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Csor.00g128830 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTATATACTTCTCCCATGCAAAGAATTTCTGCACTGAGAAATATGCTTGTTTAAACATAGGTCAAGGGGGTGATCTCAGAAGATCATACTTTCAAGGTCAGAGACCAAATCCAAAATTGGTTCTTGAGAAAGGAAGCAACAGCGATCTCAGATTTCAATCCCATGGAAAAAACATGGAAAGTAGGTTTGGAGATGGCCTGCTGCCACAGAATTTTGACGGTCTCGAGCAGAAATTCATTGATGACATCATTAACTTTTCCAAGGAACAAAGTGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGGTATATTTGCACATTCCTATTTCAGTACTTGCATTCTCGTTTTTCACATCATCTTTACTGAACATTCTTCATTTTGATGCATATCTTCAGAGAATTATCGCTATCAATTCTCAGTACGAGGAGCAATTAGCAGCGCTTCGAGCTCAGCATGCTGGTCGTCGTGATGAGCTGCTACGAAGGGAATCAAGTGCACGGCACCATCAGTATCAGAAGGGAATAAGGGACCATTACCCAAATGGGGGCATTGGCCCAGGTAATCCTCGTGGCAGTAGTGGAGTTACAACCTTAGCTGCTTCTGGAAGAGCACATCAAAATTATGAATCTGAACACTTCAATTCCTACAGAGAATGAACTCGGTTTCTTGGGAATTCTGCGCGGAATTCTAATTTGGATTCGAGTTTATGACACTGGCTCACGGTACTACTAATCAAACTTGCTTAATTTTCAGTATAAAATTACGCATTTTTACATTGTCCGATTAGGCTTCCTTAACAAACCTTTAAGTTGCCTTTTCATCCTAAAGTTATGCACTTTTCTGTTGCACACCCTTCTCTATAGAGCCCATGATCTATGGTATCTCTGGATCCCAGTTTTTGCCGACTAGAACAAATCAATGTTTAAGTTGTAGGATCCTCGAATTTTTAGGAGCTTTGGAGTTGGAGATAGTGGCTTACCATGATCTGATTGACGAGCTTGTATCGGAATTACGTTGCTACTTTATATAAAAGCTTCTTTAATGCTTTACATAAAAGTTTTCTTTATGTGAATTTGCTTGGTTTCCTTTCCTCACTGGTTCACACTCTCTTGATTTGCGGACTCCAACTGTTAATAATATATATATATATATATATATATATATATATCTTGCGGTAGAACTGATTAAACTTATTATTTAATATAAAGTTGTCTTTTAATCCTCGTTCAAGACTATATTCAATGTACTAGTTTATAAATGAGGTATTTTTCTGTGTGATGATGTAACAGTCTAAGCCCACCGTTAGCAGATATTGTTATCTTTGGACTTCCCCTCAAAATTTTTAAATCACGTTTGCTAGGGAGAAGTTTCCACACCATTATAAAGATTGATTTGTTTCCCTCTCCAACCGATGTAAGATCTCACAGATGATCTTAATCTTCATTTAAACAAAAAATCATGTTATCCATAAGCGATTAGAACACTCATACTTTTGCCCTTTCTACCAGCTTAGCAACTTGAGTATTGTACAATCCAGTAGTTAATACATTTATACTCCTATTGTGACCAGAAGTATAAAGATGGTGTAAAAGAATATGCATATATACGTGAGTTTCTTTTCAGGAAAGCATTTATTCAATGTATAATGCTTTGTTTTCTTATAAATATTCTTTGGTGGTTACTTTAGGTTAGGTTCCAATGGCAACATCACGTGGCATGTGAGCACATATCCATTGCCTCCAGATCTTGACCAGCAATTGCAATACGGTGGTCTCACTTTTCTGTCTCTCTTCTTTTGTGTTATTATTATCAATGATATCTGTTAG ATGTTTATATACTTCTCCCATGCAAAGAATTTCTGCACTGAGAAATATGCTTGTTTAAACATAGGTCAAGGGGGTGATCTCAGAAGATCATACTTTCAAGGTCAGAGACCAAATCCAAAATTGGTTCTTGAGAAAGGAAGCAACAGCGATCTCAGATTTCAATCCCATGGAAAAAACATGGAAAGTAGGTTTGGAGATGGCCTGCTGCCACAGAATTTTGACGGTCTCGAGCAGAAATTCATTGATGACATCATTAACTTTTCCAAGGAACAAAGTGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGAGAATTATCGCTATCAATTCTCAGTACGAGGAGCAATTAGCAGCGCTTCGAGCTCAGCATGCTGGTCGTCGTGATGAGCTGCTACGAAGGGAATCAAGTGCACGGCACCATCAGTATCAGAAGGGAATAAGGGACCATTACCCAAATGGGGGCATTGGCCCAGAGAATGAACTCGGTTTCTTGGGAATTCTGCGCGGAATTCTAATTTGGATTCGAGTTTATGACACTGGCTCACGGTTAGGTTCCAATGGCAACATCACGTGGCATGTGAGCACATATCCATTGCCTCCAGATCTTGACCAGCAATTGCAATACGGTGGTCTCACTTTTCTGTCTCTCTTCTTTTGTGTTATTATTATCAATGATATCTGTTAG ATGTTTATATACTTCTCCCATGCAAAGAATTTCTGCACTGAGAAATATGCTTGTTTAAACATAGGTCAAGGGGGTGATCTCAGAAGATCATACTTTCAAGGTCAGAGACCAAATCCAAAATTGGTTCTTGAGAAAGGAAGCAACAGCGATCTCAGATTTCAATCCCATGGAAAAAACATGGAAAGTAGGTTTGGAGATGGCCTGCTGCCACAGAATTTTGACGGTCTCGAGCAGAAATTCATTGATGACATCATTAACTTTTCCAAGGAACAAAGTGATGCAGAGGATGAGGAAAATGCTCGACATAGAGAGAGAATTATCGCTATCAATTCTCAGTACGAGGAGCAATTAGCAGCGCTTCGAGCTCAGCATGCTGGTCGTCGTGATGAGCTGCTACGAAGGGAATCAAGTGCACGGCACCATCAGTATCAGAAGGGAATAAGGGACCATTACCCAAATGGGGGCATTGGCCCAGAGAATGAACTCGGTTTCTTGGGAATTCTGCGCGGAATTCTAATTTGGATTCGAGTTTATGACACTGGCTCACGGTTAGGTTCCAATGGCAACATCACGTGGCATGTGAGCACATATCCATTGCCTCCAGATCTTGACCAGCAATTGCAATACGGTGGTCTCACTTTTCTGTCTCTCTTCTTTTGTGTTATTATTATCAATGATATCTGTTAG MFIYFSHAKNFCTEKYACLNIGQGGDLRRSYFQGQRPNPKLVLEKGSNSDLRFQSHGKNMESRFGDGLLPQNFDGLEQKFIDDIINFSKEQSDAEDEENARHRERIIAINSQYEEQLAALRAQHAGRRDELLRRESSARHHQYQKGIRDHYPNGGIGPENELGFLGILRGILIWIRVYDTGSRLGSNGNITWHVSTYPLPPDLDQQLQYGGLTFLSLFFCVIIINDIC Homology
BLAST of Csor.00g128830 vs. NCBI nr
Match: KAG6570459.1 (hypothetical protein SDJN03_29374, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 469 bits (1206), Expect = 8.01e-167 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of Csor.00g128830 vs. NCBI nr
Match: KAG7010322.1 (hypothetical protein SDJN02_27115, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 310 bits (795), Expect = 2.53e-104 Identity = 161/197 (81.73%), Postives = 162/197 (82.23%), Query Frame = 0
BLAST of Csor.00g128830 vs. NCBI nr
Match: XP_022943334.1 (uncharacterized protein LOC111448131 [Cucurbita moschata] >XP_022943335.1 uncharacterized protein LOC111448131 [Cucurbita moschata]) HSP 1 Score: 283 bits (723), Expect = 3.18e-93 Identity = 141/148 (95.27%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Csor.00g128830 vs. NCBI nr
Match: XP_023512046.1 (uncharacterized protein LOC111776883 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 281 bits (720), Expect = 1.73e-92 Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Csor.00g128830 vs. NCBI nr
Match: XP_022986988.1 (uncharacterized protein LOC111484575 [Cucurbita maxima]) HSP 1 Score: 278 bits (711), Expect = 4.02e-91 Identity = 138/148 (93.24%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of Csor.00g128830 vs. ExPASy TrEMBL
Match: A0A6J1FXP5 (uncharacterized protein LOC111448131 OS=Cucurbita moschata OX=3662 GN=LOC111448131 PE=4 SV=1) HSP 1 Score: 283 bits (723), Expect = 1.54e-93 Identity = 141/148 (95.27%), Postives = 142/148 (95.95%), Query Frame = 0
BLAST of Csor.00g128830 vs. ExPASy TrEMBL
Match: A0A6J1JI55 (uncharacterized protein LOC111484575 OS=Cucurbita maxima OX=3661 GN=LOC111484575 PE=4 SV=1) HSP 1 Score: 278 bits (711), Expect = 1.95e-91 Identity = 138/148 (93.24%), Postives = 140/148 (94.59%), Query Frame = 0
BLAST of Csor.00g128830 vs. ExPASy TrEMBL
Match: A0A1S3BME9 (uncharacterized protein LOC103491440 OS=Cucumis melo OX=3656 GN=LOC103491440 PE=4 SV=1) HSP 1 Score: 262 bits (670), Expect = 3.14e-84 Identity = 142/214 (66.36%), Postives = 150/214 (70.09%), Query Frame = 0
BLAST of Csor.00g128830 vs. ExPASy TrEMBL
Match: A0A6J1DFR7 (uncharacterized protein LOC111020662 OS=Momordica charantia OX=3673 GN=LOC111020662 PE=4 SV=1) HSP 1 Score: 248 bits (634), Expect = 2.76e-79 Identity = 123/148 (83.11%), Postives = 133/148 (89.86%), Query Frame = 0
BLAST of Csor.00g128830 vs. ExPASy TrEMBL
Match: A0A6J1K145 (uncharacterized protein LOC111490759 OS=Cucurbita maxima OX=3661 GN=LOC111490759 PE=4 SV=1) HSP 1 Score: 245 bits (625), Expect = 6.37e-78 Identity = 123/148 (83.11%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Csor.00g128830 vs. TAIR 10
Match: AT5G22040.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24 Identity = 62/141 (43.97%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Csor.00g128830 vs. TAIR 10
Match: AT5G22040.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24 Identity = 62/141 (43.97%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Csor.00g128830 vs. TAIR 10
Match: AT5G22040.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. ) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24 Identity = 62/141 (43.97%), Postives = 92/141 (65.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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