Csor.00g130600 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g130600
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Actin-depolymerizing factor
Location	Csor_Chr02: 1154981 .. 1155892 (+)
RNA-Seq Expression	Csor.00g130600
Synteny	Csor.00g130600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGGCTTTCAAGATGGTATTAATTTGTGCTCTCCGATTGTTGCTCTTTCTTCTTTTTTCTTTCTTGATTCTTGAATTTTGATCTTGTTAATGGCGAATCTCAGGCGACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAAATGAAATGGAAGAAGGTGCATAGGTATATTGTTTTTAAGATCGATGAAGGATCGAGGTTGGTTACTGTTGACAAGGTCGGCGGTTCGGCAGAAAGCTACGATGATCTCACCGCCTCATTGCCGACCGACGACTGTCGGTATGCTGTGTTCGATTTCGACTTCGTCACCATTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCCTGGTATGTTGCTCGATTCTTCTCTGTTTTTCGTCGATCGCGTCCGTTCTTCACTCATCTAACCTCTGCTTCAGTTGAATCGTCCAATTCTCTCTGATTACTTTAATCTTGCGAAATACGCTTCTGTTTGGGCGGGAACTTTGATAACTGACTCAAAGTTTCCTCAAATTCATAATCTCTAATTCTGTTATAGATCTTGACTAATTACATGTTCCGAACAGCATAATCGGACATCTGAAATCGAATTTCTCTGGAAAAACTAACTGATTATATGATTATTCGTTTTCTCGACAAAGAATTTATCACTCGAGCACTGTAATGCAAGGATTTGGAGGACGGATCTGAATCTAGAACTGAAACAGAAATTGATTCTTCGGTTAATAAATCTGGTGCAGGTCACCGACCGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCAAAAGCTGGACTGAGGAGAGTGCTGGAAGGTATACATTACGAGGTCCAAGCAACCGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAG

mRNA sequence

ATGGCGATGGCTTTCAAGATGGCGACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAAATGAAATGGAAGAAGGTGCATAGGTATATTGTTTTTAAGATCGATGAAGGATCGAGGTTGGTTACTGTTGACAAGGTCGGCGGTTCGGCAGAAAGCTACGATGATCTCACCGCCTCATTGCCGACCGACGACTGTCGGTATGCTGTGTTCGATTTCGACTTCGTCACCATTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCCTGGTCACCGACCGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCAAAAGCTGGACTGAGGAGAGTGCTGGAAGGTATACATTACGAGGTCCAAGCAACCGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAG

Coding sequence (CDS)

ATGGCGATGGCTTTCAAGATGGCGACCACTGGAATGTGGGTGAGCGATGAGTGCAAGAATTCGTTCATGGAAATGAAATGGAAGAAGGTGCATAGGTATATTGTTTTTAAGATCGATGAAGGATCGAGGTTGGTTACTGTTGACAAGGTCGGCGGTTCGGCAGAAAGCTACGATGATCTCACCGCCTCATTGCCGACCGACGACTGTCGGTATGCTGTGTTCGATTTCGACTTCGTCACCATTGATAATTGCCGGAAGAGCAAGATCTTCTTCATCGCCTGGTCACCGACCGCATCAAGAATTAGAGCAAAAATTCTATACGCAACTTCAAAAGCTGGACTGAGGAGAGTGCTGGAAGGTATACATTACGAGGTCCAAGCAACCGATCCAACTGAGATGGGGATCGATGTGATCAAGGACAGAGCCAAATAG

Protein sequence

MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK

Homology

[Close]

BLAST of Csor.00g130600 vs. ExPASy Swiss-Prot
Match: Q9ZNT3 (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-65
Identity = 121/143 (84.62%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG+ ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
             SLP DDCRYAVFDFDFVT+DNCRKSKIFFIAWSP AS+IRAKILYATSK GLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYE+QATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Csor.00g130600 vs. ExPASy Swiss-Prot
Match: O49606 (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-61
Identity = 108/141 (76.60%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 3   MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTA 62
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG + ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIH 122
           SLP DDCRYAVFDFD+VT+DNCR SKIFFI WSP ASRIR K++YATSK+GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YEVQATDPTEMGIDVIKDRAK 144
           YE+QATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Csor.00g130600 vs. ExPASy Swiss-Prot
Match: Q10P87 (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-60
Identity = 111/143 (77.62%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMA+KMAT GM V +EC+  FMEMKWKKVHR++V+KIDE SR V VDKVGG  E Y++L
Sbjct: 1   MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
            A+LPTDDCRYAVFDFDFVT+DNC+KSKIFFIAWSPTASRIRAKILYATSK GLRRVL+G
Sbjct: 61  VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           +HYEVQATD +EMG DVI+ RA+
Sbjct: 121 VHYEVQATDSSEMGYDVIRGRAQ 143

[Close]

BLAST of Csor.00g130600 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.1e-49
Identity = 88/135 (65.19%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPTD 67
           A++GM V+D  KN+F+E+K KKVHRY++FKIDE  + V V+K GG AES+D+  A+LP +
Sbjct: 8   ASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPEN 67

Query: 68  DCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFFIAWSP +SRIRAK+LYATSK   RR L+G+HYE+QA
Sbjct: 68  DCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQA 127

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTEM ++V+++RA
Sbjct: 128 TDPTEMDLEVLRERA 142

[Close]

BLAST of Csor.00g130600 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.5e-46
Identity = 85/135 (62.96%), Postives = 109/135 (80.74%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPTD 67
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G   ESYDD  ASLP +
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSK  L R L+GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

[Close]

BLAST of Csor.00g130600 vs. NCBI nr
Match: XP_022947625.1 (actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022971127.1 actin-depolymerizing factor 5-like [Cucurbita maxima] >XP_023532678.1 actin-depolymerizing factor 5-like [Cucurbita pepo subsp. pepo] >KAG6604928.1 Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289 bits (739), Expect = 2.02e-98
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. NCBI nr
Match: KAG7027007.1 (Actin-depolymerizing factor 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286 bits (733), Expect = 1.66e-97
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
            ASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  IASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. NCBI nr
Match: XP_023512924.1 (actin-depolymerizing factor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284 bits (727), Expect = 1.37e-96
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLP DDCRYAVFDFDFVT+DNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYE+QATDPTEMG+DVIKDRAK
Sbjct: 121 IHYELQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. NCBI nr
Match: XP_022943996.1 (actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-depolymerizing factor 5-like [Cucurbita maxima] >KAG7010856.1 Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283 bits (725), Expect = 2.76e-96
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLP DDCRYAVFDFDFVT+DNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. NCBI nr
Match: XP_022146103.1 (actin-depolymerizing factor 5-like [Momordica charantia])

HSP 1 Score: 283 bits (723), Expect = 5.57e-96
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLPTDDCRYAVFDFDFVT+DNCRKSKIFFIAWSPTASRIRAKILYATSKAGLR VLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRGVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. ExPASy TrEMBL
Match: A0A6J1I143 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111469893 PE=3 SV=1)

HSP 1 Score: 289 bits (739), Expect = 9.77e-99
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. ExPASy TrEMBL
Match: A0A6J1G7F5 (actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111451431 PE=3 SV=1)

HSP 1 Score: 289 bits (739), Expect = 9.77e-99
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. ExPASy TrEMBL
Match: A0A6J1JEW6 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 PE=3 SV=1)

HSP 1 Score: 283 bits (725), Expect = 1.33e-96
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLP DDCRYAVFDFDFVT+DNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. ExPASy TrEMBL
Match: A0A6J1FT84 (actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560 PE=3 SV=1)

HSP 1 Score: 283 bits (725), Expect = 1.33e-96
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLP DDCRYAVFDFDFVT+DNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. ExPASy TrEMBL
Match: A0A6J1CXN9 (actin-depolymerizing factor 5-like OS=Momordica charantia OX=3673 GN=LOC111015397 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 2.69e-96
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
           TASLPTDDCRYAVFDFDFVT+DNCRKSKIFFIAWSPTASRIRAKILYATSKAGLR VLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRGVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 143
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Csor.00g130600 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 249.6 bits (636), Expect = 1.5e-66
Identity = 121/143 (84.62%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG+ ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120
             SLP DDCRYAVFDFDFVT+DNCRKSKIFFIAWSP AS+IRAKILYATSK GLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYE+QATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Csor.00g130600 vs. TAIR 10
Match: AT4G34970.1 (actin depolymerizing factor 9 )

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-62
Identity = 108/141 (76.60%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 3   MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTA 62
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG + ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIH 122
           SLP DDCRYAVFDFD+VT+DNCR SKIFFI WSP ASRIR K++YATSK+GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YEVQATDPTEMGIDVIKDRAK 144
           YE+QATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Csor.00g130600 vs. TAIR 10
Match: AT2G16700.2 (actin depolymerizing factor 5 )

HSP 1 Score: 229.2 bits (583), Expect = 2.1e-60
Identity = 110/132 (83.33%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPTDDCRY 71
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG+ ESY DL  SLP DDCRY
Sbjct: 1   MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 60

Query: 72  AVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQATDPT 131
           AVFDFDFVT+DNCRKSKIFFIAWSP AS+IRAKILYATSK GLRRVLEGIHYE+QATDPT
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPT 120

Query: 132 EMGIDVIKDRAK 144
           EMG D+I+DRAK
Sbjct: 121 EMGFDIIQDRAK 132

[Close]

BLAST of Csor.00g130600 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 184.9 bits (468), Expect = 4.6e-47
Identity = 85/135 (62.96%), Postives = 109/135 (80.74%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPTD 67
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G   ESYDD  ASLP +
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSK  L R L+GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

[Close]

BLAST of Csor.00g130600 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-44
Identity = 79/134 (58.96%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDLTASLPTD 67
           + +GM V+DECK  F+E+K K+ +R+IVFKIDE ++ V ++K+G   E+YDD T+S+P D
Sbjct: 4   SASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDD 63

Query: 68  DCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEGIHYEVQA 127
           +CRYAV+DFDF T DNC+KSKIFFIAWSP  SR+R+K+LYA+SK   +R +EGI  E+QA
Sbjct: 64  ECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQA 123

Query: 128 TDPTEMGIDVIKDR 142
           TDP+EM +D+IK R
Sbjct: 124 TDPSEMSLDIIKGR 137

The following BLAST results are available for this feature:

BLAST of Csor.00g130600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNT3	2.1e-65	84.62	Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1	[more]
O49606	1.4e-61	76.60	Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2	[more]
Q10P87	1.6e-60	77.62	Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 P...	[more]
Q8SAG3	8.1e-49	65.19	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9ZSK2	6.5e-46	62.96	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]

BLAST of Csor.00g130600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947625.1	2.02e-98	100.00	actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022971127.1 actin-de...	[more]
KAG7027007.1	1.66e-97	99.30	Actin-depolymerizing factor 5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512924.1	1.37e-96	97.20	actin-depolymerizing factor 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943996.1	2.76e-96	97.20	actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-de...	[more]
XP_022146103.1	5.57e-96	97.20	actin-depolymerizing factor 5-like [Momordica charantia]	[more]

BLAST of Csor.00g130600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I143	9.77e-99	100.00	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111469893 P...	[more]
A0A6J1G7F5	9.77e-99	100.00	actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111451431...	[more]
A0A6J1JEW6	1.33e-96	97.20	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 P...	[more]
A0A6J1FT84	1.33e-96	97.20	actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560...	[more]
A0A6J1CXN9	2.69e-96	97.20	actin-depolymerizing factor 5-like OS=Momordica charantia OX=3673 GN=LOC11101539...	[more]

BLAST of Csor.00g130600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16700.1	1.5e-66	84.62	actin depolymerizing factor 5	[more]
AT4G34970.1	1.0e-62	76.60	actin depolymerizing factor 9	[more]
AT2G16700.2	2.1e-60	83.33	actin depolymerizing factor 5	[more]
AT2G31200.1	4.6e-47	62.96	actin depolymerizing factor 6	[more]
AT4G00680.1	2.1e-44	58.96	actin depolymerizing factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 16..143 e-value: 1.2E-47 score: 174.3
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 18..140 e-value: 3.2E-32 score: 110.9
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 11..143 score: 35.343964
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 2..143 e-value: 3.2E-44 score: 152.5
None	No IPR available	PANTHER	PTHR11913:SF98	ACTIN DEPOLYMERIZING FACTOR 5-RELATED	coord: 5..143
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 6..141
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 5..143
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 10..142 e-value: 2.7295E-58 score: 175.438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g130600.m01	Csor.00g130600.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding