Csor.00g131670 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTCGCTGGTCAGAAATCAGACCTCGATGGCAAGGTTTGGAGCCTTTGTAGTATACCCTTTTGGCAAAACGGCAATGTCTCCTCGTCTTCTGGTTCTTCGTCGACTGCTATTCATCGCGTTAATGAGCAAAGTAATGGTCATAAGCCAACAGAGAACTCGGGCTCCTATCCTTCTGGCAAGGTTTCGTTCATTGCGAAATCTCTACTTCCTACCAGAAGAAGGCTTCGTCTCGATCCTTCCAACAAGCTCTACTTTCCATGTATGTATCCTATTTTCTCATCTGGGTCGCCATTTTTTTGGGTTCATAATGAGATTTTGTTGCCTTTTTCGTTTTGTTCTTACAACTGTGGTCGTCCTCCCCTGTTCTCTGGCTTGATGATTACTAAATCACTCCCTAAAATCGATCTGTTATTGCTTGGGTTTTGAGAATGTTTGTCATTTTTGTTCATCTTTTCAGATTGCTTCCACTTTTTTTGGTCGAACAGCCAAGTTTGTTTAGTTGTCTGATGCCCTTGAATTCCTCTCAGCTTGTGTTTTGTTTTCATTGTCTTTCTCTTAAAGATGAACCTGGGAAGCAGGTAAAGAGTGCTATTGAGATACAGAATACGAGCAAGAATCATGTGGCTTTCAAGGTATGAATCATTTCCCTCACGAACTTTTATCAGTTTTAAGCCTACCCAATGCAGCCTTCTTACTTCTTACCCCCTTGAATTGTTCTAGTTTCAAACGACCGCGCCAAAGAGCTGCTACATGCGTCCTCCTGGCGGTATACTTGCTCCTGGTGAAAGTATCATCGCAACGGGTAAGACATTCATCTTAGTTTTGAGCTGCATTCCTTGAACTGAACATTACAAGTATGAACAGCATTTGGAGTTTTTCTGAGGTTCTTGTATCTGTGACTTTACTTCAGTGTTCAAGTTTGTGGAGCCACTAGAGAACAATGAGAAGCCTGTGGATCAAAAGAGGAGGGTTAAGTTTAAGATTGTGAGCTTGAAAGTGAAGGGTAACATGGACTATGTGCCAGAGCTGGTATGTCTTGCAGCCTTAACTTCTGAATTTACTATGCTTTTCCATGCTTTGAGTTTGTGACCAATGCTTATATCATTATTGTGTAAGAATGTGTAACAATCCAAGCCTACCGCTAGCGGATACTGTCTTCTTTAAACTTTCCCTTCCGAACTTCTCCTCAAGGTTTTAAAACGCATCTACTATGGAGAGGATCTAGCCCTACTCCGACCCGTGTCTCGCACCTTCTGAAACCTGGCTAGACCCCCTAAATAGTAGACGCGTTTTAAAATCTTGAGAGAAAACCCAAAGAACAATATCTGCGAGTACTAGGCTTGGGATGTTATAAAAAGTATCAAAGTCAATCACCGGACGGTGCGAAACACTGGTCAAAGTAGGGCTAGACCCTCTCCAACCAATGTGCGATCTCACAATCCACCCCATTGGGAGCCAGCGTCTTCACTGACACACTGCCCGATATCTGGCTCTGATACTATTTGTAATAGTCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTTGGGTTTCCTCTCAAGGTTTTAAAACGGTCTACTAGGGAGAAGTTTTTACACCCTTATAAGGAATGCTTCGTTCCCCTCTCCAACCAATGTGGGATCTCACGTTAACAAACCATAACGCACATCTTCAAGTGAAAGACCAATTATAATTCACGCTTAATGGCATTTGACAGTTTGATGAACAAAGAGAACATGTAGCAGTTGAGCAAATACTGCAAGTTGTTTTTCTTGACCCGCAGCATTCTAATCCTGTAAGTATTAGTAGTAAGAGGAGAGAAACACACTAAGTATGGTCAAGACTATCAATCTCCTTATTGGTTTGGATTCTTCTCCTTTTTCAGGCTTTGGAGAAGCTCTTCCGACAACTAGCTGTGGCCGAGGCTGCAACTGAGGTGCGTCAAAAGCCAGCAGAAGAAACAGACCCGAAAGTCGTTGGTGAAGGACTCGTCATCGACGAATGGGTGAGACAACGAAACTGTTCTCAACATCTTCTTCAAACCTTATTAAGCTTTGCATTCTCTGACATGCTATGGTTGTTCTTCATTTGTAGAAAGAAAGAAGGGAAAGATACCTAGCTAAGCAACAGGTTGGAGGTGTGGATTTGGTGTGAAATCGAGCTGGTCGTGTTATGAAAGTTGGAATCACATTCATGTGTGAACCTTTCTTTGAGACATTCGTCGTCGAAGAGCAGTCATCGACATCGACATTAGCAATCAAAAGCGAATAGCTTAACGACTTGATTTGTGATGGCGTTTCATGATCTTGTGTTTGTTTGATTGATTGATTGGGTTGCTGTTTCTGTTGGAGTTTGAAGGTTTTGTTGTTCTTGAAAAGTGTTGCTGTTTGTGATAAAGTTTGGGGCAAATGAGCCAAAGAATCAAGTCTTCAAAATAGCATATATCTTGTTGAGAGGCATCATTTGTGAGCCCACTTGCTGTGTGGAATGGTATCTGTTTGGTTTATATCTCCCTTTCTTTGAAATCTTTCCCTTAGTGCTTTCCTATCAGACAAAGGCACAAAAATGACTGCATATTATAGCCATTACACATCTTATGAATATATTCTAGTGAATCGGGCGGTCGCATTAGGATCAAAATACTAACTATGCTTTACTCTTTGAACGTTTCATTTTTATTCAAAATACCTTTATATTTTGTGTGAGATCTTATGTTAGTTGGAGAAGAGAACGAGCTGTTTCTTATAAGGGTATAGAAACCTTTCTCTGATAGACATGTTTTAAAATTGTGAAGCTGACGGCAATATGTAATGAGTTAAAACAGACAATATCCGCTAGTGGTAAGGTTGGATAGTTATAAATAATATCATAACCAGACAACGAGCGAGAAAAACGAACAGTAAAATGAAGTTGATGTAATGCAATGACTGTGAAAGGATGATTTTGTCCCAAAAGTGCATTTGGAAAGGCAATTATCACATATTCCCACCATGTTATGAGTTGGATAAGATATAAAGATATAAGCAAATTAAAGATGTTCTTTTCGAACAAAACACAGCTTGTTTTATCTTCGATGATTTTATAGATATGGCTATGTCAGAGGCATGACTTTAATACCACTTTTAGGGCATCATGATTGTAATATCTCAAGCCCACCGCTAGTAAATATTGTTCGCTTTAGTCCGTTATGTATCGATGCCAGCCTCACGGTTTCTCTAATTGATGTGGGATCTTATAATCCACCCCCATGGAGCCCAGCGTCTTTTTTGTTGGCACACTGCCCGATGTCTGGCTCTGATACCATTTGTAACAACTCAAGCCCACTACTAGTAGATATTTTCTGCTTTAACCCATTATGTATCGTCGTCTGCTTCAGGGTTTCTCCAACTGATGTGGGATCTCACAGTCCACACTCTTGGGGACTAGTGTCCTCACTATCACACTGCACGTCAACCTCACAGTTTTAAAACATGTCTACTAAACAGAGGTTTTCACATCTTTACAATGAATGTTTCTTTTCCCTCTCTACCCAATGTGGGATCTCACAACAACCTTTTATATATCTCCACGATTGTATATATAATCTACTTTGAATATAAACTCTCGTTGATTCAACCCGAAGTCATTAATTAGACTCTTCAAATATAAAAATACAAATAATCCATGAAGATTAATCATAGGCTGACCTGTCGAATTGCACAATGAGCCCATGCTGACGCCAAGCTGAGTTGGAAATGCCACAAATTTTAAAGCATTGTCCTTTTTCTTTGTCAGACGTAGAAGAAAAATAAATAAATAAATATTTAAGATACTTCCAATACCATACTGCACTCCCACGTGAGACCCATTGCCTGCCACGTGGTTGTGTATTTCTATGTAACACTGTATCTGGACTATAATCCCTAACGCAACCACGTGTATCCATCAACGCCTCGTCATCACAACACGACAATTTTAATACTACCATTCTCGAATCATTGCACTCTTTTTTTCTTTCTTTATTATAAATTTGGTGACATGGCTGGAATTAGTCCATGCTGGATTAGCCACGCCATGCCACGTTGCTTACATTTTTAAATTTTAAAAACATAATTAAAAATAAATTCTATCGAGGCTCTCGCAAACTATATAAGGTAAGCTTTGACAGCGCTCCGCCGAAGCCGGAACGATTTCTTTTCTCCTCATATCGGAAGTTATTTGAAGATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGACACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAATGCGGAAACAACCGCCGTAGCTGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGGGGCAAGCCGATGAGTCTCTCCGCCGAGTTATGTACTTCAATTGCTGGGGCCAAGGCTGA ATGGCTGTCGCTGGTCAGAAATCAGACCTCGATGGCAAGGTTTGGAGCCTTTGTAGTATACCCTTTTGGCAAAACGGCAATGTCTCCTCGTCTTCTGGTTCTTCGTCGACTGCTATTCATCGCGTTAATGAGCAAAGTAATGGTCATAAGCCAACAGAGAACTCGGGCTCCTATCCTTCTGGCAAGGTTTCGTTCATTGCGAAATCTCTACTTCCTACCAGAAGAAGGCTTCGTCTCGATCCTTCCAACAAGCTCTACTTTCCATATGAACCTGGGAAGCAGGTAAAGAGTGCTATTGAGATACAGAATACGAGCAAGAATCATGTGGCTTTCAAGTTTCAAACGACCGCGCCAAAGAGCTGCTACATGCGTCCTCCTGGCGGTATACTTGCTCCTGGTGAAAGTATCATCGCAACGGTGTTCAAGTTTGTGGAGCCACTAGAGAACAATGAGAAGCCTGTGGATCAAAAGAGGAGGGTTAAGTTTAAGATTGTGAGCTTGAAAGTGAAGGGTAACATGGACTATGTGCCAGAGCTGTTTGATGAACAAAGAGAACATGTAGCAGTTGAGCAAATACTGCAAGTTGTTTTTCTTGACCCGCAGCATTCTAATCCTGCTTTGGAGAAGCTCTTCCGACAACTAGCTGTGGCCGAGGCTGCAACTGAGGTGCGTCAAAAGCCAGCAGAAGAAACAGACCCGAAAGTCGTTGGTGAAGGACTCGTCATCGACGAATGGAAAGAAAGAAGGGAAAGATACCTAGCTAAGCAACAGGTTGGAGCGCTCCGCCGAAGCCGGAACGATTTCTTTTCTCCTCATATCGGAAGTTATTTGAAGATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGACACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAATGCGGAAACAACCGCCGTAGCTGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGGGGCAAGCCGATGAGTCTCTCCGCCGAGTTATGTACTTCAATTGCTGGGGCCAAGGCTGA ATGGCTGTCGCTGGTCAGAAATCAGACCTCGATGGCAAGGTTTGGAGCCTTTGTAGTATACCCTTTTGGCAAAACGGCAATGTCTCCTCGTCTTCTGGTTCTTCGTCGACTGCTATTCATCGCGTTAATGAGCAAAGTAATGGTCATAAGCCAACAGAGAACTCGGGCTCCTATCCTTCTGGCAAGGTTTCGTTCATTGCGAAATCTCTACTTCCTACCAGAAGAAGGCTTCGTCTCGATCCTTCCAACAAGCTCTACTTTCCATATGAACCTGGGAAGCAGGTAAAGAGTGCTATTGAGATACAGAATACGAGCAAGAATCATGTGGCTTTCAAGTTTCAAACGACCGCGCCAAAGAGCTGCTACATGCGTCCTCCTGGCGGTATACTTGCTCCTGGTGAAAGTATCATCGCAACGGTGTTCAAGTTTGTGGAGCCACTAGAGAACAATGAGAAGCCTGTGGATCAAAAGAGGAGGGTTAAGTTTAAGATTGTGAGCTTGAAAGTGAAGGGTAACATGGACTATGTGCCAGAGCTGTTTGATGAACAAAGAGAACATGTAGCAGTTGAGCAAATACTGCAAGTTGTTTTTCTTGACCCGCAGCATTCTAATCCTGCTTTGGAGAAGCTCTTCCGACAACTAGCTGTGGCCGAGGCTGCAACTGAGGTGCGTCAAAAGCCAGCAGAAGAAACAGACCCGAAAGTCGTTGGTGAAGGACTCGTCATCGACGAATGGAAAGAAAGAAGGGAAAGATACCTAGCTAAGCAACAGGTTGGAGCGCTCCGCCGAAGCCGGAACGATTTCTTTTCTCCTCATATCGGAAGTTATTTGAAGATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGGCCGACACGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAATGCGGAAACAACCGCCGTAGCTGTAGATCTCCGCCAATTTTCAACAGCGACGAGTCACTCGAATCGCGATGGAGACGAGAAGGGGCAAGCCGATGAGTCTCTCCGCCGAGTTATGTACTTCAATTGCTGGGGCCAAGGCTGA MAVAGQKSDLDGKVWSLCSIPFWQNGNVSSSSGSSSTAIHRVNEQSNGHKPTENSGSYPSGKVSFIAKSLLPTRRRLRLDPSNKLYFPYEPGKQVKSAIEIQNTSKNHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPLENNEKPVDQKRRVKFKIVSLKVKGNMDYVPELFDEQREHVAVEQILQVVFLDPQHSNPALEKLFRQLAVAEAATEVRQKPAEETDPKVVGEGLVIDEWKERRERYLAKQQVGALRRSRNDFFSPHIGSYLKMSYLGRVWMAASVAVVHGGQSDGRHGSAEGILTLHRNAETTAVAVDLRQFSTATSHSNRDGDEKGQADESLRRVMYFNCWGQG Homology
BLAST of Csor.00g131670 vs. ExPASy Swiss-Prot
Match: Q8VYN2 (Vesicle-associated protein 4-2 OS=Arabidopsis thaliana OX=3702 GN=PVA42 PE=1 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-88 Identity = 178/288 (61.81%), Postives = 210/288 (72.92%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy Swiss-Prot
Match: Q1ECE0 (Vesicle-associated protein 4-1 OS=Arabidopsis thaliana OX=3702 GN=PVA41 PE=2 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 9.1e-81 Identity = 162/248 (65.32%), Postives = 199/248 (80.24%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy Swiss-Prot
Match: Q8LPQ7 (Vesicle-associated protein 4-3 OS=Arabidopsis thaliana OX=3702 GN=PVA43 PE=2 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 5.5e-78 Identity = 160/286 (55.94%), Postives = 204/286 (71.33%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.5e-06 Identity = 37/129 (28.68%), Postives = 69/129 (53.49%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.9e-06 Identity = 40/128 (31.25%), Postives = 65/128 (50.78%), Query Frame = 0
BLAST of Csor.00g131670 vs. NCBI nr
Match: KAG6604822.1 (Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 719 bits (1857), Expect = 1.39e-261 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
BLAST of Csor.00g131670 vs. NCBI nr
Match: KAG7034938.1 (Vesicle-associated protein 4-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 513 bits (1321), Expect = 1.77e-181 Identity = 259/261 (99.23%), Postives = 260/261 (99.62%), Query Frame = 0
BLAST of Csor.00g131670 vs. NCBI nr
Match: XP_022947458.1 (vesicle-associated protein 4-2-like [Cucurbita moschata]) HSP 1 Score: 511 bits (1315), Expect = 1.45e-180 Identity = 258/261 (98.85%), Postives = 259/261 (99.23%), Query Frame = 0
BLAST of Csor.00g131670 vs. NCBI nr
Match: XP_023532461.1 (vesicle-associated protein 4-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 509 bits (1311), Expect = 5.90e-180 Identity = 257/261 (98.47%), Postives = 259/261 (99.23%), Query Frame = 0
BLAST of Csor.00g131670 vs. NCBI nr
Match: XP_022970681.1 (vesicle-associated protein 4-2-like [Cucurbita maxima]) HSP 1 Score: 505 bits (1301), Expect = 1.97e-178 Identity = 255/261 (97.70%), Postives = 257/261 (98.47%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy TrEMBL
Match: A0A6J1G6M8 (vesicle-associated protein 4-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451313 PE=4 SV=1) HSP 1 Score: 511 bits (1315), Expect = 7.03e-181 Identity = 258/261 (98.85%), Postives = 259/261 (99.23%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy TrEMBL
Match: A0A6J1I192 (vesicle-associated protein 4-2-like OS=Cucurbita maxima OX=3661 GN=LOC111469594 PE=4 SV=1) HSP 1 Score: 505 bits (1301), Expect = 9.52e-179 Identity = 255/261 (97.70%), Postives = 257/261 (98.47%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy TrEMBL
Match: A0A6J1CFB2 (vesicle-associated protein 4-2-like OS=Momordica charantia OX=3673 GN=LOC111011002 PE=4 SV=1) HSP 1 Score: 436 bits (1121), Expect = 2.37e-151 Identity = 220/261 (84.29%), Postives = 236/261 (90.42%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy TrEMBL
Match: A0A0A0KE43 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G123970 PE=4 SV=1) HSP 1 Score: 416 bits (1069), Expect = 2.06e-143 Identity = 214/264 (81.06%), Postives = 233/264 (88.26%), Query Frame = 0
BLAST of Csor.00g131670 vs. ExPASy TrEMBL
Match: A0A5D3BT76 (Vesicle-associated protein 4-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00900 PE=4 SV=1) HSP 1 Score: 412 bits (1060), Expect = 4.64e-142 Identity = 213/263 (80.99%), Postives = 231/263 (87.83%), Query Frame = 0
BLAST of Csor.00g131670 vs. TAIR 10
Match: AT4G21450.1 (PapD-like superfamily protein ) HSP 1 Score: 328.2 bits (840), Expect = 8.5e-90 Identity = 178/288 (61.81%), Postives = 210/288 (72.92%), Query Frame = 0
BLAST of Csor.00g131670 vs. TAIR 10
Match: AT4G21450.3 (PapD-like superfamily protein ) HSP 1 Score: 314.7 bits (805), Expect = 9.7e-86 Identity = 177/307 (57.65%), Postives = 210/307 (68.40%), Query Frame = 0
BLAST of Csor.00g131670 vs. TAIR 10
Match: AT5G54110.1 (membrane-associated mannitol-induced ) HSP 1 Score: 302.0 bits (772), Expect = 6.5e-82 Identity = 162/248 (65.32%), Postives = 199/248 (80.24%), Query Frame = 0
BLAST of Csor.00g131670 vs. TAIR 10
Match: AT4G05060.1 (PapD-like superfamily protein ) HSP 1 Score: 292.7 bits (748), Expect = 3.9e-79 Identity = 160/286 (55.94%), Postives = 204/286 (71.33%), Query Frame = 0
BLAST of Csor.00g131670 vs. TAIR 10
Match: AT4G21450.2 (PapD-like superfamily protein ) HSP 1 Score: 214.2 bits (544), Expect = 1.8e-55 Identity = 120/210 (57.14%), Postives = 141/210 (67.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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