Csor.00g132550 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g132550
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA-directed RNA polymerase III subunit rpc6
Location	Csor_Chr02: 260303 .. 262646 (-)
RNA-Seq Expression	Csor.00g132550
Synteny	Csor.00g132550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTACCTCAAAACGACGACGGAGGCGACCTTCGCACCGAAATGGAAAAACAAAAACCCTCGAAACGACGACAACATCGTCGTAGAACGCTGGACAACGACTGTATAAAATACTTTTTAAATTTTTAAATTTTATTTATTTTCTAAATTTCTATTTTTTAATTCTTTTCCTTATTTCTTTATTTCTTTATTTCTTTCTTTAATTTATTTTTATGTTCATTTCTTTATAAATTATAAAACCATAGGCCTCCAATATGTACGTATGTACATACATGCACATATATACATACATATACATACGTACATATATAAACTTCACTCGTAGATCATATGTATGAAGGCAAATGAGAGCATGATCGTTCGAGATAGTACTAATAGATGGAATGAATATTCTAGTTTAATAACCTATAAATACTCACACTTGGAACTGTGTTAACTTGGAAGATGCACTTCGGACCGAGCAGTGTGCTAGTAAAGACGTTGAGTCACCTATATTTCTTATAAGAGTGTGAAAACTTCCATAGAAACTTTGAAGGAGAAGCTTAAAAAGACAATATATGCTAGCGGTGGGGTTAGATGGTTACAATTTGAAACTGAGTTACAAATGTGCCCGTTTTAAGAATCCAAAACTTTTTGGGCCATTTATGTAAATTTTCCCTTTTTCAATGGTCTCAAGAAAACTTAAAACCCCGAAGGCATCGGTCAGTCGTTAGGCTTCACTCCATCGCCCTTGTACGTTTTAGAGAAACTGAACGCCCCCTCGGGATCGATTTGCCGATCAAAACTAATATCGCCGCCGCTCGTCATCCCACATCTCCCCGCATCGTCTTCTCTCCGTCGCCTCTCGGGTTGGTTGTCTCTAGATTGCTTAAACCCTAGCTCTTTAGGGCGCTTCTCCATCGCTTTTGCGTTGCCACTGTTTCTGCAATTATCGTCTCTGAAATCTTGTAGTTCTGATATTTGATTTGAAGTCGCAGACTTTCAGGTATTTTTCCTGATTTCCTATGAAATTGCTTGAAGATCGATTCTTATATTATTTTATTTACTCTTCATTATGAATATATAAATGATTTACGCGCATATATATCATCTTGTTTTTGGTTTTTCTGATAGTTCCTAGCAACCATTTTCTTAACGTCTCTGCGAGTGGCTTGTTCTGCTAAGTTTACATATGATCGCTTCTCAATTTCTCACTTTTAGGTGCACGCGAAAGAAGAAAAATTGTGATTCTTCATTACCTATACTGCAGACCAAACTCAACGTGGTTTTTTCATGAATTTTTTTGGGATAATTGTTCATGGTGACACATATCATCCAGAACTCACAACAAAAATCTTTATGGATTTGAAATTGTTTTCCTCAAGTTCTATAGTTTTTGAAACAGCATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCCTATGAATTGTTGAATATAGTGCTTCTTTGTTATTTGTTCAGTCATCCCATTTCCAAGGCACAGTTGTTCTCTCAGCTCAGCTCAGCTCAGCATCATTTTCAATTTCCTTAATCACATCTCTTACAAATCTTCACGTTTCCACATCATTTTGTTTTTATCAATCTCATTATGCACATATCATTTAATGTTAATAGGAATGAGCAGATCACAAGGGCCTTCATCACTCAAAAGAAAAAGGCCAGAACCAGCTCATGGCCATGGAGGAGCTCTCATTGAGCATGAAAAAGTGCTGTATGACCTGATTTGCAGCAAGCAAAGCATGGGGATTTGGATTGGGGACATGAAAAGAGAAACAAAGTATCCTGACAATGTGGTAACTAAATCACTCAAGGCCCTTCAAGGCAGAGGCCTGATTAAACTAGTTGAACACTATCAAAACAAAGGGAAGAAATTCTACCTGTCAAAAGATTTCGAACCATCGAAAGAACTGACCGGCGGTAATTGGTACAGCGATGGAAAGCTCGACAGAGAATACATCAGTACTCTTAAAGGGTTCTGTGCTAGAATGATACAGAAGATGAAGGTGGCTACAATTGAAGGGATCGTGGACTCATTCAAGAAGAGCGGAGCGTCCAAAGTGGACTTGTCTAGGGAGCAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATGAAGTGATGGAGGTGAAGAGCACTGGCGCAGGGGAGTTTGATTTTATTCCTGTTGGGAAGATTTGTTATAAGAGCTATGCTAAAGGAGTTAAAGGGGAGCCCAAAACAGGGGCTATGGCTTCTACTCCTTGTGGAGTCTGTCCAAGGATTAATCATTGCACCCCAAATGGCATCATTTCGCCTAGGACTTGTGTGTATTACACCAAGTGGTTAGAATTTTAG

mRNA sequence

ATGAAGTTACCTCAAAACGACGACGGAGGCGACCTTCGCACCGAAATGGAAAAACAAAAACCCTCGAAACGACGACAACATCGTCGTAGAACGCTGGACAACGACTTCGTTAGGCTTCACTCCATCGCCCTTGTACGTTTTAGAGAAACTGAACGCCCCCTCGGGATCGATTTGCCGATCAAAACTAATATCGCCGCCGCTCGTCATCCCACATCTCCCCGCATCGTCTTCTCTCCGTCGCCTCTCGGTCGCAGACTTTCAGGAATGAGCAGATCACAAGGGCCTTCATCACTCAAAAGAAAAAGGCCAGAACCAGCTCATGGCCATGGAGGAGCTCTCATTGAGCATGAAAAAGTGCTGTATGACCTGATTTGCAGCAAGCAAAGCATGGGGATTTGGATTGGGGACATGAAAAGAGAAACAAAGTATCCTGACAATGTGGTAACTAAATCACTCAAGGCCCTTCAAGGCAGAGGCCTGATTAAACTAGTTGAACACTATCAAAACAAAGGGAAGAAATTCTACCTGTCAAAAGATTTCGAACCATCGAAAGAACTGACCGGCGGTAATTGGTACAGCGATGGAAAGCTCGACAGAGAATACATCAGTACTCTTAAAGGGTTCTGTGCTAGAATGATACAGAAGATGAAGGTGGCTACAATTGAAGGGATCGTGGACTCATTCAAGAAGAGCGGAGCGTCCAAAGTGGACTTGTCTAGGGAGCAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATGAAGTGATGGAGGTGAAGAGCACTGGCGCAGGGGAGTTTGATTTTATTCCTGTTGGGAAGATTTGTTATAAGAGCTATGCTAAAGGAGTTAAAGGGGAGCCCAAAACAGGGGCTATGGCTTCTACTCCTTGTGGAGTCTGTCCAAGGATTAATCATTGCACCCCAAATGGCATCATTTCGCCTAGGACTTGTGTGTATTACACCAAGTGGTTAGAATTTTAG

Coding sequence (CDS)

ATGAAGTTACCTCAAAACGACGACGGAGGCGACCTTCGCACCGAAATGGAAAAACAAAAACCCTCGAAACGACGACAACATCGTCGTAGAACGCTGGACAACGACTTCGTTAGGCTTCACTCCATCGCCCTTGTACGTTTTAGAGAAACTGAACGCCCCCTCGGGATCGATTTGCCGATCAAAACTAATATCGCCGCCGCTCGTCATCCCACATCTCCCCGCATCGTCTTCTCTCCGTCGCCTCTCGGTCGCAGACTTTCAGGAATGAGCAGATCACAAGGGCCTTCATCACTCAAAAGAAAAAGGCCAGAACCAGCTCATGGCCATGGAGGAGCTCTCATTGAGCATGAAAAAGTGCTGTATGACCTGATTTGCAGCAAGCAAAGCATGGGGATTTGGATTGGGGACATGAAAAGAGAAACAAAGTATCCTGACAATGTGGTAACTAAATCACTCAAGGCCCTTCAAGGCAGAGGCCTGATTAAACTAGTTGAACACTATCAAAACAAAGGGAAGAAATTCTACCTGTCAAAAGATTTCGAACCATCGAAAGAACTGACCGGCGGTAATTGGTACAGCGATGGAAAGCTCGACAGAGAATACATCAGTACTCTTAAAGGGTTCTGTGCTAGAATGATACAGAAGATGAAGGTGGCTACAATTGAAGGGATCGTGGACTCATTCAAGAAGAGCGGAGCGTCCAAAGTGGACTTGTCTAGGGAGCAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATGAAGTGATGGAGGTGAAGAGCACTGGCGCAGGGGAGTTTGATTTTATTCCTGTTGGGAAGATTTGTTATAAGAGCTATGCTAAAGGAGTTAAAGGGGAGCCCAAAACAGGGGCTATGGCTTCTACTCCTTGTGGAGTCTGTCCAAGGATTAATCATTGCACCCCAAATGGCATCATTTCGCCTAGGACTTGTGTGTATTACACCAAGTGGTTAGAATTTTAG

Protein sequence

MKLPQNDDGGDLRTEMEKQKPSKRRQHRRRTLDNDFVRLHSIALVRFRETERPLGIDLPIKTNIAAARHPTSPRIVFSPSPLGRRLSGMSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFDFIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF

Homology

[Close]

BLAST of Csor.00g132550 vs. ExPASy Swiss-Prot
Match: Q86JM3 (DNA-directed RNA polymerase III subunit rpc6 OS=Dictyostelium discoideum OX=44689 GN=polr3f PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.1e-27
Identity = 75/244 (30.74%), Postives = 120/244 (49.18%), Query Frame = 0


Query: 85  RLSGMSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYP 144
           RL  +  S   +S K   PE      G  +E + ++Y LI +  + G W  ++K  + Y 
Sbjct: 48  RLMLIQNSDETTSYKEVNPEDQAKFRGLGVE-DFLIYQLIEASSNTGAWTRELKNSSGYQ 107

Query: 145 DNVVTKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYIST 204
              +TK LK L+ R LIK V+  Q+  KK Y+  + EPS+E+TGG  YSD   D +YI  
Sbjct: 108 QVQITKILKTLESRKLIKSVKSIQSGRKKVYMLYNMEPSREITGGQLYSDQSYDHQYIQI 167

Query: 205 LKGFCARMIQKMKVATIEGIVDSFKK--SGASKVDLSREQIEEIVNALVLDNEVMEVKST 264
           +K      +       +  I+   +K    A+   L  E I+ +VN ++ D ++ E++ T
Sbjct: 168 MKMHIKTFVDNKGAVDLADIITYLRKVAEEATSQSLGPEDIQALVNTVIYDGDIEEMRDT 227

Query: 265 GAGEFDFIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYT 324
             G      +G+     Y K  K         + PCG CP  + C+ NG++SP+ CVY+ 
Sbjct: 228 RMGAM----LGRRSGILY-KPTKTPIPVNNFCNMPCGNCPVFDICSDNGLVSPKRCVYFK 285

Query: 325 KWLE 327
           ++LE
Sbjct: 288 QYLE 285

[Close]

BLAST of Csor.00g132550 vs. ExPASy Swiss-Prot
Match: Q2T9S3 (DNA-directed RNA polymerase III subunit RPC6 OS=Bos taurus OX=9913 GN=POLR3F PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.4e-26
Identity = 73/229 (31.88%), Postives = 112/229 (48.91%), Query Frame = 0


Query: 117 EKVLYDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYL 176
           EK++Y +I    + GIW  D++ ++  P   + K LK L+ + LIK V+      KK Y+
Sbjct: 92  EKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYM 151

Query: 177 SKDFEPSKELTGGNWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVD-------SFK 236
             + +P + +TGG WYSD   + E++  L   C + +Q       E   +       SF 
Sbjct: 152 LYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQNKAETARESKQNPMIQRNSSFA 211

Query: 237 KS----------GASKVDLSREQIEEIVNALVLDNEV-MEVKSTGAGEFDFIPVGKICYK 296
            S          G SKV+LS E IE I+N L+ D +V M + +   G    +      Y+
Sbjct: 212 SSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYR 271

Query: 297 SYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 328
           + +  +   P TG +   PCG+CP  + C   G ISP  C+Y T+WLEF
Sbjct: 272 AVSPII---PPTG-LVRAPCGLCPVFDDCHEGGEISPSNCIYMTEWLEF 316

[Close]

BLAST of Csor.00g132550 vs. ExPASy Swiss-Prot
Match: Q9H1D9 (DNA-directed RNA polymerase III subunit RPC6 OS=Homo sapiens OX=9606 GN=POLR3F PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.6e-26
Identity = 73/229 (31.88%), Postives = 111/229 (48.47%), Query Frame = 0


Query: 117 EKVLYDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYL 176
           EK++Y +I    + GIW  D++ ++  P   + K LK L+ + LIK V+      KK Y+
Sbjct: 92  EKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYM 151

Query: 177 SKDFEPSKELTGGNWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVD-------SFK 236
             + +P + +TGG WYSD   + E++  L   C + +Q       E   +       SF 
Sbjct: 152 LYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAETARESKQNPMIQRNSSFA 211

Query: 237 KS----------GASKVDLSREQIEEIVNALVLDNEV-MEVKSTGAGEFDFIPVGKICYK 296
            S          G SKV+LS E IE I+N L+ D +V M + +   G    +      Y+
Sbjct: 212 SSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYR 271

Query: 297 SYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 328
           +    +   P TG +   PCG+CP  + C   G ISP  C+Y T+WLEF
Sbjct: 272 AVNPII---PPTG-LVRAPCGLCPVFDDCHEGGEISPSNCIYMTEWLEF 316

[Close]

BLAST of Csor.00g132550 vs. ExPASy Swiss-Prot
Match: Q921X6 (DNA-directed RNA polymerase III subunit RPC6 OS=Mus musculus OX=10090 GN=Polr3f PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-25
Identity = 73/229 (31.88%), Postives = 111/229 (48.47%), Query Frame = 0


Query: 117 EKVLYDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYL 176
           EK++Y +I    + GIW  D++ ++  P   + K LK L+ + LIK V+      KK Y+
Sbjct: 92  EKLVYQIIEDAGNKGIWSRDIRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYM 151

Query: 177 SKDFEPSKELTGGNWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVD-------SFK 236
             + +P + +TGG WYSD   + E++  L   C + +Q       E   +       SF 
Sbjct: 152 LYNLQPDRSVTGGAWYSDQDFESEFVEVLNQQCFKFLQSKAETARESKQNPVIQRNSSFA 211

Query: 237 KS----------GASKVDLSREQIEEIVNALVLDNEV-MEVKSTGAGEFDFIPVGKICYK 296
            S          G SKV+LS E IE I+N L+ D +V M + +   G    +      Y+
Sbjct: 212 SSHEVWKYICELGISKVELSMEDIETILNTLIYDGKVEMTIIAAKEGTVGSVDGHMKLYR 271

Query: 297 SYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 328
           +    +   P TG + + PCG+CP    C   G ISP  C+Y T+WLEF
Sbjct: 272 AVNPIL---PPTGVVRA-PCGLCPVFEDCHEGGEISPSNCIYMTEWLEF 316

[Close]

BLAST of Csor.00g132550 vs. ExPASy Swiss-Prot
Match: Q9VD25 (Probable DNA-directed RNA polymerase III subunit RPC6 OS=Drosophila melanogaster OX=7227 GN=CG5380 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 63/227 (27.75%), Postives = 101/227 (44.49%), Query Frame = 0


Query: 117 EKVLYDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYL 176
           EKV+Y ++    + GIWI D++ ++      + K LK L+ + LIK V+      KK Y+
Sbjct: 80  EKVVYGIVEEGGNKGIWIRDIRMKSNLNMIQLNKILKNLETKKLIKAVKSVNASKKKVYM 139

Query: 177 SKDFEPSKELTGGNWYSDGKLDREYISTLKGFCARMIQ-----------------KMKVA 236
             + EP   +TGG WY D   + E++  L   C R +Q                 +M   
Sbjct: 140 LYNLEPDLSITGGAWYQDQDFEVEFVDVLNQQCLRFLQMKRDSAEKKREGPLAFKQMSCC 199

Query: 237 TIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFDFIPVGKICYKS 296
           T+  +       G SKV+L+   +E I+  +V D     V+            G   Y++
Sbjct: 200 TVNEVQKFISDLGISKVNLAEADLETILKTVVYDGNAERVRQQD---------GSFVYRA 259

Query: 297 YAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLE 327
               +   P TG +   PCG+CP I +C+  G ++  TC Y   WL+
Sbjct: 260 VNAPL---PPTG-LVQMPCGICPVIKNCSNCGDVTAITCEYMRDWLD 293

[Close]

BLAST of Csor.00g132550 vs. NCBI nr
Match: KAG6604735.1 (DNA-directed RNA polymerase III subunit rpc6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 661 bits (1706), Expect = 1.02e-239
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0


Query: 1   MKLPQNDDGGDLRTEMEKQKPSKRRQHRRRTLDNDFVRLHSIALVRFRETERPLGIDLPI 60
           MKLPQNDDGGDLRTEMEKQKPSKRRQHRRRTLDNDFVRLHSIALVRFRETERPLGIDLPI
Sbjct: 1   MKLPQNDDGGDLRTEMEKQKPSKRRQHRRRTLDNDFVRLHSIALVRFRETERPLGIDLPI 60

Query: 61  KTNIAAARHPTSPRIVFSPSPLGRRLSGMSRSQGPSSLKRKRPEPAHGHGGALIEHEKVL 120
           KTNIAAARHPTSPRIVFSPSPLGRRLSGMSRSQGPSSLKRKRPEPAHGHGGALIEHEKVL
Sbjct: 61  KTNIAAARHPTSPRIVFSPSPLGRRLSGMSRSQGPSSLKRKRPEPAHGHGGALIEHEKVL 120

Query: 121 YDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYLSKDF 180
           YDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYLSKDF
Sbjct: 121 YDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYLSKDF 180

Query: 181 EPSKELTGGNWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVDSFKKSGASKVDLSR 240
           EPSKELTGGNWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVDSFKKSGASKVDLSR
Sbjct: 181 EPSKELTGGNWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVDSFKKSGASKVDLSR 240

Query: 241 EQIEEIVNALVLDNEVMEVKSTGAGEFDFIPVGKICYKSYAKGVKGEPKTGAMASTPCGV 300
           EQIEEIVNALVLDNEVMEVKSTGAGEFDFIPVGKICYKSYAKGVKGEPKTGAMASTPCGV
Sbjct: 241 EQIEEIVNALVLDNEVMEVKSTGAGEFDFIPVGKICYKSYAKGVKGEPKTGAMASTPCGV 300

Query: 301 CPRINHCTPNGIISPRTCVYYTKWLEF 327
           CPRINHCTPNGIISPRTCVYYTKWLEF
Sbjct: 301 CPRINHCTPNGIISPRTCVYYTKWLEF 327

[Close]

BLAST of Csor.00g132550 vs. NCBI nr
Match: XP_022946967.1 (DNA-directed RNA polymerase III subunit rpc6 [Cucurbita moschata] >XP_023532566.1 DNA-directed RNA polymerase III subunit rpc6 [Cucurbita pepo subsp. pepo] >KAG7034865.1 DNA-directed RNA polymerase III subunit rpc6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 492 bits (1267), Expect = 3.16e-174
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 89  MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 148
           MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV
Sbjct: 1   MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 60

Query: 149 TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 208
           TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF
Sbjct: 61  TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 120

Query: 209 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 268
           CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD
Sbjct: 121 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 180

Query: 269 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 327
           FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF
Sbjct: 181 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 239

[Close]

BLAST of Csor.00g132550 vs. NCBI nr
Match: XP_022970903.1 (DNA-directed RNA polymerase III subunit rpc6 [Cucurbita maxima])

HSP 1 Score: 489 bits (1258), Expect = 7.43e-173
Identity = 237/239 (99.16%), Postives = 238/239 (99.58%), Query Frame = 0


Query: 89  MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 148
           MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV
Sbjct: 1   MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 60

Query: 149 TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 208
           TKSLKALQ RGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF
Sbjct: 61  TKSLKALQARGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 120

Query: 209 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 268
           CARMIQKMKVATIEGIVD+FKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD
Sbjct: 121 CARMIQKMKVATIEGIVDAFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 180

Query: 269 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 327
           FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF
Sbjct: 181 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 239

[Close]

BLAST of Csor.00g132550 vs. NCBI nr
Match: XP_022149571.1 (DNA-directed RNA polymerase III subunit rpc6 isoform X1 [Momordica charantia] >XP_022149572.1 DNA-directed RNA polymerase III subunit rpc6 isoform X1 [Momordica charantia])

HSP 1 Score: 442 bits (1138), Expect = 1.35e-154
Identity = 215/240 (89.58%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 89  MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 148
           MSRSQGPSSLKRKRP+ + G  GALIEHEKVLYDLICSKQSMGIWIGD+KRETKY D++V
Sbjct: 1   MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIV 60

Query: 149 TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 208
           TKSLKALQ +G+IKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYS+GKLDREYI+TLKGF
Sbjct: 61  TKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGF 120

Query: 209 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 268
           C RMIQKMKVATIEGIVDSFKKSGASKVDLSREQI+EIVNALVLDNEVMEVKSTG+GEFD
Sbjct: 121 CGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFD 180

Query: 269 FIPVGKICYKSYAKG-VKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 327
           FIP+GKICYK YAKG VKGEPKTGAMAS PCGVCPRI+HCTPNG+ISPRTCVYYTKWL+F
Sbjct: 181 FIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF 238

[Close]

BLAST of Csor.00g132550 vs. NCBI nr
Match: XP_038900531.1 (LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC6-like [Benincasa hispida])

HSP 1 Score: 407 bits (1047), Expect = 1.24e-140
Identity = 200/238 (84.03%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 89  MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 148
           MS+ QGPSSLKRKR + AHG GGALIEHEKVL+DLICSKQ+MGIWIGD+++ETKY D VV
Sbjct: 1   MSKPQGPSSLKRKRLDSAHGFGGALIEHEKVLHDLICSKQNMGIWIGDIRKETKYADGVV 60

Query: 149 TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 208
            K LK+LQ RGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLD+EYI+TLKGF
Sbjct: 61  RKLLKSLQARGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDQEYINTLKGF 120

Query: 209 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 268
           CARMIQK+KV+TIEG V SFKKSG SKVDLSREQIEEIVNALVLDNEVMEVK TG+ EFD
Sbjct: 121 CARMIQKLKVSTIEGTVXSFKKSGTSKVDLSREQIEEIVNALVLDNEVMEVKRTGSREFD 180

Query: 269 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTK-WL 325
           FIPV KICYK YAK VKGEPKTGAMAS PCGVCPRI+HCT +GIIS RTC+YYTK W+
Sbjct: 181 FIPVRKICYKCYAKDVKGEPKTGAMASIPCGVCPRISHCTLDGIISHRTCMYYTKCWI 238

[Close]

BLAST of Csor.00g132550 vs. ExPASy TrEMBL
Match: A0A6J1G553 (DNA-directed RNA polymerase III subunit rpc6 OS=Cucurbita moschata OX=3662 GN=LOC111450988 PE=3 SV=1)

HSP 1 Score: 492 bits (1267), Expect = 1.53e-174
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 89  MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 148
           MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV
Sbjct: 1   MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 60

Query: 149 TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 208
           TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF
Sbjct: 61  TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 120

Query: 209 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 268
           CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD
Sbjct: 121 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 180

Query: 269 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 327
           FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF
Sbjct: 181 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 239

[Close]

BLAST of Csor.00g132550 vs. ExPASy TrEMBL
Match: A0A6J1I599 (DNA-directed RNA polymerase III subunit rpc6 OS=Cucurbita maxima OX=3661 GN=LOC111469737 PE=3 SV=1)

HSP 1 Score: 489 bits (1258), Expect = 3.60e-173
Identity = 237/239 (99.16%), Postives = 238/239 (99.58%), Query Frame = 0


Query: 89  MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 148
           MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV
Sbjct: 1   MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 60

Query: 149 TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 208
           TKSLKALQ RGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF
Sbjct: 61  TKSLKALQARGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 120

Query: 209 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 268
           CARMIQKMKVATIEGIVD+FKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD
Sbjct: 121 CARMIQKMKVATIEGIVDAFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 180

Query: 269 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 327
           FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF
Sbjct: 181 FIPVGKICYKSYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 239

[Close]

BLAST of Csor.00g132550 vs. ExPASy TrEMBL
Match: A0A6J1D8D1 (DNA-directed RNA polymerase III subunit rpc6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017972 PE=3 SV=1)

HSP 1 Score: 442 bits (1138), Expect = 6.55e-155
Identity = 215/240 (89.58%), Postives = 230/240 (95.83%), Query Frame = 0


Query: 89  MSRSQGPSSLKRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVV 148
           MSRSQGPSSLKRKRP+ + G  GALIEHEKVLYDLICSKQSMGIWIGD+KRETKY D++V
Sbjct: 1   MSRSQGPSSLKRKRPDSSSG--GALIEHEKVLYDLICSKQSMGIWIGDIKRETKYADSIV 60

Query: 149 TKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGF 208
           TKSLKALQ +G+IKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYS+GKLDREYI+TLKGF
Sbjct: 61  TKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSEGKLDREYINTLKGF 120

Query: 209 CARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFD 268
           C RMIQKMKVATIEGIVDSFKKSGASKVDLSREQI+EIVNALVLDNEVMEVKSTG+GEFD
Sbjct: 121 CGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNALVLDNEVMEVKSTGSGEFD 180

Query: 269 FIPVGKICYKSYAKG-VKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 327
           FIP+GKICYK YAKG VKGEPKTGAMAS PCGVCPRI+HCTPNG+ISPRTCVYYTKWL+F
Sbjct: 181 FIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCTPNGVISPRTCVYYTKWLDF 238

[Close]

BLAST of Csor.00g132550 vs. ExPASy TrEMBL
Match: A0A6J1D758 (DNA-directed RNA polymerase III subunit rpc6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017972 PE=3 SV=1)

HSP 1 Score: 379 bits (973), Expect = 2.10e-130
Identity = 180/199 (90.45%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 130 MGIWIGDMKRETKYPDNVVTKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGG 189
           MGIWIGD+KRETKY D++VTKSLKALQ +G+IKLVEHYQNKGKKFYLSKDFEPSKELTGG
Sbjct: 1   MGIWIGDIKRETKYADSIVTKSLKALQAKGMIKLVEHYQNKGKKFYLSKDFEPSKELTGG 60

Query: 190 NWYSDGKLDREYISTLKGFCARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNA 249
           NWYS+GKLDREYI+TLKGFC RMIQKMKVATIEGIVDSFKKSGASKVDLSREQI+EIVNA
Sbjct: 61  NWYSEGKLDREYINTLKGFCGRMIQKMKVATIEGIVDSFKKSGASKVDLSREQIQEIVNA 120

Query: 250 LVLDNEVMEVKSTGAGEFDFIPVGKICYKSYAKG-VKGEPKTGAMASTPCGVCPRINHCT 309
           LVLDNEVMEVKSTG+GEFDFIP+GKICYK YAKG VKGEPKTGAMAS PCGVCPRI+HCT
Sbjct: 121 LVLDNEVMEVKSTGSGEFDFIPIGKICYKCYAKGGVKGEPKTGAMASIPCGVCPRISHCT 180

Query: 310 PNGIISPRTCVYYTKWLEF 327
           PNG+ISPRTCVYYTKWL+F
Sbjct: 181 PNGVISPRTCVYYTKWLDF 199

[Close]

BLAST of Csor.00g132550 vs. ExPASy TrEMBL
Match: A0A5D3D7H7 (DNA-directed RNA polymerase III subunit rpc6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00330 PE=3 SV=1)

HSP 1 Score: 379 bits (972), Expect = 1.64e-129
Identity = 186/244 (76.23%), Postives = 214/244 (87.70%), Query Frame = 0


Query: 88  GMSRSQGPSSLKRKRPE--PAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPD 147
           GMS+SQGPSSLKRKRP+    +  GGALI  EKVLYDLICSKQSMGI   DMKRETK+ +
Sbjct: 4   GMSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAE 63

Query: 148 NVVTKSLKALQGRGLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTL 207
           +VVTKSLK+LQ +GLIK+V+HYQNKGKKFYLS DFEP+KELTGGNWY DG+LD++YI+TL
Sbjct: 64  SVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTL 123

Query: 208 KGFCARMIQKMKVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAG 267
           K  CARMIQ+ K+ TIEGIV+SFK+SGA KV+LSREQIEEIVNALVLDN+VMEVKS+G G
Sbjct: 124 KQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFG 183

Query: 268 EFDFIPVGKICYK--SYAKGVKGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTK 327
           EF+FIP+GKICYK  +   G+KGEPK GAMAS PCGVCPRI +CTPNGIISP TCVYYTK
Sbjct: 184 EFEFIPIGKICYKYCTQGGGLKGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTK 243

[Close]

BLAST of Csor.00g132550 vs. TAIR 10
Match: AT5G23710.1 (DNA binding;DNA-directed RNA polymerases )

HSP 1 Score: 201.8 bits (512), Expect = 8.3e-52
Identity = 105/232 (45.26%), Postives = 142/232 (61.21%), Query Frame = 0


Query: 99  KRKRPEPAHGHGGALIEHEKVLYDLICSKQSMGIWIGDMKRETKYPDNVVTKSLKALQGR 158
           KRKRP+P    G     HEK L DLI   Q  G  + ++KRE   P  +VT+ + +L+ +
Sbjct: 3   KRKRPDPKSSGGDLNEPHEKKLLDLIRINQGRGATMFELKREKTIPATIVTRLIASLRKK 62

Query: 159 GLIKLVEHYQNKGKKFYLSKDFEPSKELTGGNWYSDGKLDREYISTLKGFCARMIQ--KM 218
            LIK V +  NKG K YL+ +FEP  ELTGG WY+DG LD   I  LK  C  +++  + 
Sbjct: 63  NLIKEVANMNNKGVKHYLAMEFEPCSELTGGEWYTDGALDLSKIEDLKAKCVMILERHRQ 122

Query: 219 KVATIEGIVDSFKKSGASKVDLSREQIEEIVNALVLDNEVMEVKSTGAGEFDFIPVGKIC 278
           +V T+E +   F K    +  LS +Q +EI+  L+LDN +MEVKS G  EF    +G++C
Sbjct: 123 RVVTLEVLCGYFVK----EEKLSVDQTKEILKNLILDNLIMEVKSNGMNEFASTRIGEVC 182

Query: 279 YKSYAKGV-KGEPKTGAMASTPCGVCPRINHCTPNGIISPRTCVYYTKWLEF 328
           Y+   K    GEP+ GA AS PCGVCP I  C+P+G+ISP TCVY+ KWL+F
Sbjct: 183 YRLTGKKFGNGEPRAGAFASIPCGVCPHIAICSPDGVISPTTCVYFQKWLDF 230

The following BLAST results are available for this feature:

BLAST of Csor.00g132550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q86JM3	3.1e-27	30.74	DNA-directed RNA polymerase III subunit rpc6 OS=Dictyostelium discoideum OX=4468...	[more]
Q2T9S3	3.4e-26	31.88	DNA-directed RNA polymerase III subunit RPC6 OS=Bos taurus OX=9913 GN=POLR3F PE=...	[more]
Q9H1D9	7.6e-26	31.88	DNA-directed RNA polymerase III subunit RPC6 OS=Homo sapiens OX=9606 GN=POLR3F P...	[more]
Q921X6	1.7e-25	31.88	DNA-directed RNA polymerase III subunit RPC6 OS=Mus musculus OX=10090 GN=Polr3f ...	[more]
Q9VD25	1.3e-20	27.75	Probable DNA-directed RNA polymerase III subunit RPC6 OS=Drosophila melanogaster...	[more]

BLAST of Csor.00g132550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604735.1	1.02e-239	100.00	DNA-directed RNA polymerase III subunit rpc6, partial [Cucurbita argyrosperma su...	[more]
XP_022946967.1	3.16e-174	100.00	DNA-directed RNA polymerase III subunit rpc6 [Cucurbita moschata] >XP_023532566....	[more]
XP_022970903.1	7.43e-173	99.16	DNA-directed RNA polymerase III subunit rpc6 [Cucurbita maxima]	[more]
XP_022149571.1	1.35e-154	89.58	DNA-directed RNA polymerase III subunit rpc6 isoform X1 [Momordica charantia] >X...	[more]
XP_038900531.1	1.24e-140	84.03	LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC6-like [Benincas...	[more]

BLAST of Csor.00g132550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G553	1.53e-174	100.00	DNA-directed RNA polymerase III subunit rpc6 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I599	3.60e-173	99.16	DNA-directed RNA polymerase III subunit rpc6 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1D8D1	6.55e-155	89.58	DNA-directed RNA polymerase III subunit rpc6 isoform X1 OS=Momordica charantia O...	[more]
A0A6J1D758	2.10e-130	90.45	DNA-directed RNA polymerase III subunit rpc6 isoform X2 OS=Momordica charantia O...	[more]
A0A5D3D7H7	1.64e-129	76.23	DNA-directed RNA polymerase III subunit rpc6-like OS=Cucumis melo var. makuwa OX...	[more]

BLAST of Csor.00g132550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23710.1	8.3e-52	45.26	DNA binding;DNA-directed RNA polymerases	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007832	RNA polymerase Rpc34	PFAM	PF05158	RNA_pol_Rpc34	coord: 114..215 e-value: 2.5E-24 score: 86.3 coord: 216..326 e-value: 2.1E-15 score: 56.9
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 115..178 e-value: 2.2E-15 score: 58.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
IPR016049	RNA polymerase Rpc34-like	PANTHER	PTHR12780	RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED	coord: 92..326
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 115..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g132550.m01	Csor.00g132550.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006383	transcription by RNA polymerase III
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0008168	methyltransferase activity