Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTCAATCGTCTTCTCCAATTATACAAAGATTTGGAAGACAAGTTCGAGAGAATAGGAGGCTATACAATCCCTTCTTCGGTGATTCCAAGAGATTCTACTATGTCGATCATTACCGTGTCCAGCATTTTAAGCCCAGAGGACCTCGGCGATGGTTTCAGGATCCAAGAACCGTATTGGTTGTTGTGTTTGCGGGTTCTGGGGTTTTTTATCACCGTGTATTATGGGAATTTAGAAACCATACCTTATACTAAACGAAGGCATTTCGTACTCTTGTCTAGAGCTATGGAGAGGAGCCTCGGGGAGTCGCAATTTGAGCAAATGAAGGCAGCTTTCAAGGGTAAAATACTGCCTGCTGTACACCCAGAAAGTGTTAGAGTAAGATTGATAGCTAAGGATATAATTGATGCATTACAAAGAGGGTTGAAGCAAGAGAATGTTTGGAGTGATTTAGGGTATGCATCAGAGGCTGCGATTGGAGCCCCTGAAGGGAGTGGCAATGAGACATTGATGGCGCTTAGGGACTCTGGGGCTGGGAAGATGGAAGGTAAATGGTACCGTGAAGACGAAATTCTTGATGACAAATGGGTCGAACGCAGTAGAAAGAAGGTCAGAAACAGGGGTCCCAAGCAGATATCTCGCATTTGGATGGATTGA
mRNA sequence
ATGGGTTTCAATCGTCTTCTCCAATTATACAAAGATTTGGAAGACAAGTTCGAGAGAATAGGAGGCTATACAATCCCTTCTTCGGTGATTCCAAGAGATTCTACTATGTCGATCATTACCGTGTCCAGCATTTTAAGCCCAGAGGACCTCGGCGATGGTTTCAGGATCCAAGAACCGTATTGGTTGTTGTGTTTGCGGGTTCTGGGGTTTTTTATCACCGTGTATTATGGGAATTTAGAAACCATACCTTATACTAAACGAAGGCATTTCGTACTCTTGTCTAGAGCTATGGAGAGGAGCCTCGGGGAGTCGCAATTTGAGCAAATGAAGGCAGCTTTCAAGGGTAAAATACTGCCTGCTGTACACCCAGAAAGTGTTAGAGTAAGATTGATAGCTAAGGATATAATTGATGCATTACAAAGAGGGTTGAAGCAAGAGAATGTTTGGAGTGATTTAGGGTATGCATCAGAGGCTGCGATTGGAGCCCCTGAAGGGAGTGGCAATGAGACATTGATGGCGCTTAGGGACTCTGGGGCTGGGAAGATGGAAGGTAAATGGTACCGTGAAGACGAAATTCTTGATGACAAATGGGTCGAACGCAGTAGAAAGAAGGTCAGAAACAGGGGTCCCAAGCAGATATCTCGCATTTGGATGGATTGA
Coding sequence (CDS)
ATGGGTTTCAATCGTCTTCTCCAATTATACAAAGATTTGGAAGACAAGTTCGAGAGAATAGGAGGCTATACAATCCCTTCTTCGGTGATTCCAAGAGATTCTACTATGTCGATCATTACCGTGTCCAGCATTTTAAGCCCAGAGGACCTCGGCGATGGTTTCAGGATCCAAGAACCGTATTGGTTGTTGTGTTTGCGGGTTCTGGGGTTTTTTATCACCGTGTATTATGGGAATTTAGAAACCATACCTTATACTAAACGAAGGCATTTCGTACTCTTGTCTAGAGCTATGGAGAGGAGCCTCGGGGAGTCGCAATTTGAGCAAATGAAGGCAGCTTTCAAGGGTAAAATACTGCCTGCTGTACACCCAGAAAGTGTTAGAGTAAGATTGATAGCTAAGGATATAATTGATGCATTACAAAGAGGGTTGAAGCAAGAGAATGTTTGGAGTGATTTAGGGTATGCATCAGAGGCTGCGATTGGAGCCCCTGAAGGGAGTGGCAATGAGACATTGATGGCGCTTAGGGACTCTGGGGCTGGGAAGATGGAAGGTAAATGGTACCGTGAAGACGAAATTCTTGATGACAAATGGGTCGAACGCAGTAGAAAGAAGGTCAGAAACAGGGGTCCCAAGCAGATATCTCGCATTTGGATGGATTGA
Protein sequence
MGFNRLLQLYKDLEDKFERIGGYTIPSSVIPRDSTMSIITVSSILSPEDLGDGFRIQEPYWLLCLRVLGFFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFKGKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMALRDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRGPKQISRIWMD
Homology
BLAST of Csor.00g133100 vs. NCBI nr
Match:
KAG6576770.1 (hypothetical protein SDJN03_24344, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 441 bits (1134), Expect = 3.81e-156
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
Query: 1 MGFNRLLQLYKDLEDKFERIGGYTIPSSVIPRDSTMSIITVSSILSPEDLGDGFRIQEPY 60
MGFNRLLQLYKDLEDKFERIGGYTIPSSVIPRDSTMSIITVSSILSPEDLGDGFRIQEPY
Sbjct: 1 MGFNRLLQLYKDLEDKFERIGGYTIPSSVIPRDSTMSIITVSSILSPEDLGDGFRIQEPY 60
Query: 61 WLLCLRVLGFFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFKGKILPA 120
WLLCLRVLGFFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFKGKILPA
Sbjct: 61 WLLCLRVLGFFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFKGKILPA 120
Query: 121 VHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMALRDSGAG 180
VHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMALRDSGAG
Sbjct: 121 VHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMALRDSGAG 180
Query: 181 KMEGKWYREDEILDDKWVERSRKKVRNRGPKQISRIWMD 219
KMEGKWYREDEILDDKWVERSRKKVRNRGPKQISRIWMD
Sbjct: 181 KMEGKWYREDEILDDKWVERSRKKVRNRGPKQISRIWMD 219
BLAST of Csor.00g133100 vs. NCBI nr
Match:
XP_022922487.1 (uncharacterized protein LOC111430479 isoform X2 [Cucurbita moschata])
HSP 1 Score: 269 bits (688), Expect = 2.42e-85
Identity = 138/155 (89.03%), Postives = 143/155 (92.26%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P +L + G FITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK
Sbjct: 105 QDPRTVLVVVFAGSGVFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 164
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPAVHPESVRVRLIAKD+IDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL
Sbjct: 165 GKILPAVHPESVRVRLIAKDMIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 224
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRG 209
RDSGAGKMEGKWYREDEILDDKWVERSRKK +G
Sbjct: 225 RDSGAGKMEGKWYREDEILDDKWVERSRKKGEKQG 259
BLAST of Csor.00g133100 vs. NCBI nr
Match:
XP_022922484.1 (uncharacterized protein LOC111430479 isoform X1 [Cucurbita moschata] >XP_022922486.1 uncharacterized protein LOC111430479 isoform X1 [Cucurbita moschata])
HSP 1 Score: 269 bits (688), Expect = 4.05e-85
Identity = 138/155 (89.03%), Postives = 143/155 (92.26%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P +L + G FITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK
Sbjct: 105 QDPRTVLVVVFAGSGVFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 164
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPAVHPESVRVRLIAKD+IDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL
Sbjct: 165 GKILPAVHPESVRVRLIAKDMIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 224
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRG 209
RDSGAGKMEGKWYREDEILDDKWVERSRKK +G
Sbjct: 225 RDSGAGKMEGKWYREDEILDDKWVERSRKKGEKQG 259
BLAST of Csor.00g133100 vs. NCBI nr
Match:
KAG6576765.1 (Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 271 bits (692), Expect = 4.40e-84
Identity = 139/155 (89.68%), Postives = 144/155 (92.90%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P +L + G FITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK
Sbjct: 249 QDPRTVLVVVFAGSGVFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 308
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL
Sbjct: 309 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 368
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRG 209
RDSGAGKMEGKWYREDEILDDKWVERSRKK + +G
Sbjct: 369 RDSGAGKMEGKWYREDEILDDKWVERSRKKGQKQG 403
BLAST of Csor.00g133100 vs. NCBI nr
Match:
XP_023552618.1 (uncharacterized protein LOC111810215 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 266 bits (680), Expect = 6.12e-84
Identity = 136/155 (87.74%), Postives = 142/155 (91.61%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P +L + G FITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK
Sbjct: 103 QDPRTVLVVVFAGSGVFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 162
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPAVHPES+RVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL
Sbjct: 163 GKILPAVHPESIRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 222
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRG 209
RDSGAGKME KWY EDEILDDKWVERSRKK + +G
Sbjct: 223 RDSGAGKMEAKWYHEDEILDDKWVERSRKKGQKQG 257
BLAST of Csor.00g133100 vs. ExPASy TrEMBL
Match:
A0A6J1E3E3 (uncharacterized protein LOC111430479 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430479 PE=3 SV=1)
HSP 1 Score: 269 bits (688), Expect = 1.17e-85
Identity = 138/155 (89.03%), Postives = 143/155 (92.26%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P +L + G FITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK
Sbjct: 105 QDPRTVLVVVFAGSGVFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 164
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPAVHPESVRVRLIAKD+IDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL
Sbjct: 165 GKILPAVHPESVRVRLIAKDMIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 224
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRG 209
RDSGAGKMEGKWYREDEILDDKWVERSRKK +G
Sbjct: 225 RDSGAGKMEGKWYREDEILDDKWVERSRKKGEKQG 259
BLAST of Csor.00g133100 vs. ExPASy TrEMBL
Match:
A0A6J1E3I5 (uncharacterized protein LOC111430479 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430479 PE=4 SV=1)
HSP 1 Score: 269 bits (688), Expect = 1.96e-85
Identity = 138/155 (89.03%), Postives = 143/155 (92.26%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P +L + G FITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK
Sbjct: 105 QDPRTVLVVVFAGSGVFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 164
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPAVHPESVRVRLIAKD+IDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL
Sbjct: 165 GKILPAVHPESVRVRLIAKDMIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 224
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRG 209
RDSGAGKMEGKWYREDEILDDKWVERSRKK +G
Sbjct: 225 RDSGAGKMEGKWYREDEILDDKWVERSRKKGEKQG 259
BLAST of Csor.00g133100 vs. ExPASy TrEMBL
Match:
A0A0A0LB58 (Peptidase_M48 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G177990 PE=3 SV=1)
HSP 1 Score: 251 bits (640), Expect = 2.67e-78
Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P LL + VLG FITVYYGNLET+PYTKRRHFVLLS+ MER +GES+FEQMKAAFK
Sbjct: 100 QDPRTLLIVVVLGSGVFITVYYGNLETVPYTKRRHFVLLSKPMERKIGESEFEQMKAAFK 159
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPA+HPESVRVRLIAKDII+ALQRGL+QENVW+DLGYASEA IGAPEGSG+ETLMAL
Sbjct: 160 GKILPAIHPESVRVRLIAKDIIEALQRGLRQENVWNDLGYASEAVIGAPEGSGHETLMAL 219
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKK 204
+DSG+ K+EGKWYREDEILDDKWVE SRKK
Sbjct: 220 KDSGSEKLEGKWYREDEILDDKWVEHSRKK 249
BLAST of Csor.00g133100 vs. ExPASy TrEMBL
Match:
A0A6J1G2G4 (uncharacterized protein LOC111450044 OS=Cucurbita moschata OX=3662 GN=LOC111450044 PE=3 SV=1)
HSP 1 Score: 249 bits (636), Expect = 9.83e-78
Identity = 127/155 (81.94%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
++P LL + + G +TVYYGNLETIPYTKRRHFVLLSRAMER LGESQFEQMKAAFK
Sbjct: 95 EDPRNLLIVVIAGSGVCVTVYYGNLETIPYTKRRHFVLLSRAMERRLGESQFEQMKAAFK 154
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPAVHPESVRVRLIAKDII+ALQRGLKQENVWSDLGYASEA +GAPEGSG+ETLMAL
Sbjct: 155 GKILPAVHPESVRVRLIAKDIIEALQRGLKQENVWSDLGYASEAVMGAPEGSGHETLMAL 214
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRG 209
R SGA KME KWYREDE+LDDKWVE SRKK + +G
Sbjct: 215 RGSGAEKMEDKWYREDEVLDDKWVESSRKKGQEKG 249
BLAST of Csor.00g133100 vs. ExPASy TrEMBL
Match:
A0A5D3E3G6 (Putative peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G00110 PE=3 SV=1)
HSP 1 Score: 249 bits (636), Expect = 1.07e-77
Identity = 125/156 (80.13%), Postives = 138/156 (88.46%), Query Frame = 0
Query: 57 QEPYWLLCLRVLG--FFITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQMKAAFK 116
Q+P LL + V G FITVYYGNLETIPYTKRRHFVLLS+ MER +GES+FEQMKAAFK
Sbjct: 100 QDPRTLLIVVVAGSGVFITVYYGNLETIPYTKRRHFVLLSKPMERKIGESEFEQMKAAFK 159
Query: 117 GKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYASEAAIGAPEGSGNETLMAL 176
GKILPA+HPESVR+RLIAKDII+ALQRGL+QENVWSDLGYASEA IGAPEGSG+ETL+AL
Sbjct: 160 GKILPAIHPESVRIRLIAKDIIEALQRGLRQENVWSDLGYASEAVIGAPEGSGHETLIAL 219
Query: 177 RDSGAGKMEGKWYREDEILDDKWVERSRKKVRNRGP 210
RDSG K+EGKWYREDEILDDKWVE SRKK + P
Sbjct: 220 RDSGNEKLEGKWYREDEILDDKWVEHSRKKGQGSQP 255
BLAST of Csor.00g133100 vs. TAIR 10
Match:
AT5G51740.1 (Peptidase family M48 family protein )
HSP 1 Score: 162.5 bits (410), Expect = 3.7e-40
Identity = 86/158 (54.43%), Postives = 114/158 (72.15%), Query Frame = 0
Query: 51 GDGFRIQEPYWLLCLRVLGF--FITVYYGNLETIPYTKRRHFVLLSRAMERSLGESQFEQ 110
G G Q P + + ++G IT+ GN ETIPYTKR HF+LLS+ ME+ LGE+QFEQ
Sbjct: 95 GPGRWFQNPRTVFTVVLVGSVGLITLIVGNTETIPYTKRTHFILLSKPMEKLLGETQFEQ 154
Query: 111 MKAAFKGKILPAVHPESVRVRLIAKDIIDALQRGLKQENVWSDLGYAS-EAAIGAPEGSG 170
+K ++GKILPA HPES+RVRLIAK++IDALQRGL E VWSDLGYAS E+++G G
Sbjct: 155 IKKTYQGKILPATHPESIRVRLIAKEVIDALQRGLSNERVWSDLGYASTESSLGGGSDKG 214
Query: 171 NETLMALRDSGAGKM-EGKWYREDEILDDKWVERSRKK 205
+ M + SG M + KW +ED++LDD+W+++SRKK
Sbjct: 215 VKE-MEMAMSGEDTMTDMKWSKEDQVLDDQWIQKSRKK 251
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6576770.1 | 3.81e-156 | 100.00 | hypothetical protein SDJN03_24344, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022922487.1 | 2.42e-85 | 89.03 | uncharacterized protein LOC111430479 isoform X2 [Cucurbita moschata] | [more] |
XP_022922484.1 | 4.05e-85 | 89.03 | uncharacterized protein LOC111430479 isoform X1 [Cucurbita moschata] >XP_0229224... | [more] |
KAG6576765.1 | 4.40e-84 | 89.68 | Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_023552618.1 | 6.12e-84 | 87.74 | uncharacterized protein LOC111810215 isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E3E3 | 1.17e-85 | 89.03 | uncharacterized protein LOC111430479 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1E3I5 | 1.96e-85 | 89.03 | uncharacterized protein LOC111430479 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A0A0LB58 | 2.67e-78 | 82.67 | Peptidase_M48 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G1779... | [more] |
A0A6J1G2G4 | 9.83e-78 | 81.94 | uncharacterized protein LOC111450044 OS=Cucurbita moschata OX=3662 GN=LOC1114500... | [more] |
A0A5D3E3G6 | 1.07e-77 | 80.13 | Putative peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G... | [more] |
Match Name | E-value | Identity | Description | |
AT5G51740.1 | 3.7e-40 | 54.43 | Peptidase family M48 family protein | [more] |