Csor.00g131700 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g131700
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 650217 .. 651898 (+)
RNA-Seq ExpressionCsor.00g131700
SyntenyCsor.00g131700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACATGGGCCATATCGTTTTTATGGGCCACGGCCCAATTAAACATTGGAGACACCCAGAAGCAAGAAGCCGCCAGCTTTTCTAGGGTTTTAGTCTATATAAACCACGCAAGGTATCTCTATTCCTTCATCCAGGGTGCGTTCAGGGCGAGGTTGATCTAGGGTTCGTCGGCTGAGCGGGCGATCTCCTTTAGCATTAAGGTTTAGCGCTTCTCGAAAATTTTTACTTTCTTAAATAACATTTGCACGACGCACCCCGGGCTACTCTGATTATCTTCATGACGGTGATAGCCCCATTGCTCGTGCTAGAGTGCTGCCGTTTAGTGTTGCAGGTTAGCCTTGCCTCCACGGCTTATTTGTGTCAAAATAACGGCAAGATTCCTTTATCATGGATATAGAGCCATCTTAAAATCTTGAATTTGTTTTTGTTTAATTTATTGGATTATTGGGGGCCTCACTACACCTTTAGCTTGTTTTCTGCAGATAAAGCATATGAAAATGAAGCTAGTCATAGAGGCCGAGATCTAATCTTCGGCGGTGTTCACGTGGGGGCCTATCTTTTCAATGTTTGTGCCTCTAAAAACTTCCGCTATATACCTTTTTATCCCAATTTGAATCGATTTTTCTGGTTTGTTGTTTTGTTTTCTTGTTTAAAAGTTTCGTTTTAAGGGTGATAGATAAGAGTTGTTGGCTATGATTACACATTATCCGCGCTTCCGAGGTTATACGATGAAGCAAACTTAAAAACAAATGGTTGAATTTCTTAATATGAGCCACATTTCTTCTATCATTAATTTATATAATTTTCGCTAATTTAGTTGTTGCTTTCAAATCTGGCCGTGATGATTGAACTTCAGCTTATATGCCAGTTCTGCTTCAGAATTTGATGATTGATAAAGCTGTTACATATTATCTGAGCCTTAAATCTGCATATCAATTTTTCCAATGATGATATAATCCGTTTGTTTGAGACATTGTGGATCCAAGACCCTGTTTCAGGGAGAACCTACTTGGTGAAGCCTTGTTCACATGATATCAATGGATTTAACTGAGGGTTCACCATATTTAGACAATAGTGTAATTTCCATTTTTTTACCCTTTTCGTGTTGAAATCATTTGATACAAGAGTATTTTTTAATTTGTTTTAGCCTTTGATGATACAATCCAACTTTCTGAGATGTTGTGAAGCCAAGACCCTGTTTCAGGGAGAACCTACTTGGTGGAATAACATTTGTATGAGTTATTTGGATTTCGCTGAGGCTCTTTTTAGTCATTTAATTTTAATCTTGATTCAAAATTGTTTATTTTACCATTTTTATTACTTGAATACTCACTTTGTTTAGCATGTTTCCTTGATTTGAGTTTAACTATACACATCCCTTTTATAATGTGGGAATGTAGTCTGAAAAACTCAGAAATTGTGTGTTGTCATCAGCTTCTTCTCGCCGAATTAGGAGGTTGGAGTTAAATAACAGCACTAAATTCACCACACCATTGTAGTAATCGATTTTTCATTTGTTTGTAGTCGTTATTGTCTTTGTTTTGTTTGTTGTTTGTCGTTGTGTTCTTCTGCAGATTTGAGTTCAATGCGTGGTGTCTTAACCTTACAGTTATGGGATGTTGGAAGCCGTGCACTACAGCAATCGCCTGTTGTATCGTATTCGAATTTGTATTTGTAG

mRNA sequence

ATGGATACATGGGCCATATCGTTTTTATGGGCCACGGCCCAATTAAACATTGGAGACACCCAGAAGCAAGAAGCCGCCAGCTTTTCTAGGGTTTTAGTCTATATAAACCACGCAAGCCCCATTGCTCGTGCTAGAGTGCTGCCGTTTAGTGTTGCAGATAAAGCATATGAAAATGAAGCTAGTCATAGAGGCCGAGATCTAATCTTCGGCGGTGTTCACGTGGGGGCCTATCTTTTCAATTTATGGGATGTTGGAAGCCGTGCACTACAGCAATCGCCTGTTGTATCGTATTCGAATTTGTATTTGTAG

Coding sequence (CDS)

ATGGATACATGGGCCATATCGTTTTTATGGGCCACGGCCCAATTAAACATTGGAGACACCCAGAAGCAAGAAGCCGCCAGCTTTTCTAGGGTTTTAGTCTATATAAACCACGCAAGCCCCATTGCTCGTGCTAGAGTGCTGCCGTTTAGTGTTGCAGATAAAGCATATGAAAATGAAGCTAGTCATAGAGGCCGAGATCTAATCTTCGGCGGTGTTCACGTGGGGGCCTATCTTTTCAATTTATGGGATGTTGGAAGCCGTGCACTACAGCAATCGCCTGTTGTATCGTATTCGAATTTGTATTTGTAG

Protein sequence

MDTWAISFLWATAQLNIGDTQKQEAASFSRVLVYINHASPIARARVLPFSVADKAYENEASHRGRDLIFGGVHVGAYLFNLWDVGSRALQQSPVVSYSNLYL
Homology
[Close]
BLAST of Csor.00g131700 vs. NCBI nr
Match: KAG6604819.1 (hypothetical protein SDJN03_02136, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208 bits (529), Expect = 1.04e-67
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MDTWAISFLWATAQLNIGDTQKQEAASFSRVLVYINHASPIARARVLPFSVADKAYENEA 60
           MDTWAISFLWATAQLNIGDTQKQEAASFSRVLVYINHASPIARARVLPFSVADKAYENEA
Sbjct: 1   MDTWAISFLWATAQLNIGDTQKQEAASFSRVLVYINHASPIARARVLPFSVADKAYENEA 60

Query: 61  SHRGRDLIFGGVHVGAYLFNLWDVGSRALQQSPVVSYSNLYL 102
           SHRGRDLIFGGVHVGAYLFNLWDVGSRALQQSPVVSYSNLYL
Sbjct: 61  SHRGRDLIFGGVHVGAYLFNLWDVGSRALQQSPVVSYSNLYL 102

[Close]
BLAST of Csor.00g131700 vs. NCBI nr
Match: XP_022970684.1 (uncharacterized protein LOC111469595 isoform X3 [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 6.70e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNLWDVGSRALQ 90
          ADKAYENEASHRGRDLIFGGVHVGAYLFN   + S  L+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNPLMIQSNFLR 80

[Close]
BLAST of Csor.00g131700 vs. NCBI nr
Match: XP_022947460.1 (uncharacterized protein LOC111451316 [Cucurbita moschata])

HSP 1 Score: 65.1 bits (157), Expect = 1.02e-10
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNLWDVGSRALQ 90
          ADKAYENEASHRGRDLIFGGVHVGAYLFN   + S  L+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNPLMIQSNFLR 80

[Close]
BLAST of Csor.00g131700 vs. NCBI nr
Match: XP_022970683.1 (uncharacterized protein LOC111469595 isoform X2 [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 1.34e-10
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNL 81
          ADKAYENEASHRGRDLIFGGVHVGAYLFN+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNI 71

[Close]
BLAST of Csor.00g131700 vs. NCBI nr
Match: XP_022970682.1 (uncharacterized protein LOC111469595 isoform X1 [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 2.64e-10
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNLWDVGSRALQ 90
          ADKAYENEASHRGRDLIFGGVHVGAYLFN   + S  L+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNPLMIQSNFLR 80

[Close]
BLAST of Csor.00g131700 vs. ExPASy TrEMBL
Match: A0A6J1I6C1 (uncharacterized protein LOC111469595 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469595 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.24e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNLWDVGSRALQ 90
          ADKAYENEASHRGRDLIFGGVHVGAYLFN   + S  L+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNPLMIQSNFLR 80

[Close]
BLAST of Csor.00g131700 vs. ExPASy TrEMBL
Match: A0A6J1G6Y6 (uncharacterized protein LOC111451316 OS=Cucurbita moschata OX=3662 GN=LOC111451316 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.96e-11
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNLWDVGSRALQ 90
          ADKAYENEASHRGRDLIFGGVHVGAYLFN   + S  L+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNPLMIQSNFLR 80

[Close]
BLAST of Csor.00g131700 vs. ExPASy TrEMBL
Match: A0A6J1I4M3 (uncharacterized protein LOC111469595 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469595 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.50e-11
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNL 81
          ADKAYENEASHRGRDLIFGGVHVGAYLFN+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNI 71

[Close]
BLAST of Csor.00g131700 vs. ExPASy TrEMBL
Match: A0A6J1HZT6 (uncharacterized protein LOC111469595 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469595 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.28e-10
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 52 ADKAYENEASHRGRDLIFGGVHVGAYLFNLWDVGSRALQ 90
          ADKAYENEASHRGRDLIFGGVHVGAYLFN   + S  L+
Sbjct: 42 ADKAYENEASHRGRDLIFGGVHVGAYLFNPLMIQSNFLR 80

[Close]
BLAST of Csor.00g131700 vs. ExPASy TrEMBL
Match: A0A6J1CG67 (uncharacterized protein LOC111011226 OS=Momordica charantia OX=3673 GN=LOC111011226 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.55e-06
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 39 SPIARARVLPFSVADKAYENEASHRGRDLIFGGVHVGAYLFNL-WDV 84
          SPIARAR+LPFSVADK  + +     +   FGGVHVGA  FN+ W+V
Sbjct: 51 SPIARARLLPFSVADKRMKMKLVIEAKIYSFGGVHVGACPFNIKWNV 97

The following BLAST results are available for this feature:
BLAST of Csor.00g131700 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g131700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604819.11.04e-67100.00hypothetical protein SDJN03_02136, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022970684.16.70e-1179.49uncharacterized protein LOC111469595 isoform X3 [Cucurbita maxima][more]
XP_022947460.11.02e-1079.49uncharacterized protein LOC111451316 [Cucurbita moschata][more]
XP_022970683.11.34e-1096.67uncharacterized protein LOC111469595 isoform X2 [Cucurbita maxima][more]
XP_022970682.12.64e-1079.49uncharacterized protein LOC111469595 isoform X1 [Cucurbita maxima][more]
BLAST of Csor.00g131700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I6C13.24e-1179.49uncharacterized protein LOC111469595 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1G6Y64.96e-1179.49uncharacterized protein LOC111451316 OS=Cucurbita moschata OX=3662 GN=LOC1114513... [more]
A0A6J1I4M36.50e-1196.67uncharacterized protein LOC111469595 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HZT61.28e-1079.49uncharacterized protein LOC111469595 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1CG677.55e-0657.45uncharacterized protein LOC111011226 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
BLAST of Csor.00g131700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g131700.m01Csor.00g131700.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane