Csor.00g129480 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g129480
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr12: 10772739 .. 10773032 (+)
RNA-Seq ExpressionCsor.00g129480
SyntenyCsor.00g129480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTAGATGTGGTCGTGGACGTGGTAACTCTGTTCTTGGACACCTCTCCTCCTTTCTATGCTCCGCAAGGCTCTGATCAAGACCTTTGCCTGCTCCGGTGTAGTCTAAGCTATGTTTTCAATTCTTTCATACTGCTCGCGAATGTCAACAGCATAAGAAGCAAGCCTTTTATACAGATCAGTTCTCTCTCCCAAGGTCAATCTCTTTTTGAAGTTCAGTTTGAAGGTGGAGTTTCCATTCCGAAGTTTACGTATACGGATTGCTCCCGGCTCGGAGAAGTTCATGCTTGA

mRNA sequence

ATGGTCGTAGATGTGGTCGTGGACGTGGTAACTCTGTTCTTGGACACCTCTCCTCCTTTCTATGCTCCGCAAGGCTCTGATCAAGACCTTTGCCTGCTCCGGTGTAGTCTAAGCTATGTTTTCAATTCTTTCATACTGCTCGCGAATGTCAACAGCATAAGAAGCAAGCCTTTTATACAGATCAGTTCTCTCTCCCAAGGTCAATCTCTTTTTGAAGTTCAGTTTGAAGGTGGAGTTTCCATTCCGAAGTTTACGTATACGGATTGCTCCCGGCTCGGAGAAGTTCATGCTTGA

Coding sequence (CDS)

ATGGTCGTAGATGTGGTCGTGGACGTGGTAACTCTGTTCTTGGACACCTCTCCTCCTTTCTATGCTCCGCAAGGCTCTGATCAAGACCTTTGCCTGCTCCGGTGTAGTCTAAGCTATGTTTTCAATTCTTTCATACTGCTCGCGAATGTCAACAGCATAAGAAGCAAGCCTTTTATACAGATCAGTTCTCTCTCCCAAGGTCAATCTCTTTTTGAAGTTCAGTTTGAAGGTGGAGTTTCCATTCCGAAGTTTACGTATACGGATTGCTCCCGGCTCGGAGAAGTTCATGCTTGA

Protein sequence

MVVDVVVDVVTLFLDTSPPFYAPQGSDQDLCLLRCSLSYVFNSFILLANVNSIRSKPFIQISSLSQGQSLFEVQFEGGVSIPKFTYTDCSRLGEVHA
Homology
[Close]
BLAST of Csor.00g129480 vs. NCBI nr
Match: KAG6585989.1 (hypothetical protein SDJN03_18722, partial [Cucurbita argyrosperma subsp. sororia] >KAG6590350.1 hypothetical protein SDJN03_15773, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193 bits (490), Expect = 6.44e-62
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MVVDVVVDVVTLFLDTSPPFYAPQGSDQDLCLLRCSLSYVFNSFILLANVNSIRSKPFIQ 60
          MVVDVVVDVVTLFLDTSPPFYAPQGSDQDLCLLRCSLSYVFNSFILLANVNSIRSKPFIQ
Sbjct: 1  MVVDVVVDVVTLFLDTSPPFYAPQGSDQDLCLLRCSLSYVFNSFILLANVNSIRSKPFIQ 60

Query: 61 ISSLSQGQSLFEVQFEGGVSIPKFTYTDCSRLGEVHA 97
          ISSLSQGQSLFEVQFEGGVSIPKFTYTDCSRLGEVHA
Sbjct: 61 ISSLSQGQSLFEVQFEGGVSIPKFTYTDCSRLGEVHA 97

[Close]
BLAST of Csor.00g129480 vs. NCBI nr
Match: KAG6573505.1 (hypothetical protein SDJN03_27392, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.5 bits (158), Expect = 5.31e-10
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 4   DVVVDVVTLFLDTSPPFYAPQGSDQDLCLLRCS 36
           +VVVDVVTLFL TSPPFY+PQGSDQDLCLLRCS
Sbjct: 218 NVVVDVVTLFLATSPPFYSPQGSDQDLCLLRCS 250

The following BLAST results are available for this feature:
BLAST of Csor.00g129480 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g129480 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585989.16.44e-62100.00hypothetical protein SDJN03_18722, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6573505.15.31e-1090.91hypothetical protein SDJN03_27392, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g129480 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g129480 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g129480.m01Csor.00g129480.m01mRNA