484 (88.84%), Postives = 453/484 (93.60%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MAL S FLTP DWHVTSLSSNLL G+PLWLHS V  K QRKENF+T YTLTP +S+KIVR
Sbjct: 1   MALCSHFLTPTDWHVTSLSSNLLSGSPLWLHSKVDFKCQRKENFRTHYTLTPCSSIKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLTP AAS+AKQDS+LK+VISN LAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPAAASIAKQDSDLKMVISNKLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLS+PPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSLPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PC+QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYK PASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKNPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMM+EKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMVEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGF+DKG L+EKDETLAIKNQWM LL E KR+RREK+KAQIYDS+YGNDHEN++
Sbjct: 361 DSVFLVEGFDDKGVLLEKDETLAIKNQWMTLLKEAKRLRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEME DYDDDY+DGFESLFQYEDLDFEDE S +PS  SNGDFWTTNN  DI N  +GG
Sbjct: 421 HDHEMENDYDDDYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNV-DISNDADGG 480

Query: 481 HIEP 484
           HIEP
Sbjct: 481 HIEP 483

[Close]

BLAST of Csor.00g133370 vs. ExPASy TrEMBL
Match: A0A5A7TP08 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003590 PE=4 SV=1)

HSP 1 Score: 851 bits (2199), Expect = 1.27e-303
Identity = 431/484 (89.05%), Postives = 453/484 (93.60%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSS+FLTP DWH  SLSSNLL G+PLWLHS V  K QRKENF T YTLTP +S+KIVR
Sbjct: 1   MALSSRFLTPTDWHA-SLSSNLLSGSPLWLHSKVDFKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT  AAS+AKQDS+LKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PC+QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPD+CPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDICPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGF+DKG L+EKDETLAIKN+WM LL EGKRMRREK+KAQIYDS+YGNDHEN++
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEME DYDD+Y+DGFESLFQYEDLDFEDE S +PS  SNGDFWTTNN  DI N  +G 
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNV-DISNDTDGS 480

Query: 481 HIEP 484
           HIEP
Sbjct: 481 HIEP 482

[Close]

BLAST of Csor.00g133370 vs. ExPASy TrEMBL
Match: A0A1S3BYB2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4 SV=1)

HSP 1 Score: 848 bits (2192), Expect = 1.46e-302
Identity = 431/484 (89.05%), Postives = 451/484 (93.18%), Query Frame = 0


Query: 1   MALSSQFLTPRDWHVTSLSSNLLCGTPLWLHSNVGCKYQRKENFKTCYTLTPRASVKIVR 60
           MALSS FLTP DWH  SLSSNLL G+PLWLHS V  K QRKENF T YTLTP +S+KIVR
Sbjct: 1   MALSSHFLTPADWHA-SLSSNLLSGSPLWLHSKVDLKCQRKENFITHYTLTPCSSIKIVR 60

Query: 61  SRPLDRHAVKHNKTRFVQKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYP 120
           SR LDRHAVKHNKTRFVQKLIILLLSKPKHYIP+HILSKCRGYLSLP+PRSLLSMIHRYP
Sbjct: 61  SRSLDRHAVKHNKTRFVQKLIILLLSKPKHYIPLHILSKCRGYLSLPRPRSLLSMIHRYP 120

Query: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLML 180
           SIFELFSIPYPPTPLNATKLYPQLCVRLT  AAS+AKQDS+LKLVISNTLAEKLQKLLML
Sbjct: 121 SIFELFSIPYPPTPLNATKLYPQLCVRLTAAAASIAKQDSDLKLVISNTLAEKLQKLLML 180

Query: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPL 240
           SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELV WDPELAKPL
Sbjct: 181 SSHHRILLSKLVHLAPDLSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVSWDPELAKPL 240

Query: 241 PCLQVSSRELIVDRPLKFNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKES 300
           PC+QV SRELIVDRPLKFNLL+LRKGLNLKR HQEFLIKFRDLPDVCPYKTPASELAKES
Sbjct: 241 PCIQVPSRELIVDRPLKFNLLRLRKGLNLKRTHQEFLIKFRDLPDVCPYKTPASELAKES 300

Query: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360
           LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR
Sbjct: 301 LESEKRACAVVREVLGMMIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQR 360

Query: 361 DSVFLVEGFNDKGHLIEKDETLAIKNQWMKLLMEGKRMRREKRKAQIYDSRYGNDHENHS 420
           DSVFLVEGF+DKG L+EKDETLAIKN+WM LL EGKRMRREK+KAQIYDS+YGNDHEN++
Sbjct: 361 DSVFLVEGFDDKGALLEKDETLAIKNRWMALLKEGKRMRREKKKAQIYDSKYGNDHENNN 420

Query: 421 HDHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAADIINGENGG 480
           HDHEME DYDD+Y+DGFESLFQYEDLDFEDE S +PS  SNGDFWTTNN  DI N  +  
Sbjct: 421 HDHEMENDYDDNYDDGFESLFQYEDLDFEDENSGVPSIWSNGDFWTTNNV-DISNDTDES 480

Query: 481 HIEP 484
           HIEP
Sbjct: 481 HIEP 482

[Close]

BLAST of Csor.00g133370 vs. TAIR 10
Match: AT5G56190.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 513.1 bits (1320), Expect = 4.4e-145
Identity = 259/447 (57.94%), Postives = 317/447 (70.92%), Query Frame = 0


Query: 422 DHEMETDYD-DDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAAD--IINGEN 481
           D  M  +YD DD ED   + F   D+D  D E +        DF   N AAD       N
Sbjct: 5   DEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVE--------DFDQLNKAADTSAAQARN 64

Query: 482 GGHIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFFH 541
           G  I+       T     +           + I     +S    +C   EKG ++YEF  
Sbjct: 65  GKDIQGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDES--AKKCMNTEKGSSFYEFRR 124

Query: 542 NTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEKH 601
           N+R V+ TILHFQLRNLVWATSKHDVYL+SNYS+ HWSSL+G  SEILN  GHVAP+EKH
Sbjct: 125 NSRSVRSTILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKH 184

Query: 602 AGSLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAVE 661
             SLLEGFT+TQ+STLAVK+  LVAGGFQGEL CK LD+ GVSFC+RTT+ +NAITNAV+
Sbjct: 185 PESLLEGFTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVD 244

Query: 662 IYESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHTD 721
           IY + SG LHFMA+NNDC +R+++MER++L+  F + WPVNH+S+SPD +L+ VVGD  D
Sbjct: 245 IYRNSSGALHFMASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPD 304

Query: 722 GLIVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLKG 781
           GL+VD+ NG  IGT+ GH DYSFASAWHP+G  FATGNQDKTCR+WD RK S  VAVLKG
Sbjct: 305 GLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKG 364

Query: 782 HIGAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESLF 841
           ++GA RSIR++SDG+++ +AEPADFVH+Y T + YKK QEIDFFGEISG+S SPD ESLF
Sbjct: 365 NLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLF 424

Query: 842 IGIWDRTYASLLQYNRRHSYGYIDSFL 866
           IG+WDRTY SLL+Y R   Y Y+DS L
Sbjct: 425 IGVWDRTYGSLLEYGRTRDYTYLDSLL 441

[Close]

BLAST of Csor.00g133370 vs. TAIR 10
Match: AT5G56190.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 513.1 bits (1320), Expect = 4.4e-145
Identity = 259/447 (57.94%), Postives = 317/447 (70.92%), Query Frame = 0


Query: 422 DHEMETDYD-DDYEDGFESLFQYEDLDFEDEESDLPSNRSNGDFWTTNNAAD--IINGEN 481
           D  M  +YD DD ED   + F   D+D  D E +        DF   N AAD       N
Sbjct: 11  DEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVE--------DFDQLNKAADTSAAQARN 70

Query: 482 GGHIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFFH 541
           G  I+       T     +           + I     +S    +C   EKG ++YEF  
Sbjct: 71  GKDIQGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDES--AKKCMNTEKGSSFYEFRR 130

Query: 542 NTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEKH 601
           N+R V+ TILHFQLRNLVWATSKHDVYL+SNYS+ HWSSL+G  SEILN  GHVAP+EKH
Sbjct: 131 NSRSVRSTILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKH 190

Query: 602 AGSLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAVE 661
             SLLEGFT+TQ+STLAVK+  LVAGGFQGEL CK LD+ GVSFC+RTT+ +NAITNAV+
Sbjct: 191 PESLLEGFTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVD 250

Query: 662 IYESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHTD 721
           IY + SG LHFMA+NNDC +R+++MER++L+  F + WPVNH+S+SPD +L+ VVGD  D
Sbjct: 251 IYRNSSGALHFMASNNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPD 310

Query: 722 GLIVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLKG 781
           GL+VD+ NG  IGT+ GH DYSFASAWHP+G  FATGNQDKTCR+WD RK S  VAVLKG
Sbjct: 311 GLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKG 370

Query: 782 HIGAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESLF 841
           ++GA RSIR++SDG+++ +AEPADFVH+Y T + YKK QEIDFFGEISG+S SPD ESLF
Sbjct: 371 NLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLF 430

Query: 842 IGIWDRTYASLLQYNRRHSYGYIDSFL 866
           IG+WDRTY SLL+Y R   Y Y+DS L
Sbjct: 431 IGVWDRTYGSLLEYGRTRDYTYLDSLL 447

[Close]

BLAST of Csor.00g133370 vs. TAIR 10
Match: AT3G13340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 505.4 bits (1300), Expect = 9.3e-143
Identity = 253/448 (56.47%), Postives = 317/448 (70.76%), Query Frame = 0


Query: 422 DHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGD--FWTTNNAADII--NGE 481
           D E   D DD+ ED        +D+D E    DL ++ S+ +   ++ N  AD       
Sbjct: 8   DAEYMEDVDDEMED------VEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQAR 67

Query: 482 NGGHIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFF 541
            G  I+     R       +           + +    + S  +  CK  +KGG +Y+F+
Sbjct: 68  KGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKV--CKVTQKGGLFYDFW 127

Query: 542 HNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEK 601
            N+R +K TILHFQLRNLVWATSKHDVYLMSN+ V H+SSL+    E+LN  GHVAP+EK
Sbjct: 128 RNSRSIKSTILHFQLRNLVWATSKHDVYLMSNFLVTHYSSLTSGKHEVLNVRGHVAPSEK 187

Query: 602 HAGSLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAV 661
           H GSLLEGFTQTQ+STLAVKD+FLVAGGFQGEL CK LD+ GVSFC+R T+DDNAITNA+
Sbjct: 188 HPGSLLEGFTQTQVSTLAVKDDFLVAGGFQGELICKHLDRPGVSFCSRMTYDDNAITNAI 247

Query: 662 EIYESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHT 721
           EIY   SG LHF A+NNDC +R+++MER+QL+ HF FPWPVNH S+SPD +L+ +VGD+ 
Sbjct: 248 EIYNKPSGALHFTASNNDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNP 307

Query: 722 DGLIVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLK 781
           +GLIVD   G  + T+ GH D+SFASAWHPDG  F+TGNQDKTCRVWDIR  S  V VLK
Sbjct: 308 EGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLK 367

Query: 782 GHIGAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESL 841
           G++GA RSIRY+SDG++M +AEPADFVHVY  S  Y+  QEIDFFGEISG+S SPD E+L
Sbjct: 368 GNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEAL 427

Query: 842 FIGIWDRTYASLLQYNRRHSYGYIDSFL 866
           FIG+WDRTY SLL++ RR +Y Y+DS+L
Sbjct: 428 FIGVWDRTYGSLLEFGRRRNYSYLDSYL 447

[Close]

BLAST of Csor.00g133370 vs. TAIR 10
Match: AT3G13340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 505.4 bits (1300), Expect = 9.3e-143
Identity = 253/448 (56.47%), Postives = 317/448 (70.76%), Query Frame = 0


Query: 422 DHEMETDYDDDYEDGFESLFQYEDLDFEDEESDLPSNRSNGD--FWTTNNAADII--NGE 481
           D E   D DD+ ED        +D+D E    DL ++ S+ +   ++ N  AD       
Sbjct: 8   DAEYMEDVDDEMED------VEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQAR 67

Query: 482 NGGHIEPCVLKRPTKHVSSHHDATSCNVDENKGIDEHRKQSIMMMECKAVEKGGNYYEFF 541
            G  I+     R       +           + +    + S  +  CK  +KGG +Y+F+
Sbjct: 68  KGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKV--CKVTQKGGLFYDFW 127

Query: 542 HNTRLVKPTILHFQLRNLVWATSKHDVYLMSNYSVMHWSSLSGNLSEILNFSGHVAPTEK 601
            N+R +K TILHFQLRNLVWATSKHDVYLMSN+ V H+SSL+    E+LN  GHVAP+EK
Sbjct: 128 RNSRSIKSTILHFQLRNLVWATSKHDVYLMSNFLVTHYSSLTSGKHEVLNVRGHVAPSEK 187

Query: 602 HAGSLLEGFTQTQISTLAVKDNFLVAGGFQGELTCKRLDKQGVSFCTRTTHDDNAITNAV 661
           H GSLLEGFTQTQ+STLAVKD+FLVAGGFQGEL CK LD+ GVSFC+R T+DDNAITNA+
Sbjct: 188 HPGSLLEGFTQTQVSTLAVKDDFLVAGGFQGELICKHLDRPGVSFCSRMTYDDNAITNAI 247

Query: 662 EIYESMSGELHFMAANNDCSMREYEMERFQLLNHFHFPWPVNHTSVSPDRRLMVVVGDHT 721
           EIY   SG LHF A+NNDC +R+++MER+QL+ HF FPWPVNH S+SPD +L+ +VGD+ 
Sbjct: 248 EIYNKPSGALHFTASNNDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNP 307

Query: 722 DGLIVDSRNGTAIGTVVGHRDYSFASAWHPDGRMFATGNQDKTCRVWDIRKFSSPVAVLK 781
           +GLIVD   G  + T+ GH D+SFASAWHPDG  F+TGNQDKTCRVWDIR  S  V VLK
Sbjct: 308 EGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLK 367

Query: 782 GHIGAARSIRYSSDGQFMVVAEPADFVHVYSTSADYKKRQEIDFFGEISGVSLSPDDESL 841
           G++GA RSIRY+SDG++M +AEPADFVHVY  S  Y+  QEIDFFGEISG+S SPD E+L
Sbjct: 368 GNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEAL 427

Query: 842 FIGIWDRTYASLLQYNRRHSYGYIDSFL 866
           FIG+WDRTY SLL++ RR +Y Y+DS+L
Sbjct: 428 FIGVWDRTYGSLLEFGRRRNYSYLDSYL 447

[Close]

BLAST of Csor.00g133370 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 500.7 bits (1288), Expect = 2.3e-141
Identity = 277/457 (60.61%), Postives = 332/457 (72.65%), Query Frame = 0


Query: 19  SSNLLCGTPLWL-HSNVGCKYQRKENFKTCYTLTPRASVKIVRSRPLDRHAVKHNKTRFV 78
           SS  L   PL +  SNV  K   K+       ++  A  KIVRS  LDRH VK N+ RFV
Sbjct: 20  SSFFLPSIPLEIRRSNVTTKTSSKKLGSLSLNISCSAH-KIVRSPSLDRHVVKQNRVRFV 79

Query: 79  QKLIILLLSKPKHYIPIHILSKCRGYLSLPKPRSLLSMIHRYPSIFELFSIPYPPTPLNA 138
           QKL  LLLSKPKHYIPI IL KCR YL +  P ++LSMI RYP+IFELF+ P P  P+NA
Sbjct: 80  QKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFELFTTPTPHLPMNA 139

Query: 139 TKLYPQLCVRLTPVAASLAKQDSNLKLVISNTLAEKLQKLLMLSSHHRILLSKLVHLAPD 198
           TK   QLCVRLT  A+SLA Q+ NLK  IS+ LA KLQKLLMLSSH R+LLSKLVH+APD
Sbjct: 140 TKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHRRLLLSKLVHIAPD 199

Query: 199 LSMPPNFRSRLCNDYPEKFRTVDTSYGRALELVFWDPELAKPLPCLQVSSRELIVDRPLK 258
              PPNFRSRLCNDYP+KF+TVDTSYGRALELV  DPELA  +P  +V  R LIVDRPLK
Sbjct: 200 FGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELANQMPSPEV-DRGLIVDRPLK 259

Query: 259 FNLLKLRKGLNLKRAHQEFLIKFRDLPDVCPYKTPASELAKESLESEKRACAVVREVLGM 318
           F  L LR+GLNLKR HQ FLIKFR+ PDVCPYK  +  LA ES+E+EKRACAVVREVLG+
Sbjct: 260 FKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYLASESIEAEKRACAVVREVLGL 319

Query: 319 MIEKRTLIDHLTHFRKDFGLPNKLRGMIVRHPELFYVSLKGQRDSVFLVEGFNDKGHLIE 378
            +EKRTLIDHLTHFRK+F LPNKLR +IVRHPELFYVS+KG RDSVFLVE +ND G L++
Sbjct: 320 TVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSIKGMRDSVFLVEAYNDNGDLLD 379

Query: 379 KDETLAIKNQWMKLLMEGKRMRREKRK--AQIYDSRYGNDHENHSHDHEMETDYDDDYED 438
           KDE L I+ + + L+ EGKR+RRE+R+  A + D       ++     + ++D DD+YED
Sbjct: 380 KDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVEEKRKDDETIDDYDSDLDDEYED 439

Query: 439 GFESLFQYEDL------DFEDEESDLPSNRSNGDFWT 467
           GFE+LF  EDL      D ED++ +   N  + ++W+
Sbjct: 440 GFENLFDSEDLGVEYHFDEEDDDDEAGVNGESVEYWS 474

The following BLAST results are available for this feature:

BLAST of Csor.00g133370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6TTV8	2.5e-60	36.90	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	4.7e-59	36.66	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	1.1e-58	36.67	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q9Y7K5	1.8e-26	28.74	Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pomb...	[more]
Q689D6	8.2e-19	25.73	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of Csor.00g133370 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582056.1	0.0	100.00	Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022955645.1	0.0	99.79	protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] >XP_022955646.1 protein WHAT'S...	[more]
XP_023527715.1	0.0	98.35	protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022979770.1	0.0	98.35	protein WHAT'S THIS FACTOR 1 [Cucurbita maxima] >XP_022979771.1 protein WHAT'S T...	[more]
XP_038904265.1	1.05e-312	90.50	protein WHAT'S THIS FACTOR 1, chloroplastic [Benincasa hispida] >XP_038904305.1 ...	[more]

BLAST of Csor.00g133370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVP1	0.0	99.79	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111457587 PE=4 ...	[more]
A0A6J1IUA5	0.0	98.35	protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111479376 PE=4 SV...	[more]
A0A0A0KU86	3.45e-306	88.84	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015830 PE=4 S...	[more]
A0A5A7TP08	1.27e-303	89.05	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BYB2	1.46e-302	89.05	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103494529 PE=4...	[more]

BLAST of Csor.00g133370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56190.1	4.4e-145	57.94	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G56190.2	4.4e-145	57.94	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G13340.1	9.3e-143	56.47	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G13340.2	9.3e-143	56.47	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G62990.1	2.3e-141	60.61	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 726..765 e-value: 2.5E-7 score: 40.4 coord: 769..808 e-value: 0.56 score: 18.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 733..767 score: 13.382416
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 646..860 e-value: 2.7E-26 score: 94.3
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 59..397 e-value: 3.3E-92 score: 308.9
None	No IPR available	PANTHER	PTHR43991	WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED	coord: 520..864
None	No IPR available	PANTHER	PTHR43991:SF21	GAMYB-BINDING PROTEIN	coord: 520..864
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 733..767 score: 11.101955
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 548..845

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g133370.m01	Csor.00g133370.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding