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Csor.00g128850 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGGTGAGGGTCTTCGTAACAGTGCCGATGGAGCTTCTGCTCTTGCTAATGGCGCTGATGCTTCACTCTGAAGCTGTGAATACGAACAATGTATACCAACCTTGTGCGGACACCAAGATTCAGAGGTCCGACGGATTCACCTTCGGAATCGCTTTCTCTTCCAGGGACTCATTCTTCTTTAACCAGTCCCATCAGCTCTCGCCGTGTGACCGTCGTCTTTCTCTGGCATCGCTCAACTCACAGCTTGCTGTTTTCAGACCTCGAGTAGACGAGATCTCCCTTCTCTCCGTCAATACTTCCGATTTCTTTCCGGTACAAACTCGATCTTGATTTCATGATTCGGATTATTTCGAATACTCACTCAGATCAGTGTAGTTTCTAATTTGGTCGAAGTTTTTATTCCGGTTTTCCTTCCATTTGTAGACGTTGGTAGAAGTAGGCTATATTCTTCTAGTTTTCACGTGGATTTAGCATAGGGATTCTTGATGTTACTTTATTCTTTGAATCGAACGGCCATCTTGTAACATCCTTTATTACTTGGTTGTATCTTTCCTATCTATGAAACAGTGTCTTGTCTCTCAATATCAGATTGCTTGGTATGAGTTTAAAAACTTGTTTGACTAAATGTGTAGATCGATAGTCTACTTGTTCTTCATCCTCGCTTCCCTCTCTTGGTTGGTTTTAACTTCTTAATATATGGCGCAATGTTTTGCTTCTCAGTGTGAGATTACTTGTTATGAATTTATTGTTTGATGAGACGTTCTCATGGAGACAATTAGATAGATAGAACCTTCATGTGATTCGTTCTTGCTTCCATCTCTTAGTCGGTTATAAGTTTGCAATCTATGCCACTGAGTCTTGTCTCTCAATGACCGGTTACTTGGTATGCTTATCAGATCTCGTTTGAGGAAATGTGTTCATAGAGGGGACTGGATAAATTGTACTCTCCACGTCTGTGCTTAGCAGATCAGTATTCATATGGCATTTATAGAATGATGAAGCTTTACAGTTATGTAATGGCCCCTGATTAATCAAATGTCGAATCTGACTTGAATGCATCCCTAATTGCTAAAGAAGATTTCCCTGCTTCTTAATGAAACATCACTATAAGTAATAGAAATAGCCATAATTCTTGATGCCTCGCTATTTCCAGGATACTTTTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAGTATGCTGCAAGGTCTCAGCCTGCCTTCGTCGCTAATGGCACATTCATAGTGACGAGTTTCACCCTGGTAAGATTTAAACTCTCTGCAAGTAGATGCTAGAGAAGTTGTAGGTTTTGTTAGAAATAAAATTAAGCTGATGAATTCACATAATCTAATGAATGAAATCGATTTTGGTGAGAGCAGGTACTTGAGTTTCAGAAGGGCAGGCTGCAGAACTTGTACTGGAAGAGAGATGGATGTGCTTCGTGCTCAGGCAAGTCCAGATCTAGTTATGTCTGCCTTAACAATCAGGATTGTGCCATCAGAACATCAAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTGACATTTTCAGGCACAGATAAGCATCTTGCAGCGCTAAACACCTGGTATGAAGTAAAAAACCTTCGACAATATTCCCTCTATAGTGTTTATTCAAATCTCATGGATTCTCTTACTGGCCAGTATAATAGGTTCTTCTAATTAGTTATTCATCATACTCCTCTCAAGGTCTGTCTGTTGGTCTATAACTTCTATACATTTTACTGTTTGTCATGGGCTCCCTGCTTGGCTTTGATATCCATCCTTTTGCGGCCCCCTTTGCTTTGTATGAGACATCCCATTTGAAAAAACTATTTGAACCAATATCTACCATTTAACATAAACTCCTGCTGCTTTGTTTTGGGAAATGCTTACTGAAATTATATGGGATATATTTGATTATGAATTCACAAGCGGTTTATGAAAATGTAAGTTGAGAACAAGAAATTTGTAACCGTCCAAGCCCACCGTTAGCAGATATTGTCTCTTTGAGCTTTCCCTTTTGGGTTTTCCTTCAAAGTTTTTAAAATGCATCAGGTAGGTTGATGTTTTCACACCCTTATAAAGATTGTTTCGTTCTCCTTCCCAACCAACGTAGGATCTCACAAAATTGATCGAGGTTTTTAAGGAGTGTTTGTGGCCTATTCTTAAATAAAAAGATTATTTTGGTGGAGAACAACTAAAAGTTTGTTTTTGTGTTCTCAAACTTATACATTTGCTATATATTTCCTCTTCCATCTTTTTCTCTCTGCCATTTTTCAATCTTGTAGTGTATTAAGTTGATTGGTTTTGAAGGCTATCTCAGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTGCCTGTTTTGATTTGCATTGA ATGGCGACGGTGAGGGTCTTCGTAACAGTGCCGATGGAGCTTCTGCTCTTGCTAATGGCGCTGATGCTTCACTCTGAAGCTGTGAATACGAACAATGTATACCAACCTTGTGCGGACACCAAGATTCAGAGGTCCGACGGATTCACCTTCGGAATCGCTTTCTCTTCCAGGGACTCATTCTTCTTTAACCAGTCCCATCAGCTCTCGCCGTGTGACCGTCGTCTTTCTCTGGCATCGCTCAACTCACAGCTTGCTGTTTTCAGACCTCGAGTAGACGAGATCTCCCTTCTCTCCGTCAATACTTCCGATTTCTTTCCGGATACTTTTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAGTATGCTGCAAGGTCTCAGCCTGCCTTCGTCGCTAATGGCACATTCATAGTGACGAGTTTCACCCTGGTACTTGAGTTTCAGAAGGGCAGGCTGCAGAACTTGTACTGGAAGAGAGATGGATGTGCTTCGTGCTCAGGCAAGTCCAGATCTAGTTATGTCTGCCTTAACAATCAGGATTGTGCCATCAGAACATCAAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTGACATTTTCAGGCACAGATAAGCATCTTGCAGCGCTAAACACCTGGCTATCTCAGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTGCCTGTTTTGATTTGCATTGA ATGGCGACGGTGAGGGTCTTCGTAACAGTGCCGATGGAGCTTCTGCTCTTGCTAATGGCGCTGATGCTTCACTCTGAAGCTGTGAATACGAACAATGTATACCAACCTTGTGCGGACACCAAGATTCAGAGGTCCGACGGATTCACCTTCGGAATCGCTTTCTCTTCCAGGGACTCATTCTTCTTTAACCAGTCCCATCAGCTCTCGCCGTGTGACCGTCGTCTTTCTCTGGCATCGCTCAACTCACAGCTTGCTGTTTTCAGACCTCGAGTAGACGAGATCTCCCTTCTCTCCGTCAATACTTCCGATTTCTTTCCGGATACTTTTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAGTATGCTGCAAGGTCTCAGCCTGCCTTCGTCGCTAATGGCACATTCATAGTGACGAGTTTCACCCTGGTACTTGAGTTTCAGAAGGGCAGGCTGCAGAACTTGTACTGGAAGAGAGATGGATGTGCTTCGTGCTCAGGCAAGTCCAGATCTAGTTATGTCTGCCTTAACAATCAGGATTGTGCCATCAGAACATCAAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAGCTGACATTTTCAGGCACAGATAAGCATCTTGCAGCGCTAAACACCTGGCTATCTCAGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACTTGCCTGTTTTGATTTGCATTGA MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWLSQFSSSSSSSSSSSSSSLACFDLH Homology
BLAST of Csor.00g128850 vs. NCBI nr
Match: KAG6570461.1 (hypothetical protein SDJN03_29376, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 468 bits (1204), Expect = 4.76e-166 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Csor.00g128850 vs. NCBI nr
Match: XP_022943561.1 (uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 uncharacterized protein LOC111484349 [Cucurbita maxima]) HSP 1 Score: 432 bits (1112), Expect = 6.02e-152 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Csor.00g128850 vs. NCBI nr
Match: KAG7010325.1 (hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 431 bits (1109), Expect = 1.72e-151 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Csor.00g128850 vs. NCBI nr
Match: XP_023511823.1 (uncharacterized protein LOC111776727 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 429 bits (1102), Expect = 2.01e-150 Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0
BLAST of Csor.00g128850 vs. NCBI nr
Match: XP_038900700.1 (uncharacterized protein LOC120087841 [Benincasa hispida]) HSP 1 Score: 410 bits (1054), Expect = 1.21e-142 Identity = 203/216 (93.98%), Postives = 210/216 (97.22%), Query Frame = 0
BLAST of Csor.00g128850 vs. ExPASy TrEMBL
Match: A0A6J1JBU3 (uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349 PE=4 SV=1) HSP 1 Score: 432 bits (1112), Expect = 2.91e-152 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Csor.00g128850 vs. ExPASy TrEMBL
Match: A0A6J1FS19 (uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC111448296 PE=4 SV=1) HSP 1 Score: 432 bits (1112), Expect = 2.91e-152 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Csor.00g128850 vs. ExPASy TrEMBL
Match: A0A6J1DHN7 (uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020583 PE=4 SV=1) HSP 1 Score: 407 bits (1047), Expect = 2.34e-142 Identity = 200/217 (92.17%), Postives = 211/217 (97.24%), Query Frame = 0
BLAST of Csor.00g128850 vs. ExPASy TrEMBL
Match: A0A1S3BNB9 (uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=4 SV=1) HSP 1 Score: 407 bits (1045), Expect = 5.25e-142 Identity = 204/220 (92.73%), Postives = 212/220 (96.36%), Query Frame = 0
BLAST of Csor.00g128850 vs. ExPASy TrEMBL
Match: A0A5A7V4B1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001120 PE=4 SV=1) HSP 1 Score: 403 bits (1035), Expect = 7.42e-141 Identity = 203/218 (93.12%), Postives = 210/218 (96.33%), Query Frame = 0
BLAST of Csor.00g128850 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 310.1 bits (793), Expect = 1.6e-84 Identity = 156/210 (74.29%), Postives = 175/210 (83.33%), Query Frame = 0
BLAST of Csor.00g128850 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 245.0 bits (624), Expect = 6.3e-65 Identity = 127/213 (59.62%), Postives = 159/213 (74.65%), Query Frame = 0
BLAST of Csor.00g128850 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein ) HSP 1 Score: 220.7 bits (561), Expect = 1.3e-57 Identity = 122/239 (51.05%), Postives = 164/239 (68.62%), Query Frame = 0
BLAST of Csor.00g128850 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 2.5e-13 Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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