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Csor.00g131830 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACCCACAAAGGCTTCAATTCTGGTCGTCGCTGTTCTTCTCATTGTCATCCTTCAAGTTCCCACAGCCATGCCCGCCAGACACCTCCCGCCTCGTAAGAATCTAGCTCAAACCCAATACAAAGATCACATTTTTAAACAAACCCAGATGATAAAAGTAGATTTATTTGGTGCCCATTATTGAAAAAAGTGTCAATTTTTTGGCTATGCAGATAATAGTCCAAAGCGAGTGAGGGGCGAGACGGTGGAAGTTGCAGGGTCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCGCGCCATGCAGGCTTGTGATGGTTAGATACTTTTGTTCTTCGGTTGAAGACTCGGAGACTTGTCCCTTGGCTTACAAGTGCATGTGCAGCCACAAGTCCTTCCCTGTTCCTTGATTGGATCAGATTTCTAGCTATCTTTGGGGTGTGTGTATCATATATTAATAATGCCTTTTCTCTCATATAGCTTTATTTTAGGATCGGTCTTGGGTTTTCGTTTTTAGAATCAAGGCGTTCTTGTTATTATCAGCCATCTTGTAAGGGTTTTTTTTAGTACTAGAAATGCATATGCATGTGTTGTTGGTTACATATGTAACATCAATTTATCTTTACATATAAGTGTTATCACCTACAACTTTAAACATATGTGGTACATCAATTACTATCCACTTTGATAATGTTGAATTTGTGACACCCGAATAAAGGAATGGTCGTTCATCTTCCTTTTCGATGACCCATGTTGGTTTCTACACAGCTCAAACCCACCGTTAACAGATATTGTCACGCGTCTACTAGGGAGTGGTTTATAAGAAATTATTTGTTTTCCTCTCCGACTAATCCACCCCTTGAGGGCTTAGCGTCCTAGGGGGACGTGTCTACTAGGGAGACCCTTATAAGAAATGATTCGTTCTCCTTCCCCTTGAGGGCTTAGCGTCCTTGAGGATGCATCTACTAGGGAGAGGTTTCTACACTCTTGTAAGGAATGATTCGTTCTCTTCTCCAATCAATCCACCTCCTTGGAGGGTGAGAGTCCTCGCTGGCTCCAATCGAGGTAGGATCTCACAATCCACTCCCTTTGGGGGGCCAACATCCTCGTTAGCACACCACTCAATGTCTAGCTCTGGTACCATTTGTAACAACTCAAACCCACTTTTACACAGGTATTGTACACCTTAGCCTATTATGTATCGCCGTCAACCTCATAGTTTTAAAACGTGTATACTCGGGAGGAATTTCTACACTTTTATAAGGAATGATTCGTTTCTCTCTCCAACCGATGTGGGATCTCACAATATCACGAAAAAATGATAGGGTCATCAAATGTATTCCAAATTCTTATCTAAATCTTAGCCTACATAACATAATTTTTAAGGTAAGGTTGTTTATTAAGAGTAAAAACTAAAAAGAAAGTAAAGGAATGAACTTGAAACTTATCCTAAAATATAAGAGTGATCTCATCACAAAATATTGAGATTCATAATTAATAAGCCAATATGAACATTGTTATAGTTTAAGCAATGACCCAATTTTTTATGTATGCAACGTAACAAATAAGAGAATGAATTACCAATAATAATTCATACACATAATCTTCCAAAGGAGGGGGCGGCGAGAGACACGAAGAAGAAGAACAACCCCGAGTGCTACGGAATAGGCAATTTGATAGGAGCTTGATTGGTTTCAATGCCTGAGGCAGACAAACACAGATCAAAGCGAAGAAATGTCACTCATTTTCTTCCCCCAAATCCAATCTCCTTCCTCTTCTTCTCTGGTTCCTATTGTTTCCCCTTCAATCCCCTTCTTCCCGTGGTGCCCACCGCCCGAACCCACATACCAGGACGGTCAAGGTTACCACCGCCGCCGCCGCCGCCTCTCTGCACCGCCCATTTGTTCCCTCAGATGCCATAGCGAGTACTGTTCTTTTTCCCCCCCCCATTGCTGTCTTTCTTGCTGCCTTTTGTCGGGTTTTCGTTTGTTTGTCTTGCTTTCTAATTCTAATAATGCTACTCATTGAAGAGACATCTAGTTCTACCTTTTCCCATTTTTTCAATGCTCATGATTTTCCTCTGCTTTTTTACATTATAAACTTATGCCTAAAGGATCCCTTTAATTGCGCTTGTAATCTTTTCATGTTCTTCTCTTTCAAATGTCTCACTCTTCTTAGCTTCTCCTCCTATGTTTATATTTATACATGGGTTTTGCTTTGTTCTTCATTTTGGGAGGAAAATTGGTTTCTTAATGAGATTCAGGAGGAGAAGACAATGCTTTCCATCTTGCTCTTCCCTCCATGAAGTAATCCACCCATCAATTTCTCTGTGTTCACCTCCCTTTATCATTTGTTCGTAGATTGAAACTAAAATTCAATGTATTGATCATTCCCAATTTGCTGGACATGTCGGAGGAACTACTGTTTGAAGATCCGATGATTGTGTTCTTGTTTTTTGACAGTCTTAGGCACTGATGTTTTTATGACAGTTAATTGTGGAAAATTATTGTAGGTTGATGAAGATGAAATATATTGGAGACAGAGAAGGGGTGACGAAGAGTTAGAATGGTCACATCGTTCCACCCCTGTAATTTTACAGCTAGCTCAATGTTTTAGTGAGTATAGAGCAGTGTTTGAATGTTTTTTTTTTTTTTTTAATGTTTTTGAGATGAAGTTGTAGAATTATGATTTTGTGGAATTCACACGTGGTTTTATATGCTCGCCATGTCTCAGTGTCACCCTGTTGTTTACAAATTAGCTTGTGGTAAATGTAGCTAATGCTATGGTTGGACCACGAACATGGATTGGAGGACTTTTCAATCGCGCAGGCAACAGAAAGAATGATAAGTTTGTTCAGTACCCGTTGAGTCCTCTTCAGGTAAAAATAGTGTTGGAAGGTCTATGGGTATTGTAATTGACTTGATGTTGTGTTATTTATCATTTTTTGTGTGTTGTGACTATTCTACATCACTCGTAGAATGGGCTAAACGTTGGTTTGTTAGTGTGAGGGAAGCTTTACCTCTTGAGTAGCTTTTGTCTTGGAAAGGCCATTGGTTTGTAATAGATCCTTGTGTTCCTGCCAACATGAGCATAGGTGAGTGATGAGAGCATCTTTACTCCCTCTAAGAGGTTATAGGTTTGAATCCCAACCCCCCCATGTGTTGATGCAATGTTCTTAAAAAGAGAAAAGAAAAAAAAGAACAATAGATCTTTGTGTTCCCGAGAATGTCCGCTCATGTGCACCGCTAGTAGATATTGAACTCTTTGGGCTTTCCCTTTCGGGTATCCCCTTAAGGTTTTTAAAACGTGTATGCTAGAGAGAGGTTTGCACACCCTTATAAAGAATGTTTGGTTGTCCTCCCTAATCAACGTGGATCTCACAAAATGGAGATCCCACATGTTTATTAATTTAAAACTTGTGATCCCCTTTTTATTGGATGAGACCTTGTAAAAGCTAAAAGTAAATGCAGTTTTATATAAAACCATTCTTCTAATCGCTTGTTCTAACATGGGATTCATGCAAACAGGAGGAAAGGTTTCAAAGGCTACAAGACCGAATTCCCATACCTTTTGATGAGACACAACTTGAACATCAAGTATTTTTCTTGTTTTAACTTTCAACAGCTGTGAGATGAGTTGTTGTTACTCTTGCTAATAATCGTTCATTGATGACAGGAAGCCCTGAAAGCATTGTGGGATGCTGCCTTTCCAAATATTGAGCTCAAAGGGATGGTATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGACCTAATCCATCCACTGACTTTAGGTACACTCCACACCAACATCTCATATTAGTGTGTTCATATGTTGTATCAATACTTTATTTTTCATATTTAAAGTTAATTTTTTTCTCACAGTGAGCTGATTTCTTAGGGGTTGCGGTCTCATTTCGCTCGAAAATTTGCTGTTTTTCTCCAGGACGTTTCCGGTATGTCGTATCCTGCTGTTGTTCTGTGTCTCATTTCCCTAAATGCCTGAATTATCACTAATCACATACAAATTCAAAAAATGAAGGCATCTTTTCGTAGGTTGTTATTGAAGGAAGGTGGTAA ATGACACCCACAAAGGCTTCAATTCTGGTCGTCGCTGTTCTTCTCATTGTCATCCTTCAAGTTCCCACAGCCATGCCCGCCAGACACCTCCCGCCTCATAATAGTCCAAAGCGAGTGAGGGGCGAGACGGTGGAAGTTGCAGGGTCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCGCGCCATGCAGGCTTGTGATGGTTGATGAAGATGAAATATATTGGAGACAGAGAAGGGGTGACGAAGAGTTAGAATGGTCACATCGTTCCACCCCTGTAATTTTACAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGAACATGGATTGGAGGACTTTTCAATCGCGCAGGCAACAGAAAGAATGATAAGTTTGTTCAGTACCCGTTGAGTCCTCTTCAGGAGGAAAGGTTTCAAAGGCTACAAGACCGAATTCCCATACCTTTTGATGAGACACAACTTGAACATCAAGAAGCCCTGAAAGCATTGTGGGATGCTGCCTTTCCAAATATTGAGCTCAAAGGGATGGTATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGACCTAATCCATCCACTGACTTTAGGGGTTGCGGTCTCATTTCGCTCGAAAATTTGCTGTTTTTCTCCAGGACGTTTCCGGTTGTTATTGAAGGAAGGTGGTAA ATGACACCCACAAAGGCTTCAATTCTGGTCGTCGCTGTTCTTCTCATTGTCATCCTTCAAGTTCCCACAGCCATGCCCGCCAGACACCTCCCGCCTCATAATAGTCCAAAGCGAGTGAGGGGCGAGACGGTGGAAGTTGCAGGGTCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCGCGCCATGCAGGCTTGTGATGGTTGATGAAGATGAAATATATTGGAGACAGAGAAGGGGTGACGAAGAGTTAGAATGGTCACATCGTTCCACCCCTGTAATTTTACAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGAACATGGATTGGAGGACTTTTCAATCGCGCAGGCAACAGAAAGAATGATAAGTTTGTTCAGTACCCGTTGAGTCCTCTTCAGGAGGAAAGGTTTCAAAGGCTACAAGACCGAATTCCCATACCTTTTGATGAGACACAACTTGAACATCAAGAAGCCCTGAAAGCATTGTGGGATGCTGCCTTTCCAAATATTGAGCTCAAAGGGATGGTATCTGAGCAATGGAAAGAAATGGGTTGGCAAGGACCTAATCCATCCACTGACTTTAGGGGTTGCGGTCTCATTTCGCTCGAAAATTTGCTGTTTTTCTCCAGGACGTTTCCGGTTGTTATTGAAGGAAGGTGGTAA MTPTKASILVVAVLLIVILQVPTAMPARHLPPHNSPKRVRGETVEVAGSRLPDCSHACGSCAPCRLVMVDEDEIYWRQRRGDEELEWSHRSTPVILQLAQCFTNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPLQEERFQRLQDRIPIPFDETQLEHQEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPVVIEGRW Homology
BLAST of Csor.00g131830 vs. ExPASy Swiss-Prot
Match: Q54YW1 (ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy Swiss-Prot
Match: Q54VR8 (ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13 Identity = 28/70 (40.00%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy Swiss-Prot
Match: Q8IZ81 (ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.1e-13 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy Swiss-Prot
Match: Q08DZ3 (ELMO domain-containing protein 2 OS=Bos taurus OX=9913 GN=ELMOD2 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy Swiss-Prot
Match: Q3V1U8 (ELMO domain-containing protein 1 OS=Mus musculus OX=10090 GN=Elmod1 PE=1 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 7.3e-12 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Csor.00g131830 vs. NCBI nr
Match: KAG6604806.1 (ELMO domain-containing protein A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 468 bits (1204), Expect = 1.19e-166 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Csor.00g131830 vs. NCBI nr
Match: XP_022947762.1 (ELMO domain-containing protein A isoform X1 [Cucurbita moschata]) HSP 1 Score: 322 bits (824), Expect = 1.34e-107 Identity = 154/168 (91.67%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Csor.00g131830 vs. NCBI nr
Match: XP_023534283.1 (ELMO domain-containing protein A isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 317 bits (813), Expect = 1.27e-105 Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Csor.00g131830 vs. NCBI nr
Match: KAG7034926.1 (xanthohumol 4'-O-methyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 317 bits (813), Expect = 1.40e-101 Identity = 148/151 (98.01%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of Csor.00g131830 vs. NCBI nr
Match: XP_022970747.1 (ELMO domain-containing protein A [Cucurbita maxima]) HSP 1 Score: 297 bits (760), Expect = 1.27e-97 Identity = 144/168 (85.71%), Postives = 148/168 (88.10%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy TrEMBL
Match: A0A6J1G7C3 (ELMO domain-containing protein A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451525 PE=4 SV=1) HSP 1 Score: 322 bits (824), Expect = 6.49e-108 Identity = 154/168 (91.67%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy TrEMBL
Match: A0A6J1I002 (ELMO domain-containing protein A OS=Cucurbita maxima OX=3661 GN=LOC111469645 PE=4 SV=1) HSP 1 Score: 297 bits (760), Expect = 6.16e-98 Identity = 144/168 (85.71%), Postives = 148/168 (88.10%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy TrEMBL
Match: A0A6J1FSU1 (uncharacterized protein LOC111448148 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448148 PE=4 SV=1) HSP 1 Score: 291 bits (745), Expect = 1.14e-96 Identity = 136/175 (77.71%), Postives = 152/175 (86.86%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy TrEMBL
Match: A0A6J1JGA3 (uncharacterized protein LOC111484122 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484122 PE=4 SV=1) HSP 1 Score: 289 bits (739), Expect = 8.99e-96 Identity = 136/175 (77.71%), Postives = 151/175 (86.29%), Query Frame = 0
BLAST of Csor.00g131830 vs. ExPASy TrEMBL
Match: A0A6A6K330 (ELMO domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_043542 PE=4 SV=1) HSP 1 Score: 288 bits (738), Expect = 8.77e-95 Identity = 124/182 (68.13%), Postives = 155/182 (85.16%), Query Frame = 0
BLAST of Csor.00g131830 vs. TAIR 10
Match: AT1G03620.1 (ELMO/CED-12 family protein ) HSP 1 Score: 188.3 bits (477), Expect = 6.5e-48 Identity = 87/144 (60.42%), Postives = 112/144 (77.78%), Query Frame = 0
BLAST of Csor.00g131830 vs. TAIR 10
Match: AT3G03610.1 (ELMO/CED-12 family protein ) HSP 1 Score: 132.5 bits (332), Expect = 4.2e-31 Identity = 65/150 (43.33%), Postives = 93/150 (62.00%), Query Frame = 0
BLAST of Csor.00g131830 vs. TAIR 10
Match: AT3G60260.3 (ELMO/CED-12 family protein ) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29 Identity = 62/122 (50.82%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of Csor.00g131830 vs. TAIR 10
Match: AT3G60260.1 (ELMO/CED-12 family protein ) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29 Identity = 62/119 (52.10%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of Csor.00g131830 vs. TAIR 10
Match: AT3G60260.2 (ELMO/CED-12 family protein ) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29 Identity = 62/119 (52.10%), Postives = 76/119 (63.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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