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Csor.00g128950 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACTGCTCCTTCTCCAATTTGCTTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGGTACCATTCTCTTCGTTCCTTTTTCTCTATCAATCTGCTATGAACTTGAACGGAAGATAGAAGTTAGAAGACTGATAGCATACATTTTAATTACGAATTTACCTTAGGAAGCAAATTTTGCAGTCTATTTATGCCTGATTGTTGTTGTGGCAAAGAATAACATATTGATTTTCTGTTTCAATTGTTCATATTATGTTCAGCCAAAAAGTTCAATGGACTAGAACATAATTTGTAGTGATAATGTATGTACTTGCTATCAATACCTCCTCACGATTTGAAAGTAGTAAAGAAGAAAGAAGTCTCAATTGTTCATATCTCTGCCTTGCATACTGCTAAGATCAATGCCAAAGAATAATGGGTGGTTATCCTTTCCTGGTAACAGCAAATGAGAAATTCATGTTGGTATGCAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGTAATGGTATTTAGGAAGGGTTCCATGAGTTTGTTTGATCTTGATCTTGATCAAATATGTTTCACAAAGGGAGATTGGTTTTGTTTGTAACACTTGAAAATTTGCAGGTAGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTCCAACAGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAG ATGGCGACTGCTCCTTCTCCAATTTGCTTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGTAGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTCCAACAGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAG ATGGCGACTGCTCCTTCTCCAATTTGCTTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGTAGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTCCAACAGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAG MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN Homology
BLAST of Csor.00g128950 vs. ExPASy Swiss-Prot
Match: Q96KR6 (Protein FAM210B, mitochondrial OS=Homo sapiens OX=9606 GN=FAM210B PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 2.4e-06 Identity = 34/103 (33.01%), Postives = 55/103 (53.40%), Query Frame = 0
BLAST of Csor.00g128950 vs. ExPASy Swiss-Prot
Match: Q9D8B6 (Protein FAM210B, mitochondrial OS=Mus musculus OX=10090 GN=Fam210b PE=1 SV=3) HSP 1 Score: 49.7 bits (117), Expect = 4.5e-05 Identity = 32/97 (32.99%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of Csor.00g128950 vs. NCBI nr
Match: KAG6570471.1 (Family With Sequence Similarity 210 Member B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 377 bits (969), Expect = 1.10e-131 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Csor.00g128950 vs. NCBI nr
Match: XP_022943302.1 (uncharacterized protein LOC111448115 [Cucurbita moschata] >XP_022986434.1 uncharacterized protein LOC111484182 [Cucurbita maxima]) HSP 1 Score: 376 bits (965), Expect = 4.48e-131 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0
BLAST of Csor.00g128950 vs. NCBI nr
Match: KAG7010336.1 (hypothetical protein SDJN02_27129 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375 bits (963), Expect = 9.04e-131 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0
BLAST of Csor.00g128950 vs. NCBI nr
Match: XP_023512163.1 (uncharacterized protein LOC111776967 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374 bits (961), Expect = 1.82e-130 Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0
BLAST of Csor.00g128950 vs. NCBI nr
Match: XP_038901803.1 (uncharacterized protein LOC120088508 [Benincasa hispida]) HSP 1 Score: 284 bits (727), Expect = 8.51e-95 Identity = 164/203 (80.79%), Postives = 171/203 (84.24%), Query Frame = 0
BLAST of Csor.00g128950 vs. ExPASy TrEMBL
Match: A0A6J1JG12 (uncharacterized protein LOC111484182 OS=Cucurbita maxima OX=3661 GN=LOC111484182 PE=4 SV=1) HSP 1 Score: 376 bits (965), Expect = 2.17e-131 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0
BLAST of Csor.00g128950 vs. ExPASy TrEMBL
Match: A0A6J1FSN5 (uncharacterized protein LOC111448115 OS=Cucurbita moschata OX=3662 GN=LOC111448115 PE=4 SV=1) HSP 1 Score: 376 bits (965), Expect = 2.17e-131 Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0
BLAST of Csor.00g128950 vs. ExPASy TrEMBL
Match: A0A0A0KEW3 (DUF1279 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425800 PE=4 SV=1) HSP 1 Score: 281 bits (719), Expect = 5.35e-94 Identity = 159/198 (80.30%), Postives = 167/198 (84.34%), Query Frame = 0
BLAST of Csor.00g128950 vs. ExPASy TrEMBL
Match: A0A5D3B9U1 (DUF1279 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00220 PE=4 SV=1) HSP 1 Score: 278 bits (710), Expect = 1.26e-92 Identity = 158/198 (79.80%), Postives = 166/198 (83.84%), Query Frame = 0
BLAST of Csor.00g128950 vs. ExPASy TrEMBL
Match: A0A1S3BN10 (uncharacterized protein LOC103491427 OS=Cucumis melo OX=3656 GN=LOC103491427 PE=4 SV=1) HSP 1 Score: 278 bits (710), Expect = 1.26e-92 Identity = 158/198 (79.80%), Postives = 166/198 (83.84%), Query Frame = 0
BLAST of Csor.00g128950 vs. TAIR 10
Match: AT2G27290.1 (Protein of unknown function (DUF1279) ) HSP 1 Score: 201.8 bits (512), Expect = 5.0e-52 Identity = 116/176 (65.91%), Postives = 136/176 (77.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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