Csor.00g128910 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGATCCCTCTAGACCCGTCACTGGCTATCCTGCTTACCCCAACGGCCGGCCGCCGTCCTCCAATTCTCAGCCTCATGGCCAAGCCTATCCCTACGCTGCTCCTCCTTATTCCTATCCCACCCAGTACGCCAACCCCTACGATTCTACCCATCAGAATGCTCGCCTCTCATTTCTTCGTGCTATTATTGCCGGAATCATCGTCGTCTTCATCATCACCGCCATCATTCTTTTCATAATCTGGCTCGTTCTCCGTCCCCAACTTCCTGAGTTTCGCGTCGACTCATTTCAGGTTACCAATTTTTCCGCCGCCTCTCAGTCCCTCTCCGCCTTATGGTTTGTTGGGTTTTCCGTCTTTAATCCCAACAAGAAGATGACCATCTCTTACGACATCGTCGAACCCACCGTCTTTTACAAGAATGAATTCCTTTCCCAGACTCGAGTCCCTCCATTCACCCAGGATAAGAGGACTCAAACGGCTGTTAATGCCACTCTCTCCGCTCTTAATGCCTACATCGAAACTTCGTCTGTGAATGAAATTAACGACGACCGCCGACGAGGGACCGTCCAATTCAATGTGGTGGTCTCGGCTCGTGTCGGGTTCCGAGCGGGTTGGTGGAGGACCAGGAGACGATTGCTTAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCACTTCCGGTAAGTTGATGGGTGAACCAAGGGCCTGCAGAGTGGGTATATGAGTGATTTTCTGCTGTTATAGTCGGTGCTTGATTTAATACCACTTAACCCATATGAGGAATTCATGTAGGCGTAAATGTACATGGATTTTAGGCTGAGTGAGTAGCAGTAGTCTCTAAGTGGAGGTTGTGTATAGCTTATAATACAATTTTTGCTATCTGATTCTGATGTCGATATCTTATCTCCTCCTTTTGGAATAAGGAAAATGGTTTCTTGTTTTATTGAGATGTATCAGTCTTCTATCCTGAACTGAGGGAACTGTAAAAAAATGGAGAATATCTGTTGGTGTCTGCAGACAGGATATGAACAACATTTTTAGTCTCTTCACTAGACGATATTCGATATAGCTTATTGCAATTCAGTGCATACCATGATTTTTAACGCCCAAGTTAATTATTTCTGAAGTGATTAGGTGCATGCTTGTTAAGACCTCTCCAATTTGTAACGAAGGAGGTATAACTATAGGAAGTAAAAATATTCGACAGTTTACACCAAGATATAGCTTGGTAAACAACCTGTCTTTTCTGCGAATATTCTTTGATTTCTTTCTTTCCATACATTCCAAAAGAAAGTCATGATGAAGTTTTCCCATAGTAGGGCTTTTGCATTCTTGAAAGGGTTGTACGTTTAGGCGGCATGTCCAATAGATATTTTACCTCTCTTGGAAATGTGAAATATGATCCGAATATATTGAGAATCATTGTCCTAAAATTCTAAGGGTATGTGCATTGCATAAATAGGTGGCTTTGAAACCAATTTGGAGAAAGAGTGATGTAAGACATTCTTTTTTTGAAGATTTTCACTTGTGCTAATGGTTTTATACGTGTTTTGTTTTGAGTTTTGAGTGCTTACGTAAGACTTGATTTTGTTGCTTCTTTTGGTGGCGGGTTAAATCTTACTAGTGCGGAGGTACTTACAGGATTGGAGCAATTCTCTACTAAGATTTAATGCTCCGTTTCACTTTAGGAGTTCGAAATATTCTTTGGTTCATCCTTTTAAGTTAGTATTATTCTCTAGTAATACATTTGCACAAGCCTTCATTGACTCAGTGAGTACCTCTTATTTGTTGCTGCTGTGGAGAACACTTCCTACTGATAAAGTAATTCTCTTATGTTCACTTTTTTCTCGTTTCAATAATGTTCTCCAATGTTAGGCCTTGGTAGGTTCCATCGTAGAAGTGGTAGATAAGAGGGAGGGTGGATAAGCAAATGTGAGACCACTTAACAAAATATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCATGTTAAAACCGCGAGACTGATGGCGATTCGTAACGGGCCGAAGTGGACAATATTTGCTAGCGGTGAGCTTGGGTTGTTACAAATGGTATCAGAGCAAGACATTCTCTTGGTGGTGTGCTAGCGAGGACGCTAGCCCCCTAGGAGGATGGATTGTGAGATTCCCATCGGTTGGAGAGGGGAATAAAACATTCCTTATAAAGGAAAACCTTGAGAGGAAGCTCGAAAGGGAAAATCCAAATAAGACAATATCTGCTAGCGGTAGGGTATGGCTGTTACAATGAAGTTGGTCGTTGGTTGGTTTGTCGGGTATGAATGTTACAATTTCTTGCCACCCACCTCGGTTTGAATGTGTTGCCCTCAAATCATGCCTGATTAGTTTCAAACTTCTAAACTAGTAGAATATGGTTGAGTTTTCCAGATTCAAGGTTTGGTGATGCTGTCTCTAGGCCATGGACAGAAGAGAGAACACAGGGGTTTATTAGCTCTCTGAACAAAACTTCCCCAGGTGAACAATTCTATCCAGAAATCTGACCCACACATGTCTCCTCGATTCTATTCCATTCTTTATGGTGTGGTTTCTCTACAATAGGGTTTAATGGTTAATATAAGAAGCTCAAATCTGGATGCCCGTATTAACTTGCTTCCTTGAATTGAACATACAATTTCATCCATAGCTTAGTGTTTACATGCCTTCTTTGTTTGGCTACAGATGTGAGATTGATTGTTCTAACAGTAACAGCCCACGAGTTTGAGTTAGAACGTAGGGATGGTGGTGTTTACCACTGGTGCCAAGCAATATAG ATGGCAGATCCCTCTAGACCCGTCACTGGCTATCCTGCTTACCCCAACGGCCGGCCGCCGTCCTCCAATTCTCAGCCTCATGGCCAAGCCTATCCCTACGCTGCTCCTCCTTATTCCTATCCCACCCAGTACGCCAACCCCTACGATTCTACCCATCAGAATGCTCGCCTCTCATTTCTTCGTGCTATTATTGCCGGAATCATCGTCGTCTTCATCATCACCGCCATCATTCTTTTCATAATCTGGCTCGTTCTCCGTCCCCAACTTCCTGAGTTTCGCGTCGACTCATTTCAGGTTACCAATTTTTCCGCCGCCTCTCAGTCCCTCTCCGCCTTATGGTTTGTTGGGTTTTCCGTCTTTAATCCCAACAAGAAGATGACCATCTCTTACGACATCGTCGAACCCACCGTCTTTTACAAGAATGAATTCCTTTCCCAGACTCGAGTCCCTCCATTCACCCAGGATAAGAGGACTCAAACGGCTGTTAATGCCACTCTCTCCGCTCTTAATGCCTACATCGAAACTTCGTCTGTGAATGAAATTAACGACGACCGCCGACGAGGGACCGTCCAATTCAATGTGGTGGTCTCGGCTCGTGTCGGGTTCCGAGCGGGTTGGTGGAGGACCAGGAGACGATTGCTTAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCACTTCCGATTCAAGGTTTGGTGATGCTGTCTCTAGGCCATGGACAGAAGAGAGAACACAGGGGTTTATTAGCTCTCTGAACAAAACTTCCCCAGATGTGAGATTGATTGTTCTAACAGTAACAGCCCACGAGTTTGAGTTAGAACGTAGGGATGGTGGTGTTTACCACTGGTGCCAAGCAATATAG ATGGCAGATCCCTCTAGACCCGTCACTGGCTATCCTGCTTACCCCAACGGCCGGCCGCCGTCCTCCAATTCTCAGCCTCATGGCCAAGCCTATCCCTACGCTGCTCCTCCTTATTCCTATCCCACCCAGTACGCCAACCCCTACGATTCTACCCATCAGAATGCTCGCCTCTCATTTCTTCGTGCTATTATTGCCGGAATCATCGTCGTCTTCATCATCACCGCCATCATTCTTTTCATAATCTGGCTCGTTCTCCGTCCCCAACTTCCTGAGTTTCGCGTCGACTCATTTCAGGTTACCAATTTTTCCGCCGCCTCTCAGTCCCTCTCCGCCTTATGGTTTGTTGGGTTTTCCGTCTTTAATCCCAACAAGAAGATGACCATCTCTTACGACATCGTCGAACCCACCGTCTTTTACAAGAATGAATTCCTTTCCCAGACTCGAGTCCCTCCATTCACCCAGGATAAGAGGACTCAAACGGCTGTTAATGCCACTCTCTCCGCTCTTAATGCCTACATCGAAACTTCGTCTGTGAATGAAATTAACGACGACCGCCGACGAGGGACCGTCCAATTCAATGTGGTGGTCTCGGCTCGTGTCGGGTTCCGAGCGGGTTGGTGGAGGACCAGGAGACGATTGCTTAGGGTTCTGTGCGAGGACCTGTCGGTTGGCCTGTCGTCGTCGAATAGCAGCACTTCCGATTCAAGGTTTGGTGATGCTGTCTCTAGGCCATGGACAGAAGAGAGAACACAGGGGTTTATTAGCTCTCTGAACAAAACTTCCCCAGATGTGAGATTGATTGTTCTAACAGTAACAGCCCACGAGTTTGAGTTAGAACGTAGGGATGGTGGTGTTTACCACTGGTGCCAAGCAATATAG MADPSRPVTGYPAYPNGRPPSSNSQPHGQAYPYAAPPYSYPTQYANPYDSTHQNARLSFLRAIIAGIIVVFIITAIILFIIWLVLRPQLPEFRVDSFQVTNFSAASQSLSALWFVGFSVFNPNKKMTISYDIVEPTVFYKNEFLSQTRVPPFTQDKRTQTAVNATLSALNAYIETSSVNEINDDRRRGTVQFNVVVSARVGFRAGWWRTRRRLLRVLCEDLSVGLSSSNSSTSDSRFGDAVSRPWTEERTQGFISSLNKTSPDVRLIVLTVTAHEFELERRDGGVYHWCQAI Homology
BLAST of Csor.00g128910 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.1e-11 Identity = 44/213 (20.66%), Postives = 105/213 (49.30%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10 Identity = 57/212 (26.89%), Postives = 95/212 (44.81%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.8e-06 Identity = 37/147 (25.17%), Postives = 69/147 (46.94%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.0e-05 Identity = 40/159 (25.16%), Postives = 77/159 (48.43%), Query Frame = 0
BLAST of Csor.00g128910 vs. NCBI nr
Match: KAG6570467.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 573 bits (1478), Expect = 3.84e-206 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
BLAST of Csor.00g128910 vs. NCBI nr
Match: KAG7010333.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 498 bits (1283), Expect = 2.85e-173 Identity = 260/274 (94.89%), Postives = 262/274 (95.62%), Query Frame = 0
BLAST of Csor.00g128910 vs. NCBI nr
Match: XP_023512211.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449 bits (1155), Expect = 1.24e-157 Identity = 232/239 (97.07%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of Csor.00g128910 vs. NCBI nr
Match: XP_022986421.1 (uncharacterized protein At1g08160 [Cucurbita maxima]) HSP 1 Score: 447 bits (1149), Expect = 1.01e-156 Identity = 231/239 (96.65%), Postives = 232/239 (97.07%), Query Frame = 0
BLAST of Csor.00g128910 vs. NCBI nr
Match: XP_022943707.1 (uncharacterized protein At1g08160-like [Cucurbita moschata]) HSP 1 Score: 446 bits (1147), Expect = 2.04e-156 Identity = 231/239 (96.65%), Postives = 232/239 (97.07%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy TrEMBL
Match: A0A6J1JB26 (uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111484172 PE=4 SV=1) HSP 1 Score: 447 bits (1149), Expect = 4.91e-157 Identity = 231/239 (96.65%), Postives = 232/239 (97.07%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy TrEMBL
Match: A0A6J1FTS7 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111448377 PE=4 SV=1) HSP 1 Score: 446 bits (1147), Expect = 9.89e-157 Identity = 231/239 (96.65%), Postives = 232/239 (97.07%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy TrEMBL
Match: A0A6J1H136 (NDR1/HIN1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111459189 PE=4 SV=1) HSP 1 Score: 400 bits (1027), Expect = 1.85e-138 Identity = 203/242 (83.88%), Postives = 219/242 (90.50%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy TrEMBL
Match: A0A5D3BCX0 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00270 PE=4 SV=1) HSP 1 Score: 399 bits (1025), Expect = 3.87e-138 Identity = 202/241 (83.82%), Postives = 221/241 (91.70%), Query Frame = 0
BLAST of Csor.00g128910 vs. ExPASy TrEMBL
Match: A0A1S3BN15 (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103491430 PE=4 SV=1) HSP 1 Score: 399 bits (1025), Expect = 3.87e-138 Identity = 202/241 (83.82%), Postives = 221/241 (91.70%), Query Frame = 0
BLAST of Csor.00g128910 vs. TAIR 10
Match: AT2G27260.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 146.0 bits (367), Expect = 4.8e-35 Identity = 87/230 (37.83%), Postives = 131/230 (56.96%), Query Frame = 0
BLAST of Csor.00g128910 vs. TAIR 10
Match: AT3G52460.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 105.1 bits (261), Expect = 9.4e-23 Identity = 78/231 (33.77%), Postives = 118/231 (51.08%), Query Frame = 0
BLAST of Csor.00g128910 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 79.3 bits (194), Expect = 5.5e-15 Identity = 51/181 (28.18%), Postives = 90/181 (49.72%), Query Frame = 0
BLAST of Csor.00g128910 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12 Identity = 44/213 (20.66%), Postives = 105/213 (49.30%), Query Frame = 0
BLAST of Csor.00g128910 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 68.9 bits (167), Expect = 7.5e-12 Identity = 57/212 (26.89%), Postives = 95/212 (44.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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