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Csor.00g128810 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACTGGAGATGATGGCACCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAATACCATTTTAGCGGTACAAAACCTTCACCTTTCTATATATATATATATATATATGTTTTTGTTTTATGACTCTGTACAGTACTTTCGTTTTCAGCTGAAAAGACCAGCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACTTTAATTGTTCAGACTGTTGTAGGAGGAAAAAAGTGTTTATTTATGTATATATATGAAACTAAATCATGGGTTTTGTTCTTTTTACTGTTGGAATCTTGAACATGGTTACAAATTGTGAGATCTTTTGATATTTCACCATAAATCTGCTTAAAAAACTGTTTTTGAAGCATATTTTATGAGAATTTCCATCTGGGTTTCTTACTAAACCCTCAGATTTGTGCAAATTTTGCTTCCAAAATCCAAGAACATGAAGTGAAGACGTTCAAGATGTGAAGTGGATCCAATATTAGTAGCTAGGGTTCTTGAATTTTTGTTGACTGTTCTTAAAATTAGGTTTTGGTAACAGTAATTAATTACAATCCCCAGATCCTTCTTTCTCTCTCTGCTTTCTTTTATTAATATTTTAATCAGTTGAATTACGTTTAGATCCGATCGAAGCATTCTCGCATGCTAAGATCAAAAGCTTTTTTTCTCTTTACCTAATTTTCCTACGAAGGAAAGAGGTGTTTGGAGAGTGAAGCAACCCAACCCAACTCTGAATGGTTTGAGTCTCGACTCTATGGTTTTCGTTCCAGTCACGTCGTTTTCTCATCGTTCTAAATTTTCCATCTTTTATCATCTTGTTTGCGGTGGTGTCAGATCGGAAGTCAGTAAGAAACCACCATGGAAAAGGATGTTTAAAGAGAGAGAGAGAGAATTCATGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACCAAAGTTGTCTTTTGTTTAATCTCTTTCAGGTTTGGTTAATGTATGAATTAATGTTAAGTGTTCTGTCGGACAGGTAAGTGTTCCATGCAACAACATGTTCACACTGGTAACTGTGAGATGCGGCCATTGCTCAAATCTGCTGTCTGTTAACATGGGAGCTTCTCTTCAAGTTCTTCCTCCTCAAGATTCCCACCCGGTAATATATATATGAATCGTATGATATTGTCCACTCCTTTGAGTATAAGCTCTCATGGCTCTGTACTTTCTCAAGAAGTTTCATGTCAATAGAGAGAGTATTCTTTGATTATAAATATATTATTTATTTAATTAATTAAAAAGATATTTTGTTTGGTGATGTGTGTTAGGGTAATAAACAGCAGCAGGTGAGTGGTGGGGATTGGAGCAAGGACAGAGGCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCAAAATGCACTAAAATTGCCTCTCTTGATTCTGCTGAACGTGACCAACACAGAATCCCTCCTATTCGCCGTCAGTTTTCTCTCTATTATTTATTATTATTATTATTATTATATATATATATATATATATATATATATATATATATATATATATAATTTCGTTATGAATGTTCGTTTTTTAATAATTAAATACGAACGAACGAACAAAAAAAAAAAAAAACTAAAATTTGATATTGATTATGATTTGATTAAATTTTCAGAGAGGTAGATTGGGACATTAAATGAACTTGGTTACAAAATTAAATAGTTCACTTTTTAATTTATGCTCACATTTAAAAGATCACACGTTGGGACACATGTTTGTAAGGAGAACAAAACATTATGTGAAAATCTCTCTCTAACAAACATGTTTTAAAACAAACAATATTTAGTAACAATGAGCTCTAAATTTTGAAAATGTTCTTAATTTTGTGTCACTTCTGCTCTGGCAGATATACATCTCTAGACTTTGATAATGTTGATATAGGTAAGAACCACAACGGTTAAATGAAATTAATAGTGTGGTTTAGTTGGATGAGGTGTTAGATGCATACAGACGTGGACCCATCTAGGATGGTGACCATACATGCATAATAGAATTCGACCCATCGATATCATGGGCCATTCTTTGTATGCATGTATGTTAATTTGGTACGTACGTATGTATGTGTGTATATATGATATGTATGGGTTAGCCTTTCATTCATTTGTCATGTCATTGATTCATTGATTCATTGATTCCTCTGCTCCTTTGCACTTTTTTCATTCCTATTTAATCCCTCATGTTTAATAGTATAATATAATGGGTTTGGATGTTGGCAGCACCAGAGAAGAAACAGCGTGTTCCTTCAGCATATAATAGGTTCATCAAGTAAGTTGATGCCTTAATTAGTTTGGGATTAGTGGTCTTAATTAACCTTAATTAATGGGTTTAAGTGTTTTGTTTTGTAGAGAGGAAATCCAAAGGATTAAGGCGAACAATCCCGACATTAGCCACAGAGAAGCCTTTAGCACCGCCGCTAAAAATGTAAGTTCTCGAACCTCTTGCTCTTGCTCGAAACTAAGATCCGAGTTTAAAGCTTTTGAGACATATATAGAAAGGTCTTTGATTAGACGTACGTGACGATACGAGAAGAGTTGTAATCAAGATGAAATTGACGACCGTAATTCTAGTTTTAGACGTAAATTTTTTTTTTTTTTAATCTTTTTTAAGGAAATATAATTACTGGTTGATTAGGGATTAAAATGGGTAATTAAATGATTAATCCATCTAATTAGTGGGTGGTTTGATTATGCAGTGGGCACATTATCCTCACATCCGTTGTGGGCAGAAGGTGGATGGAAACAAGCAAACAAAATAA ATGTCACTGGAGATGATGGCACCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAATACCATTTTAGCGGTAAGTGTTCCATGCAACAACATGTTCACACTGGTAACTGTGAGATGCGGCCATTGCTCAAATCTGCTGTCTGTTAACATGGGAGCTTCTCTTCAAGTTCTTCCTCCTCAAGATTCCCACCCGGGTAATAAACAGCAGCAGGTGAGTGGTGGGGATTGGAGCAAGGACAGAGGCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCAAAATGCACTAAAATTGCCTCTCTTGATTCTGCTGAACGTGACCAACACAGAATCCCTCCTATTCGCCCACCAGAGAAGAAACAGCGTGTTCCTTCAGCATATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCGAACAATCCCGACATTAGCCACAGAGAAGCCTTTAGCACCGCCGCTAAAAATTGGGCACATTATCCTCACATCCGTTGTGGGCAGAAGGTGGATGGAAACAAGCAAACAAAATAA ATGTCACTGGAGATGATGGCACCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAATACCATTTTAGCGGTAAGTGTTCCATGCAACAACATGTTCACACTGGTAACTGTGAGATGCGGCCATTGCTCAAATCTGCTGTCTGTTAACATGGGAGCTTCTCTTCAAGTTCTTCCTCCTCAAGATTCCCACCCGGGTAATAAACAGCAGCAGGTGAGTGGTGGGGATTGGAGCAAGGACAGAGGCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCAAAATGCACTAAAATTGCCTCTCTTGATTCTGCTGAACGTGACCAACACAGAATCCCTCCTATTCGCCCACCAGAGAAGAAACAGCGTGTTCCTTCAGCATATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCGAACAATCCCGACATTAGCCACAGAGAAGCCTTTAGCACCGCCGCTAAAAATTGGGCACATTATCCTCACATCCGTTGTGGGCAGAAGGTGGATGGAAACAAGCAAACAAAATAA MSLEMMAPERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASLQVLPPQDSHPGNKQQQVSGGDWSKDRGSSSSSSSSSSSKCTKIASLDSAERDQHRIPPIRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCGQKVDGNKQTK Homology
BLAST of Csor.00g128810 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47 Identity = 108/173 (62.43%), Postives = 129/173 (74.57%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43 Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.1e-42 Identity = 95/161 (59.01%), Postives = 113/161 (70.19%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41 Identity = 99/176 (56.25%), Postives = 118/176 (67.05%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.6e-36 Identity = 92/182 (50.55%), Postives = 116/182 (63.74%), Query Frame = 0
BLAST of Csor.00g128810 vs. NCBI nr
Match: KAG6570457.1 (putative axial regulator YABBY 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 357 bits (917), Expect = 1.89e-124 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Csor.00g128810 vs. NCBI nr
Match: XP_022943971.1 (putative axial regulator YABBY 2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 352 bits (903), Expect = 2.48e-122 Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of Csor.00g128810 vs. NCBI nr
Match: XP_023512204.1 (putative axial regulator YABBY 2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 345 bits (885), Expect = 1.38e-119 Identity = 174/177 (98.31%), Postives = 174/177 (98.31%), Query Frame = 0
BLAST of Csor.00g128810 vs. NCBI nr
Match: XP_022986990.1 (putative axial regulator YABBY 2 isoform X2 [Cucurbita maxima]) HSP 1 Score: 345 bits (884), Expect = 1.96e-119 Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0
BLAST of Csor.00g128810 vs. NCBI nr
Match: XP_022943973.1 (putative axial regulator YABBY 2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 341 bits (875), Expect = 4.31e-118 Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy TrEMBL
Match: A0A6J1FT58 (putative axial regulator YABBY 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448539 PE=3 SV=1) HSP 1 Score: 352 bits (903), Expect = 1.20e-122 Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy TrEMBL
Match: A0A6J1JFK2 (putative axial regulator YABBY 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484576 PE=3 SV=1) HSP 1 Score: 345 bits (884), Expect = 9.50e-120 Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy TrEMBL
Match: A0A6J1FXJ5 (putative axial regulator YABBY 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448539 PE=3 SV=1) HSP 1 Score: 341 bits (875), Expect = 2.09e-118 Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy TrEMBL
Match: A0A6J1FVQ9 (putative axial regulator YABBY 2 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111448539 PE=3 SV=1) HSP 1 Score: 301 bits (770), Expect = 1.03e-102 Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Csor.00g128810 vs. ExPASy TrEMBL
Match: A0A6J1JHL4 (putative axial regulator YABBY 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484576 PE=3 SV=1) HSP 1 Score: 298 bits (762), Expect = 3.91e-101 Identity = 153/157 (97.45%), Postives = 154/157 (98.09%), Query Frame = 0
BLAST of Csor.00g128810 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 190.7 bits (483), Expect = 1.0e-48 Identity = 108/173 (62.43%), Postives = 129/173 (74.57%), Query Frame = 0
BLAST of Csor.00g128810 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 177.6 bits (449), Expect = 9.1e-45 Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 0
BLAST of Csor.00g128810 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 177.6 bits (449), Expect = 9.1e-45 Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 0
BLAST of Csor.00g128810 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 153.3 bits (386), Expect = 1.8e-37 Identity = 92/182 (50.55%), Postives = 116/182 (63.74%), Query Frame = 0
BLAST of Csor.00g128810 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 141.4 bits (355), Expect = 7.2e-34 Identity = 91/184 (49.46%), Postives = 112/184 (60.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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