Csor.00g128280 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g128280
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Regulator of chromosome condensation (RCC1) family protein
Location	Csor_Chr07: 7340490 .. 7351081 (+)
RNA-Seq Expression	Csor.00g128280
Synteny	Csor.00g128280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAGGTGGTGATGGAAGCGACTTCTCCTGTTCGTCGTGTTCTTTTCATCTCTGCCGGTGCTAGCCACTCGGTTGCTCTTCTTTGTAAGCTACTTCGATTTTTCTCTTCAATTTCCTTGCTATTGTTCTGGTAGATCAATGTGCGGTGCTGACAAAGAAGATTTTGATCTGTTTATTTCTAAGATAATGATGAAAATGGGTTAAGTGAGGCACCGTCGTTCTATGATGATGTGTGAGTTTGTTCATCGGGCGTTGGTTGACTTCGAATAGCTATTGTTGTTCTTGATAGGGTTAGATCTTTTTGGATACTGATTCTTCTTGGGTTTGTGGGTCTCTGTTGTTTAGGTTCAATGCCTCATTTTGGGCGTTGATATCAAATGGTTTTTGTAATTTCTTACGAGGATTAGTGTTTTAGATCGAATCCCTTTTTGTAATGATAGTTTGTACTTTGTTTTGGCACTTTTGATTCGTTTTTTAATGCATTTTTTGTGTTATTTTGTTTCTTCCCATGAAAGTTTCATTTTCTATATGATTTTCTTTGAAACTTGTGCAATGTGTTACAATGTCTTGAATATCAAAAGTGACAGAATGTATCTTCACTTTTGGATAAGAAATGGAGCTTTTATGTTCAGAGGCATACAAAAACAAGCCCATAAAAGAATCCCAAAACTAAATATAAGAACGGACTCCGATCCGGTTAAATTACTAAGTTGGTCTATGTGGTTTCGAAAAAGTTAGGAATTTAGTCCCTATGGTTTTAAATGTCAGAATTAGTCCGTATTGTTTGATAAAATCCTCACATAGACTAAACGTTTATTCTCCATGTCACACATGACTTTCCATTCACAATGTTGTTTTAGTTCGGAGCTAATTTACAATGACGGTATCTCCTTTTCGTAATTTCATATCAACTAGGCAATGTTTTTGTTTGCTGTAACAAGAAAGGTTTGCAGTCACATTTAACCATTGGTCATGGATATTAATCGTTCTTTGGATGGTGTGCAGCTGGAAATGTTGTTTGTTCTTGGGGTCGTGGAGAAGATGGTCAATTAGGTCATGGAGATGCTGAAGATCGACTTTCACCGACCCAATTGAGTGCATTGGATGGCCATGAAATAATATCCGTTACTTGTGGAGCTGATCATACAATAGCTTATTCTGAAGCATGTACAGAAGTTTATAGTTGGGGATGGTAAGTGACTACACTTCGGCACTCACTTTTATAGTGTCCTATTTACTTACTAGAATATTTACGATATACAATCTCTACATAAAGTCAATAGTTTATGGGGAAAGAATAACCTTAATTTAAGGAATATTGGTGTAATTCTTCAGGATTTCGTTAGTTTTTTTTGTATTATAAAAGGTCATCTAGGAAATCGTACATCTCGATTGACGTGACATTTACCAAGCATAAACCTTTCTTCTCCGAAGCCTCTATTCCGGGGGAGAAAGTTGTAGTTGAAGAGAGTCCTTAGGAAATAGTGGATCCCTTGGACACTCTAAATCCAACCATTGAGTCCACTCCTACTACAGATTCTAGCCAAAATTCAGTCACAATAGAGTCACATACTGAACCATCCAATCCACCTTCACTTAAGTTCTCTAACCTGCCACTGACTTAAGTTTCCTTATAAGGCCAAGTTCCCATGTAGGTATGGCTGATGCATGAAACACTGGCTTAACGTACTTCTTTTATGGAGAGAAAAATAAATATTGTGAAGAAGAGATCTAAACAAAACACACCAGACTTTATATCCAAGGATTTGATTCAACCTTATTGCCAAGACCAATTTTACTCATTGAAGAAAAAATCAGTCGCTTTTGGAGACATATATCATTGTATTAATTGAAATAGTTTAAAACCTATAAAGAATCACTCTGACTGGGTCTTCATAAACATTTTAAGTACACTAAATCAATACTTTTAAACTTTTCCTGACCTCCTTTGGATTTAGTTTTGTGGGGGGTACTTCGAATTTGGGTCCTTCTTTAAGTTGGTGAAGTCGCTACGTTTTAATACTATTGCTAAGATGTATCTTATTGACTATTTTCTTTAACTTGATTTCCAGGGGTGACTTTGGGAGGTTAGGTCATGGTAATTCTAGTGATCTGTTCACACCAAAGCCAATTAAAGCATTACATGGTCTTAGGATAAGGCAAATTGCTTGTGGAGATAGCCACTGCTTGGCGGTTACTATGGAAGGCGAGGTGCAGAGGTTGGTAGTATTTTCCCAATCCTTATAGACTTTATTTTATCAATTATCTCAAGGTAATCATTTTTGTGTAACTCGACCTTTTTGACAGTTTTGGGGTGTATTATGATGATTATTATTTTCCTTTTTGTGATAGTTAATTATGGTCTAGTTTGACAAATTAAAAAAATGTAATTTTGTGCAGCGACATTATGATAAACGCTAACTTCAACGTTCTTGACCCCCTCATTTTTGGACTGGTTTTTCGGATGCCATTGTGTTCTTTCATTTACCAATGAGAGCTTGATGTTGAATCGTAATAGTTATGCCATTTGATCATGAAGGTATTTTGAGATAAGGGAGAGACCGTTTCATTCGGTATAATATTTGGCTCGAGAGGTAAAGGGGAATGTTTAGAGGTTTCGAGAGTTCTTAGAGGAGGAAGTACGGGATTTGGGTAGGTTTAATGTCTCATGTTTCGGTGTATGGCTTAAGGAATTTTAGAATCGTATATCATCTCTTATTATTTACAAAATTGATCCTTTTTTTGTAATATCCAATTTTGTCCCCTTATATTGGTTTATTTAGTAGTGGATTTTTTTTTTGTTCTCGCTTTTGTGTTCTTTTATTTGTATAGACCAACCTTTTATTTCATCACGAAAAGGCGGCGAAATTTTTTTTTTTGTCAGTGCACATTCTGAAGCTTTGTTTAAGGTCAAGTTACACCGTGATCGCAATTGGAGATATTTAGTCTTTATATGACTTACTTATCTGTTTTCTTAATTTATTTCCGCATATTTATATCTTATTTTAATACTTTATAGTATATGGTTTACTCTGTATTTGGTTGTATATGGATGAAGTTGGGGAAGGAATCAAAATGGTCAACTTGGTCTTGGTACCACTGAAGATGCTCTTGTGCCGCAGAAAATCCAAGCATTTCAGGTTAGTATCGTTTCGATTGCTATTTCAAAGGGATATTGTGCTTACAAATTTTACACTTTATCCTTGAATGCTTCTCGTGATCTACCGTTGTCGTTTTTATATCTAGATCAAGATATGTAAGCACGAAATATGTCATTGGATAATGAGATATGAAAAACGGTATTTGGACTAAGTTTTTAATGTGAAATCGTTCATTGGATATAACTCATTGACCTCGACCTCGACTGTATATTTTTAGTTCTTGAAGGATTAAGTTCATGCAAATTCTATGGAGTTACAAATTGATGGATCTTTATGTATTATTATTACTCTCACGTTAATAGCTTTTTTTATTATCAGCCTTTTGGTTAGGACTCCATGGGATTTTGGTGTTGTAAGGACCTCTTGTCCTCTCTTTTGTATCCTTTCTCTTTATTAATGAAAGAGGAATCCTCCCACAAAAAGTACAAACCATGGAGAAGATTATCGAGCTCCCGTGCTTTCCCCCAGGAACACTTTGGGGTGAACACCCATCCGAACAAGTAGGGTCAATAGTTTAGCATTTAGCAACAAAAAATCTTTAACCCAACAAGTGCTCTCCGAACCAAGCTAGATAGTTTCCTATCGCTAGGCTCACCAACCAACTTGGACTTTGATTTTTCTTATTCCTACTGAATATCAAAACCATAAGGATTGTTTCCAGCCATGAGTTCCCATATGACATAAGCGCTCTTGGGGCCATTCCTCTATCTCACTACCAATTAAGGCATACAAGCTCCCTTAGACCCACTCACATCTACTGATATTCCCTACTCCATGAACTCCCGTTGTTGAGTTACAAGTGGGCCTCCAACTAACTGACTCACATATACACATATACCTTAACTATTTCTCCCTTCTCTCTGATAAACAGCTAACTATGGCCTATCACCATCTGATCTCAGCATCTAAAATGATTTTAACATTTAAGCTTCTGATATTTAACAACTCGAGGATCGGTTTCTTTTAAGGGAGATAGAGCTGATGTCAGCTTGTTATTGGGTGCAATACTGAATTATAATATTTATTCTGTTATTTATTTTGTTTTCGACTTTTGGCTGTCTAGGATTAGTTTGCAGGTTCATTAAGTTTTATTGTAAGCGGAAGGTTAATTAGCTATTATAACTTAATTTCCATTTCTTAAAATATTCAACATTTTCTAATGATTAGAGAAATGTTAATTAGAAGATTACTGTGACCTTAGGAACAAAATATGCTTTGATGTTAAAATGAACCTTTTTTTCTAACTATAGTTATGATTTTTTTAAGAACTATAATAGGGTAACATATACCAAATTTGACTTGCTTGCCACTGCCATGATTATATTCATAGGCGCAACATTACAACCTCATGCATTCAAGCATCACATTCTGCATGCATTTTATGATCATTTGCAGCAGTTCATGTTCTCGCTGTATTGTTATATGAGTGGGAATTTGATTGTTATTTTTATTTATTTAGTGTATTCAAACTGTGATCTAATCCAATGCCTTTGTGATGCAAATTTGTTTATGAAATATTAAATATAATTTGAAGAACTCTTTCATTTTGTAATTTTTTTTTTCTTTCTAAAATTGACATTGTAACTAAACTTCTGTTGTAGGGAATATCCATAAAAATGGTAGCTGCAGGTGCTGAACATACCGCTGCTGTGACAGAAGATGGAGAGCTCTTTGGATGGGGCTGGGGTCGGTACGGAAACTTGGGATTAGGTGACCGAAATGATCGATTGGTGCCCCAGAAAGTTTCTTCTGTTGATGTATGTTGACAATTTTGCATTCTTTATCCTTTTTATCCCAATAAATATGATTTAAGGTTCCAATTAAGTGAATGATTAGTAATGCTTATCTGGTGACTATGGTCATTTTTTATTAATGCTTTGGGATTAACACTCCAAGCTAAGCAGGCTTCAATATGAAGCTCTCCTGATTGAGTCATAAAAAAAAAACTGCACCTTTTTGGTATAAGGATTAATTCTCAATCCTTTTAAGTTCTTCTTAACCATTATATTCTTAGGATGGGTCTTGTTCAAATGTGATCTCTGTTCATTCATGTACCCCTCCTTTACTCGGGCATCACATGCCCACCAACTTTTGTCTTAGTTCGTCCCCAAACTACATCCTACTAGGAGAGGTTTCACTCTGATACAATTTGTAATGCCTCATGCCCAAGATTCGAACTAGGATTTGGAATCTTGATTCCACACTTGATGGCCCCAACATTCTCATGCGACATGACTACGTTACCTACTTTTCTTCGGTTGCTTCTAACAGTGAAGACTATTCCAGAAACCAACTCATGTCCTTTTAACATGCTTTGTCTTCGCTCACATGTTTCGTAGGAAAATTCTTAAGACTTCATCCAACATAGGACTGCTCCTAGCTAAACACGCTTCACTATAAAGTTAGAAAGGTCTAAGTTGTTGGTATAAGTTGTAACGTTTAATCTTTTAGTTCTTTGTTGGCTGAAGATGAATTAAAATTTTGTTTAGAAGATCTTGTGAAGATTGATAATGGCTAAAGTGGTATAGAAGGCTCTGTTTGACTACATTTAATATTATATTTTTTTAGATAACATCACTCCATGCTTTCAAAATTTTAATTATTGAATTGAAAATGAAGGATAATAGTCATGGAAGGTTTTAGTTAATGAATTTTCTGACTTCTGAGATATCATGTAATCATAGAACCCCATAATTTAGAAGCATAAAAAGGAAGGCAGATCAGATGCTGAGAATAGGCCCTAAAATTCATTCCATGGGGAACTTGTAATTCATGATTTTTGTCGACTTATTCTTCTGTCTGCCTCGTGTACTATCTTGCAAAACTTACGTTGCAGGATGACAAGATGGTGATGGTTGCTTGTGGATGGCGGCACACTATATCAGTTTCCTCTTCGGGCGGATTATACACATATGGATGGAGCAAATATGGACAACTAGGACATGGAGATTTTGAGGATCGCCTCGTGCCTCACAGGCTAGAAGCGTTATGTGGGGATTCTATTTCTCAGGTGGCTTTTCTGCAGTTATTATATGTAGATCTCGTGTATGCATGTCTAATCGTACTAATCGTACTCTCAGGAGAATAAATTCTTGGGAACTCTACAGCGATTCTTCTCCTCCCTTAAGAAATTGATAGCATTAGTGTTTGAATTCTTTTCTTAATTGTGTAAGTAAAAAATTAGTAGCTTCCTTTGTATGATTATCGAGGGGTCGCCAGGAAGTTTTAGAGGTAGATTGAGGAGAGTATTAGTGCATTCGGAACATGTTTTTTTTTTTTTTTTTTTTTTTTTGACTGGAAAGAATGGTGCTGAAATGAAACTGATTTGAGTAAATTTCTTTGAGGATTCTTTTGCTGTGACATCTGATTTCATTAAGAATTATCAATTCTCATAATTTATTTTGACGCATTTACCTCTTTTCTTTTAATGGTTCTTTTTCAAAATTGTAAAAGCACTGTTGTCTTAAAAATTTCAGATATCAGGTGGTTGGAGGCATACAATGGCTCTTACAACTGATGGGAAACTTTACGGATGGGGCTGGAATAAGGTTTGTCGATTCTCCACTTGTTATCCGTTATAAATTTATAATTATGGTAAGTAGTTCGTTGATTTATGATTCCCCAAGCCCACCACTAACAAATGTTGTTTTCTTTGAACTTTCCCTTGTGGGCTTCCTCTCAAAGTTTTAAAACGCGTCTGTTAGGAAGAGATTTCCACACCTTTATATGAATGCTTCGTTCCTCTCTCAAACCGATGTGGGATCTCACAATCCACCCCCCTGGGGGTTCAACGTCCTTGTTGGTACACCGCCCGGTGTCTGGCTCTAATACCATTTATAACAACCTAAGCCTACCGCTATCCTATTTAGGCTTTCCCTTCTAGGCTTCCCCTTGAGATTTTAAAACGTAGGAAGAAGTTTCCACACCCTTATAAGGAATGATTCGTTCCCTTCTCCAACCAATGTGGGCGGCTCTCACAGAAAGAGACCAATATATGGAAGATTTCCATCTGTTCTATATATCAGAGGAGCTGAATATATTTAGGCAAACGTGAAAGCCCTAAACTAAGAATAATAAAATTACAAGAAAGACTAAAGATTAATATGCTCCTACATTCACACATATACCGTAACACTCCCCTCAAGCTGGAGGGTATATGTTAAGTATGCTCAACTTGTTTCAAAGGTGATCTATTCGAACTCGCCATTTAAAGATTTTGTTGAAACTTTTCTTGATTTTTCTACAGTTTTCATGTACTTTGTAGACAAAACCTTGATGTAGTTTCTCACTAACAAAATGAAATTATTGATGTTTGAAATTTACAAAAGAGATGTATTGTAACGACCTGATCTTTGATACCTCGAATAACAGGTCGTTACGTACACTCAAGGGTAAAAAGGGCGGTAAAATTTTCTTTTGTAAAACGGGAGACTCAAGGATTTTAAAATTTAAATATGCATTCAAAACCGACATATAAGTAGTTTAAAGGTAATATCCACGGAGGCAAATCAAAACTGTTTAAAAAAAATACATGAGTTTCGAGAAGTAGCATTTAAAATAATAGAAAAATGACAAGAAGGAAGAAGACTTATCTAAAAGGCACCCCTGCAGCTGCACGGCTCCAGTGCCCGCCATCAACAGTGGTTTACACTCCATCTAAAAAAAACAGAATAACATTCTAACGACCCAAATCCACCGCTAGCAGATATTGTCCTCTTTGGGATTTCGCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACCAGGGGAAGGTTTCCTCACCCTTATAAATGGTGGTCTGTTCTCTTCCCCAACCAATGTGGGACATCACAATCCACCCCCCTTCGGGGCCCAGCGTCCTCGCTGGCACTCTTTCCTTCCTCCAATCAATGTGGGACCACCCCCAAATCCACCCTCTTTGGGGCCCAGCGTTCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAGGCTAGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACGACCCAGATCCATCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTAGGGGAAGGTTTCCACACTCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTAGGACATCACAAACATAGAATGAGTATATACTTAGTAAGCAACTAACTTGTAGGCTCTTGTCAAACATAATCCTATACAGGGAAACTTAGACTATGTGCTCATAACTGTCCCTAGCAAACCAAACTGCGGCTTAACGTCTATACCAAACTTTGTAGGTTACTGTGTAACTACAATTCATATTAGCCTTGCTAACAAGGCTTGACTGAAAAGTAATTAACTAAAATTCATATTAGATTTCCTCTCCCTTGGAAAATAACTCAACCTCGAGTTAGGGGGACTAGCTGAAAAGCATCGGGTGCGTGATACTCAAATCAATTAGCGATTCTGAAGATGGGATTTATTTTTATAACTCATCACATAGGTCTACTCGATAAGCATCATCTACGTATATTCTTTGTACATTTCATATATTCATTAGATCTTTTTCTTGTTAAAAGAATTAATGGATAATGTGATGTGTCATGAAGAATTTGCATAATAAATTAAGGAAAACTAAGTTTGATACTTCTAAATAAATCCATGTTTAGACATAAATTTAATCGTTCTCGTGTCTCTCTCTTCGTGTACAGTTTGGGCAGGTTGGAGTTGGTGATAATGTTGATCATTGCTCTCCCAAGCAAATAAATTTCCCGTCAGATCAGGTATATACTTGTTTCTGAGCTTCTAGTAATTTTTTCAGCCTGTCATATATTTTTGTTATGTGAATATTTTCACCTTTATAAGTTAGGAGACATGATTAGCTCTTTGTTTGATATTTGATCTCCCTTGCTCTTTTAACAGAAAGTAATTCAGATCTCGTGTGGATGGAGGCATACACTGGCTGTTACTGATAAGCAAAATGTGTTTTCTTGGGGTAGAGGTACAAATGGGCAGCTTGGACATGGAGAGTCAGTGGACAGGTAATATATATGGCTGTTTGGACTGATATACATGTTCTGCAAAATGCTTATATTATTTCTTTTGCAGTATTCTTTTTAAGAACTTTGGTATTGCTTTTGTATGGATATCTTGCTTCAATTTTGTGACATCCCACATCGGTTGGGGAGGAGAACGAAACATTTTTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGTTTGAAAGGGAAAGCTCAAAAAGGAGGTTGAGCTCCGAAGGGGGTGGATATGAGGCGGTGTGCCAGCAAGAACGCTGGGCCCCGAAGGGGGGTGGATTGGGAGGTCCCACATCGATTGGAGAAGGGAATGAGTGCTAGCGAGGACGCTGGGCCCTGAAGGGGGGTTGATTGTGATATCTCACGTTGGGTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTACTTGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGAGGTTGAGCTCCGAAGGGGGTGGACATGAGGCGGTGTGCCAGCAAGGACGCTGGGCCCCGAAGGGGGTGGATTGGGAGGTCCCACATCGATTGGAGAAGGGAACGAGTGCCAGAGAGGACTGGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACGTTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAAACTCTCCCTAGCAGACACGTTTTAAAAACCTTAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTACCGGTGAGCTTGGGCCGTTACAAATTTTATCTTCCATTGTGATGTCCCACATTAGTTGGGGGGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACACATTTTAAAGCCTAAAGAGGACAATATCTGCTAGCGGTGGATTTGGGTCATTACATCCATTCCACTTATTTCATATAGCTTCTTTAAATGTTAGCTGAACTTTTGTTCGTGTTGTGCGTTTCTTTTTCCTGTATCTTATTTTCGTCTTGATGCAACCAAACATTAAGGGAGAATCTCCAACAATCTTTATAATTGAAAAAGTAAGCTAATTACAAGAGATTCATATAAAATCTCAGCTCTTATAAAACAAAAGTTTCATTTTTGACTTTGTAAGATACTGTAAGTTTCATGATATGCATGGCGGCTTAACTCTTTTGTGGATTTCCTTATTTGAATCTCTCCTTTTGCTTTAGCTGGATATCTTACCTTTGTTTTTTCAACTAGTCTACTTCAAGGTTGTCCATTAGAACTGATGATATCTGTTCTTTAATCAAAGGAACACACCGATGA

mRNA sequence

ATGACTGAGGTGGTGATGGAAGCGACTTCTCCTGTTCGTCGTGTTCTTTTCATCTCTGCCGGTGCTAGCCACTCGGTTGCTCTTCTTTCTGGAAATGTTGTTTGTTCTTGGGGTCGTGGAGAAGATGGTCAATTAGGTCATGGAGATGCTGAAGATCGACTTTCACCGACCCAATTGAGTGCATTGGATGGCCATGAAATAATATCCGTTACTTGTGGAGCTGATCATACAATAGCTTATTCTGAAGCATGTACAGAAGTTTATAGTTGGGGATGGGGTGACTTTGGGAGGTTAGGTCATGGTAATTCTAGTGATCTGTTCACACCAAAGCCAATTAAAGCATTACATGGTCTTAGGATAAGGCAAATTGCTTGTGGAGATAGCCACTGCTTGGCGGTTACTATGGAAGGCGAGGTGCAGAGTTGGGGAAGGAATCAAAATGGTCAACTTGGTCTTGGTACCACTGAAGATGCTCTTGTGCCGCAGAAAATCCAAGCATTTCAGGGAATATCCATAAAAATGGTAGCTGCAGGTGCTGAACATACCGCTGCTGTGACAGAAGATGGAGAGCTCTTTGGATGGGGCTGGGGTCGGTACGGAAACTTGGGATTAGGTGACCGAAATGATCGATTGGTGCCCCAGAAAGTTTCTTCTGTTGATGATGACAAGATGGTGATGGTTGCTTGTGGATGGCGGCACACTATATCAGTTTCCTCTTCGGGCGGATTATACACATATGGATGGAGCAAATATGGACAACTAGGACATGGAGATTTTGAGGATCGCCTCGTGCCTCACAGGCTAGAAGCGTTATGTGGGGATTCTATTTCTCAGATATCAGGTGGTTGGAGGCATACAATGGCTCTTACAACTGATGGGAAACTTTACGGATGGGGCTGGAATAAGTTTGGGCAGGTTGGAGTTGGTGATAATGTTGATCATTGCTCTCCCAAGCAAATAAATTTCCCGTCAGATCAGAAAGTAATTCAGATCTCCTTGGACATGGAGAGTCAGTGGACAGGAACACACCGATGA

Coding sequence (CDS)

ATGACTGAGGTGGTGATGGAAGCGACTTCTCCTGTTCGTCGTGTTCTTTTCATCTCTGCCGGTGCTAGCCACTCGGTTGCTCTTCTTTCTGGAAATGTTGTTTGTTCTTGGGGTCGTGGAGAAGATGGTCAATTAGGTCATGGAGATGCTGAAGATCGACTTTCACCGACCCAATTGAGTGCATTGGATGGCCATGAAATAATATCCGTTACTTGTGGAGCTGATCATACAATAGCTTATTCTGAAGCATGTACAGAAGTTTATAGTTGGGGATGGGGTGACTTTGGGAGGTTAGGTCATGGTAATTCTAGTGATCTGTTCACACCAAAGCCAATTAAAGCATTACATGGTCTTAGGATAAGGCAAATTGCTTGTGGAGATAGCCACTGCTTGGCGGTTACTATGGAAGGCGAGGTGCAGAGTTGGGGAAGGAATCAAAATGGTCAACTTGGTCTTGGTACCACTGAAGATGCTCTTGTGCCGCAGAAAATCCAAGCATTTCAGGGAATATCCATAAAAATGGTAGCTGCAGGTGCTGAACATACCGCTGCTGTGACAGAAGATGGAGAGCTCTTTGGATGGGGCTGGGGTCGGTACGGAAACTTGGGATTAGGTGACCGAAATGATCGATTGGTGCCCCAGAAAGTTTCTTCTGTTGATGATGACAAGATGGTGATGGTTGCTTGTGGATGGCGGCACACTATATCAGTTTCCTCTTCGGGCGGATTATACACATATGGATGGAGCAAATATGGACAACTAGGACATGGAGATTTTGAGGATCGCCTCGTGCCTCACAGGCTAGAAGCGTTATGTGGGGATTCTATTTCTCAGATATCAGGTGGTTGGAGGCATACAATGGCTCTTACAACTGATGGGAAACTTTACGGATGGGGCTGGAATAAGTTTGGGCAGGTTGGAGTTGGTGATAATGTTGATCATTGCTCTCCCAAGCAAATAAATTTCCCGTCAGATCAGAAAGTAATTCAGATCTCCTTGGACATGGAGAGTCAGTGGACAGGAACACACCGATGA

Protein sequence

MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGWNKFGQVGVGDNVDHCSPKQINFPSDQKVIQISLDMESQWTGTHR

Homology

[Close]

BLAST of Csor.00g128280 vs. ExPASy Swiss-Prot
Match: Q9FN03 (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 4.5e-170
Identity = 273/326 (83.74%), Postives = 300/326 (92.02%), Query Frame = 0


Query: 7   EATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 66
           E T+P R+VL ISAGASHSVALLSG++VCSWGRGEDGQLGHGDAEDR SPTQLSALDGH+
Sbjct: 9   EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68

Query: 67  IISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIACG 126
           I+SVTCGADHT+AYS++  EVYSWGWGDFGRLGHGNSSDLFTP PIKALHG+RI+QIACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 127 DSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAVT 186
           DSHCLAVTMEGEVQSWGRNQNGQLGLG TED+LVPQKIQAF+GI IKMVAAGAEHTAAVT
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188

Query: 187 EDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYTY 246
           EDG+L+GWGWGRYGNLGLGDR DRLVP++V+S   +KM MVACGWRHTISVS SG LYTY
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTY 248

Query: 247 GWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGWNKFGQV 306
           GWSKYGQLGHGD ED L+PH+LEAL    ISQISGGWRHTMALT+DGKLYGWGWNKFGQV
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV 308

Query: 307 GVGDNVDHCSPKQINFPSDQKVIQIS 333
           GVG+N+D CSP Q+ FP DQKV+Q+S
Sbjct: 309 GVGNNLDQCSPVQVRFPDDQKVVQVS 334

[Close]

BLAST of Csor.00g128280 vs. ExPASy Swiss-Prot
Match: Q5GLZ8 (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-56
Identity = 117/308 (37.99%), Postives = 179/308 (58.12%), Query Frame = 0


Query: 13  RRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTC 72
           +RV  +  G  H+V +L    V + G  + GQLGH   + R  P Q+ ALD   I++V+C
Sbjct: 34  KRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSC 93

Query: 73  GADHTIAYSEACTEVYSWGWGDFGRLG-HGNSSDLFTPKPIKALHGLRIRQIACGDSHCL 132
           G  HT+A ++   +VY+WG    G+LG  G+   +  P+ IK+L  ++I Q+ACG  H L
Sbjct: 94  GEAHTLALNDK-GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 153

Query: 133 AVTMEGEVQSWGRNQNGQLGLGT-TEDALVPQKIQAFQGISIKMVAAGAEHTAAVTEDGE 192
           A++   EV  WG+N+ GQLGLGT  +    PQ +++  GI    VAAG  H+  +T  G 
Sbjct: 154 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 213

Query: 193 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYTYGWSK 252
           +FGWG  ++G LGL D NDR VP  + S+   K+V + CG  HT +++  GG++T+G   
Sbjct: 214 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 273

Query: 253 YGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMA-LTTDGKLYGWGWNKFGQVGVG 312
           YGQLGH      + P ++  L G  +++I+ G +HT A + + G++Y +G    GQ+G G
Sbjct: 274 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 333

Query: 313 DNVDHCSP 318
              +  SP
Sbjct: 334 STSNRKSP 338

[Close]

BLAST of Csor.00g128280 vs. ExPASy Swiss-Prot
Match: Q5PQN1 (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc4 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-56
Identity = 117/308 (37.99%), Postives = 178/308 (57.79%), Query Frame = 0


Query: 13  RRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTC 72
           ++V  +  G  H+V +L    V + G  + GQLGH   + R  P Q+ ALD   I++V+C
Sbjct: 34  KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSC 93

Query: 73  GADHTIAYSEACTEVYSWGWGDFGRLG-HGNSSDLFTPKPIKALHGLRIRQIACGDSHCL 132
           G  HT+A ++   +VY+WG    G+LG  G+   +  P+ IK+L  ++I Q+ACG  H L
Sbjct: 94  GEAHTLALNDK-GQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 153

Query: 133 AVTMEGEVQSWGRNQNGQLGLG-TTEDALVPQKIQAFQGISIKMVAAGAEHTAAVTEDGE 192
           A++   EV  WG+N+ GQLGLG   +    PQ I++  GI    VAAG  H+  +T  G 
Sbjct: 154 ALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 213

Query: 193 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYTYGWSK 252
           +FGWG  ++G LGL D NDR VP  + S+   K+V + CG  HT +++  GG++T+G   
Sbjct: 214 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 273

Query: 253 YGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMA-LTTDGKLYGWGWNKFGQVGVG 312
           YGQLGH      + P ++  L G  ++QI+ G +HT A + + G++Y +G    GQ+G G
Sbjct: 274 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 333

Query: 313 DNVDHCSP 318
              +  SP
Sbjct: 334 STSNRKSP 338

[Close]

BLAST of Csor.00g128280 vs. ExPASy Swiss-Prot
Match: Q6PAV2 (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=1 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-56
Identity = 116/308 (37.66%), Postives = 177/308 (57.47%), Query Frame = 0


Query: 13  RRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTC 72
           ++V  +  G  H+V +L    V + G  + GQLGH   + R  P Q+ ALD   I++V C
Sbjct: 34  KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVAC 93

Query: 73  GADHTIAYSEACTEVYSWGWGDFGRLG-HGNSSDLFTPKPIKALHGLRIRQIACGDSHCL 132
           G  HT+A ++   +VY+WG    G+LG  G+   +  P+ IK+L  ++I Q+ACG  H L
Sbjct: 94  GEAHTLALNDK-GQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 153

Query: 133 AVTMEGEVQSWGRNQNGQLGLG-TTEDALVPQKIQAFQGISIKMVAAGAEHTAAVTEDGE 192
           A++   EV  WG+N+ GQLGLG   +    PQ I++  GI    VAAG  H+  +T  G 
Sbjct: 154 ALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 213

Query: 193 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYTYGWSK 252
           +FGWG  ++G LGL D NDR VP  + S+   K+V + CG  HT +++  GG++T+G   
Sbjct: 214 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 273

Query: 253 YGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMA-LTTDGKLYGWGWNKFGQVGVG 312
           YGQLGH      + P ++  L G  ++Q++ G +HT A + + G++Y +G    GQ+G G
Sbjct: 274 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 333

Query: 313 DNVDHCSP 318
              +  SP
Sbjct: 334 STSNRKSP 338

[Close]

BLAST of Csor.00g128280 vs. ExPASy Swiss-Prot
Match: Q15034 (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-54
Identity = 115/311 (36.98%), Postives = 175/311 (56.27%), Query Frame = 0


Query: 13  RRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTC 72
           R V  ++ G +HSV LL    V + G    GQLGH    +   P Q+ AL    II V C
Sbjct: 34  RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 93

Query: 73  GADHTIAYSEACTEVYSWGWGDFGRLGHGNSSD-LFTPKPIKALHGLRIRQIACGDSHCL 132
           G  H++A S+   +++SWG G  G+LG   + D +  P+ I+ L+   I Q++CG+ HCL
Sbjct: 94  GESHSLALSDR-GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 153

Query: 133 AVTMEGEVQSWGRNQNGQLGLGTT-EDALVPQKIQAFQGISIKMVAAGAEHTAAVTEDGE 192
           A+  +G+  +WG+N +GQLGLG        PQ++++ +GI +  VAAG  H+ A++  G 
Sbjct: 154 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 213

Query: 193 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYTYGWSK 252
           +FGWG    G LGL D  DR  P  V  +   K+V ++CG  HT  ++ SGG++T+G   
Sbjct: 214 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 273

Query: 253 YGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMA-LTTDGKLYGWGWNKFGQVGVG 312
            GQLGH    D + P R+  L G  ++QI+ G +HT+A + + G +Y +G    GQ+G G
Sbjct: 274 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 333

Query: 313 DNVDHCSPKQI 321
              +   P  +
Sbjct: 334 HTCNVKCPSPV 341

[Close]

BLAST of Csor.00g128280 vs. NCBI nr
Match: KAG6595606.1 (Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 719 bits (1855), Expect = 7.40e-262
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60
           MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS
Sbjct: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60

Query: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120
           ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI
Sbjct: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120

Query: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180
           RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE
Sbjct: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180

Query: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240
           HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS
Sbjct: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240

Query: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW 300
           GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW
Sbjct: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW 300

Query: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQISLDMESQWTGTHR 344
           NKFGQVGVGDNVDHCSPKQINFPSDQKVIQISLDMESQWTGTHR
Sbjct: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQISLDMESQWTGTHR 344

[Close]

BLAST of Csor.00g128280 vs. NCBI nr
Match: XP_022925283.1 (ultraviolet-B receptor UVR8 [Cucurbita moschata])

HSP 1 Score: 690 bits (1781), Expect = 5.10e-249
Identity = 330/332 (99.40%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60
           MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS
Sbjct: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60

Query: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120
           ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI
Sbjct: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120

Query: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180
           RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE
Sbjct: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180

Query: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240
           HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS
Sbjct: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240

Query: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW 300
           GGLYTYGWSKYGQLGHGDFEDRL+PHRLEALCGDSISQISGGWRHT+ALTTDGKLYGWGW
Sbjct: 241 GGLYTYGWSKYGQLGHGDFEDRLIPHRLEALCGDSISQISGGWRHTLALTTDGKLYGWGW 300

Query: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332
           NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS
Sbjct: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332

[Close]

BLAST of Csor.00g128280 vs. NCBI nr
Match: XP_023517857.1 (ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 687 bits (1773), Expect = 8.44e-248
Identity = 331/332 (99.70%), Postives = 331/332 (99.70%), Query Frame = 0


Query: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60
           MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS
Sbjct: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60

Query: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120
           ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI
Sbjct: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120

Query: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180
           RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE
Sbjct: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180

Query: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240
           HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS
Sbjct: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240

Query: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW 300
           GGLYTYGWSKYGQLGHGDFEDRLVPHRLEAL GDSISQISGGWRHTMALTTDGKLYGWGW
Sbjct: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDSISQISGGWRHTMALTTDGKLYGWGW 300

Query: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332
           NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS
Sbjct: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332

[Close]

BLAST of Csor.00g128280 vs. NCBI nr
Match: XP_022966315.1 (ultraviolet-B receptor UVR8 [Cucurbita maxima] >XP_022966316.1 ultraviolet-B receptor UVR8 [Cucurbita maxima])

HSP 1 Score: 684 bits (1765), Expect = 1.40e-246
Identity = 329/332 (99.10%), Postives = 330/332 (99.40%), Query Frame = 0


Query: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60
           MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS
Sbjct: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60

Query: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120
           ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI
Sbjct: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120

Query: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180
           RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE
Sbjct: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180

Query: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240
           HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVS S
Sbjct: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSFS 240

Query: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW 300
           GGLYTYGWSKYGQLGHGDFEDRLVPHR+EAL GDSISQISGGWRHTMALTTDGKLYGWGW
Sbjct: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRIEALRGDSISQISGGWRHTMALTTDGKLYGWGW 300

Query: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332
           NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS
Sbjct: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332

[Close]

BLAST of Csor.00g128280 vs. NCBI nr
Match: XP_038882652.1 (ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida] >XP_038882653.1 ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida] >XP_038882654.1 ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida])

HSP 1 Score: 658 bits (1698), Expect = 1.80e-236
Identity = 313/327 (95.72%), Postives = 319/327 (97.55%), Query Frame = 0


Query: 6   MEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 65
           MEATSPVRRVLFIS GASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSAL+GH
Sbjct: 1   MEATSPVRRVLFISGGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALNGH 60

Query: 66  EIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 125
           EI+SVTCGADHT AYSEA TEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSEARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 120

Query: 126 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAV 185
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTED+LVPQKIQAF+GISIKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 186 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYT 245
           TEDGELFGWGWGRYGNLGLGDRNDRL+PQKVSSVD DKMVMVACGWRHTISVSS GGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLIPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 246 YGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGWNKFGQ 305
           YGWSKYGQLGHGDFEDRLVPHRLEALCGD+ISQISGGWRHTMALTTDGKLYGWGWNKFGQ
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALCGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQ 300

Query: 306 VGVGDNVDHCSPKQINFPSDQKVIQIS 332
           VGVGDNVDHCSP QI FP DQKVIQIS
Sbjct: 301 VGVGDNVDHCSPMQIKFPQDQKVIQIS 327

[Close]

BLAST of Csor.00g128280 vs. ExPASy TrEMBL
Match: A0A6J1EER4 (ultraviolet-B receptor UVR8 OS=Cucurbita moschata OX=3662 GN=LOC111432565 PE=4 SV=1)

HSP 1 Score: 690 bits (1781), Expect = 2.47e-249
Identity = 330/332 (99.40%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60
           MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS
Sbjct: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60

Query: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120
           ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI
Sbjct: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120

Query: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180
           RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE
Sbjct: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180

Query: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240
           HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS
Sbjct: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240

Query: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW 300
           GGLYTYGWSKYGQLGHGDFEDRL+PHRLEALCGDSISQISGGWRHT+ALTTDGKLYGWGW
Sbjct: 241 GGLYTYGWSKYGQLGHGDFEDRLIPHRLEALCGDSISQISGGWRHTLALTTDGKLYGWGW 300

Query: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332
           NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS
Sbjct: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332

[Close]

BLAST of Csor.00g128280 vs. ExPASy TrEMBL
Match: A0A6J1HRA4 (ultraviolet-B receptor UVR8 OS=Cucurbita maxima OX=3661 GN=LOC111466009 PE=4 SV=1)

HSP 1 Score: 684 bits (1765), Expect = 6.76e-247
Identity = 329/332 (99.10%), Postives = 330/332 (99.40%), Query Frame = 0


Query: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60
           MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS
Sbjct: 1   MTEVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLS 60

Query: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120
           ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI
Sbjct: 61  ALDGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRI 120

Query: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180
           RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE
Sbjct: 121 RQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAE 180

Query: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSS 240
           HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVS S
Sbjct: 181 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSFS 240

Query: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGW 300
           GGLYTYGWSKYGQLGHGDFEDRLVPHR+EAL GDSISQISGGWRHTMALTTDGKLYGWGW
Sbjct: 241 GGLYTYGWSKYGQLGHGDFEDRLVPHRIEALRGDSISQISGGWRHTMALTTDGKLYGWGW 300

Query: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332
           NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS
Sbjct: 301 NKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332

[Close]

BLAST of Csor.00g128280 vs. ExPASy TrEMBL
Match: A0A1S3B513 (ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486094 PE=4 SV=1)

HSP 1 Score: 654 bits (1688), Expect = 2.90e-235
Identity = 310/327 (94.80%), Postives = 317/327 (96.94%), Query Frame = 0


Query: 6   MEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 65
           MEATSPVRRVLFISAGASHSVALLSGN+VCSWGRGEDGQLGHGDAEDR SPTQLSALDGH
Sbjct: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRFSPTQLSALDGH 60

Query: 66  EIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 125
           EI+SVTCGADHT AYSEA TEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGL+IRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSEARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120

Query: 126 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAV 185
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTED+LVPQKIQAF+GI IKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAV 180

Query: 186 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYT 245
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD DKMVMVACGWRHTISVSS GGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 246 YGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGWNKFGQ 305
           YGWSKYGQLGHGDFEDRLVPHRLEALCGD+ISQISGGWRHTMALTTDGKLYGWGWNKFGQ
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALCGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQ 300

Query: 306 VGVGDNVDHCSPKQINFPSDQKVIQIS 332
           VG GDN+DHCSP QI FP DQKVIQIS
Sbjct: 301 VGAGDNIDHCSPIQIKFPQDQKVIQIS 327

[Close]

BLAST of Csor.00g128280 vs. ExPASy TrEMBL
Match: A0A0A0L2E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G496230 PE=4 SV=1)

HSP 1 Score: 650 bits (1678), Expect = 1.12e-233
Identity = 310/327 (94.80%), Postives = 317/327 (96.94%), Query Frame = 0


Query: 6   MEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 65
           MEATSPVRRVLFISAGASHSVALLSGN+VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH
Sbjct: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60

Query: 66  EIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 125
           EI+SVTCGADHT AYS A TEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGL+IRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120

Query: 126 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAV 185
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTED+LVPQKIQAF+GISIKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 186 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYT 245
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD DKMVMVACGWRHTISVSS GGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 246 YGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGWNKFGQ 305
           YGWSKYGQLGHGDFEDRLVPHRLEAL GD+ISQISGGWRHTMALTTDGKLYGWGWNKFGQ
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQ 300

Query: 306 VGVGDNVDHCSPKQINFPSDQKVIQIS 332
           VG GDN+DHCSP QI FP DQKVIQIS
Sbjct: 301 VGAGDNIDHCSPIQIKFPQDQKVIQIS 327

[Close]

BLAST of Csor.00g128280 vs. ExPASy TrEMBL
Match: A0A6J1D6Y6 (ultraviolet-B receptor UVR8 OS=Momordica charantia OX=3673 GN=LOC111017831 PE=4 SV=1)

HSP 1 Score: 648 bits (1671), Expect = 1.35e-232
Identity = 310/330 (93.94%), Postives = 317/330 (96.06%), Query Frame = 0


Query: 3   EVVMEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSAL 62
           E V +ATSPVRRVLFISAGASHS+ALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSAL
Sbjct: 4   EGVKDATSPVRRVLFISAGASHSIALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSAL 63

Query: 63  DGHEIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQ 122
           DGHEI+SV CGADHTIAYSEA TEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQ
Sbjct: 64  DGHEIVSVICGADHTIAYSEARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQ 123

Query: 123 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHT 182
           IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT ED+LVPQKIQAFQGISIKMVAAGAEHT
Sbjct: 124 IACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTIEDSLVPQKIQAFQGISIKMVAAGAEHT 183

Query: 183 AAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGG 242
           AAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSS+D DKMVMVACGWRHTISVSSSGG
Sbjct: 184 AAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSIDGDKMVMVACGWRHTISVSSSGG 243

Query: 243 LYTYGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGWNK 302
           LYTYGWSKYGQLGHGD+EDRLVPHRLEAL  D ISQISGGWRHTMALTTDGKLYGWGWNK
Sbjct: 244 LYTYGWSKYGQLGHGDYEDRLVPHRLEALHRDYISQISGGWRHTMALTTDGKLYGWGWNK 303

Query: 303 FGQVGVGDNVDHCSPKQINFPSDQKVIQIS 332
           FGQVGVGDNVDHCSP QI FP DQ V+QIS
Sbjct: 304 FGQVGVGDNVDHCSPMQIKFPQDQNVVQIS 333

[Close]

BLAST of Csor.00g128280 vs. TAIR 10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 598.6 bits (1542), Expect = 3.2e-171
Identity = 273/326 (83.74%), Postives = 300/326 (92.02%), Query Frame = 0


Query: 7   EATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 66
           E T+P R+VL ISAGASHSVALLSG++VCSWGRGEDGQLGHGDAEDR SPTQLSALDGH+
Sbjct: 9   EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68

Query: 67  IISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIACG 126
           I+SVTCGADHT+AYS++  EVYSWGWGDFGRLGHGNSSDLFTP PIKALHG+RI+QIACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 127 DSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAVT 186
           DSHCLAVTMEGEVQSWGRNQNGQLGLG TED+LVPQKIQAF+GI IKMVAAGAEHTAAVT
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188

Query: 187 EDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYTY 246
           EDG+L+GWGWGRYGNLGLGDR DRLVP++V+S   +KM MVACGWRHTISVS SG LYTY
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTY 248

Query: 247 GWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYGWGWNKFGQV 306
           GWSKYGQLGHGD ED L+PH+LEAL    ISQISGGWRHTMALT+DGKLYGWGWNKFGQV
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV 308

Query: 307 GVGDNVDHCSPKQINFPSDQKVIQIS 333
           GVG+N+D CSP Q+ FP DQKV+Q+S
Sbjct: 309 GVGNNLDQCSPVQVRFPDDQKVVQVS 334

[Close]

BLAST of Csor.00g128280 vs. TAIR 10
Match: AT1G69710.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 192.2 bits (487), Expect = 6.9e-49
Identity = 114/335 (34.03%), Postives = 178/335 (53.13%), Query Frame = 0


Query: 18  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTCGADHT 77
           I+ G  H+V +     + SWG G+ G+LGHG   D   P  +S++ G    S+ CG  HT
Sbjct: 305 IACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHT 364

Query: 78  IAYSEACTEVYSWGWG--DFGRLGHGNSSDLFTPKPIKA-LHGLRIRQIACGDSHCLAVT 137
            A +++  ++YSWG G  +   LGHGN S  + PK +   L GL +  +ACG  H   V 
Sbjct: 365 CAITQS-GDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVA 424

Query: 138 MEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAVTE------- 197
             G++ ++G    G LG G      VP+++++  G+ +  VA G  HTAAV E       
Sbjct: 425 SSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASE 484

Query: 198 ------DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSG 257
                  G++F WG G  G LG GD + +L+P+ V S+ ++ +  VACG   T+S +S G
Sbjct: 485 AEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRG 544

Query: 258 GLYTYGWSKYGQLGH----GDFEDRLVPHRLEALCGDSISQISGGWRHTMALTTDGKLYG 317
            +YT G + YGQLG+    G+F +R+    +EA    S+ +I+ G  H   LT+  ++Y 
Sbjct: 545 HVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEA----SVEEIACGSYHVAVLTSKSEIYT 604

Query: 318 WGWNKFGQVGVGDNVDHCSPKQINFPSDQKVIQIS 333
           WG    GQ+G G+  +   P  + F  +++V  I+
Sbjct: 605 WGKGLNGQLGHGNVENKREPAVVGFLREKQVKAIT 634

[Close]

BLAST of Csor.00g128280 vs. TAIR 10
Match: AT5G12350.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 191.8 bits (486), Expect = 9.0e-49
Identity = 112/329 (34.04%), Postives = 170/329 (51.67%), Query Frame = 0


Query: 18  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTCGADHT 77
           I+ G  H+V +       SWG   +G+LGHG   +   P  + AL+   I  V CG  H+
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHS 372

Query: 78  IAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIK-ALHGLRIRQIACGDSHCLAVTME 137
            A +    ++Y+WG GDFG LGHGN    + PK +   L G+ +  IACG  H   VT  
Sbjct: 373 CAVT-LSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 432

Query: 138 GEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAVTE--------- 197
           G++ ++G    G LG G  +   +P+++ + +G+     A G  HTAAV E         
Sbjct: 433 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 492

Query: 198 ---DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLY 257
               G+LF WG G  G LG G++  +LVP  V+++ +     VACG   T+++++SG +Y
Sbjct: 493 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 552

Query: 258 TYGWSKYGQLGHGDFEDRLVPHRLEALCGDS-ISQISGGWRHTMALTTDGKLYGWGWNKF 317
           T G   YGQLG+    D   P+R+E     S + +I+ G  H   LT+  ++Y WG    
Sbjct: 553 TMGSPVYGQLGN-SHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSN 612

Query: 318 GQVGVGDNVDHCSPKQINFPSDQKVIQIS 333
           G++G GD  D  SP  +    D++V  I+
Sbjct: 613 GRLGHGDVDDRNSPTLVESLKDKQVKSIA 639

[Close]

BLAST of Csor.00g128280 vs. TAIR 10
Match: AT5G19420.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 189.9 bits (481), Expect = 3.4e-48
Identity = 112/329 (34.04%), Postives = 169/329 (51.37%), Query Frame = 0


Query: 18  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTCGADHT 77
           I+ G  H+V +       SWG   +G+LGHG   +   P  + AL+   I  V CG  H+
Sbjct: 317 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 376

Query: 78  IAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKAL-HGLRIRQIACGDSHCLAVTME 137
            A +    ++Y+WG GDFG LGHGN    + PK +  L  G+ +  IACG  H   VT  
Sbjct: 377 CAVT-LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSA 436

Query: 138 GEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAVTE--------- 197
           G++ ++G    G LG G  +   +P+++ + +G+     A G  HTAAV E         
Sbjct: 437 GQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 496

Query: 198 ---DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLY 257
               G+LF WG G    LG GD+  +LVP  V+++ +     VACG   T+++++SG +Y
Sbjct: 497 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 556

Query: 258 TYGWSKYGQLGHGDFEDRLVPHRLEALCGDS-ISQISGGWRHTMALTTDGKLYGWGWNKF 317
           T G   YGQLG+    D  VP R++     S + +I+ G  H   LT+  ++Y WG    
Sbjct: 557 TMGSPVYGQLGN-PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSN 616

Query: 318 GQVGVGDNVDHCSPKQINFPSDQKVIQIS 333
           G++G GD  D  SP  +    D++V  I+
Sbjct: 617 GRLGHGDADDRNSPTLVESLKDKQVKSIA 643

[Close]

BLAST of Csor.00g128280 vs. TAIR 10
Match: AT5G19420.2 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 189.9 bits (481), Expect = 3.4e-48
Identity = 112/329 (34.04%), Postives = 169/329 (51.37%), Query Frame = 0


Query: 18  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIISVTCGADHT 77
           I+ G  H+V +       SWG   +G+LGHG   +   P  + AL+   I  V CG  H+
Sbjct: 351 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 410

Query: 78  IAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKAL-HGLRIRQIACGDSHCLAVTME 137
            A +    ++Y+WG GDFG LGHGN    + PK +  L  G+ +  IACG  H   VT  
Sbjct: 411 CAVT-LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSA 470

Query: 138 GEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAVTE--------- 197
           G++ ++G    G LG G  +   +P+++ + +G+     A G  HTAAV E         
Sbjct: 471 GQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 530

Query: 198 ---DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLY 257
               G+LF WG G    LG GD+  +LVP  V+++ +     VACG   T+++++SG +Y
Sbjct: 531 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 590

Query: 258 TYGWSKYGQLGHGDFEDRLVPHRLEALCGDS-ISQISGGWRHTMALTTDGKLYGWGWNKF 317
           T G   YGQLG+    D  VP R++     S + +I+ G  H   LT+  ++Y WG    
Sbjct: 591 TMGSPVYGQLGN-PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSN 650

Query: 318 GQVGVGDNVDHCSPKQINFPSDQKVIQIS 333
           G++G GD  D  SP  +    D++V  I+
Sbjct: 651 GRLGHGDADDRNSPTLVESLKDKQVKSIA 677

The following BLAST results are available for this feature:

BLAST of Csor.00g128280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN03	4.5e-170	83.74	Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1	[more]
Q5GLZ8	1.1e-56	37.99	Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1...	[more]
Q5PQN1	1.1e-56	37.99	Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc...	[more]
Q6PAV2	2.0e-56	37.66	Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=...	[more]
Q15034	1.1e-54	36.98	Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1...	[more]

BLAST of Csor.00g128280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595606.1	7.40e-262	100.00	Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022925283.1	5.10e-249	99.40	ultraviolet-B receptor UVR8 [Cucurbita moschata]	[more]
XP_023517857.1	8.44e-248	99.70	ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo]	[more]
XP_022966315.1	1.40e-246	99.10	ultraviolet-B receptor UVR8 [Cucurbita maxima] >XP_022966316.1 ultraviolet-B rec...	[more]
XP_038882652.1	1.80e-236	95.72	ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida] >XP_038882653.1 ultra...	[more]

BLAST of Csor.00g128280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EER4	2.47e-249	99.40	ultraviolet-B receptor UVR8 OS=Cucurbita moschata OX=3662 GN=LOC111432565 PE=4 S...	[more]
A0A6J1HRA4	6.76e-247	99.10	ultraviolet-B receptor UVR8 OS=Cucurbita maxima OX=3661 GN=LOC111466009 PE=4 SV=...	[more]
A0A1S3B513	2.90e-235	94.80	ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486094 P...	[more]
A0A0A0L2E7	1.12e-233	94.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G496230 PE=4 SV=1	[more]
A0A6J1D6Y6	1.35e-232	93.94	ultraviolet-B receptor UVR8 OS=Momordica charantia OX=3673 GN=LOC111017831 PE=4 ...	[more]

BLAST of Csor.00g128280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63860.1	3.2e-171	83.74	Regulator of chromosome condensation (RCC1) family protein	[more]
AT1G69710.1	6.9e-49	34.03	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT5G12350.1	9.0e-49	34.04	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT5G19420.1	3.4e-48	34.04	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT5G19420.2	3.4e-48	34.04	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 123..139 score: 36.27 coord: 230..248 score: 34.21 coord: 139..153 score: 38.89 coord: 288..309 score: 43.94 coord: 15..28 score: 39.29 coord: 34..50 score: 33.33
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 240..289 e-value: 6.2E-13 score: 49.1 coord: 188..235 e-value: 1.2E-15 score: 57.9 coord: 34..79 e-value: 5.5E-15 score: 55.7 coord: 136..185 e-value: 1.9E-15 score: 57.2 coord: 292..332 e-value: 9.1E-11 score: 42.2 coord: 86..133 e-value: 1.8E-14 score: 54.1
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 227..237
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 279..289
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 18..28
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 175..185
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 32..83 score: 15.750199
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 241..292 score: 14.383399
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 85..136 score: 15.549199
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 137..188 score: 17.4788
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 189..240 score: 15.689899
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 293..344 score: 9.7001
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30		coord: 80..338 e-value: 8.4E-108 score: 362.7 coord: 3..79 e-value: 8.7E-20 score: 73.0
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 220..332
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 13..218
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 9..328
IPR032996	Ultraviolet-B receptor UVR8	PANTHER	PTHR22870:SF412	BNAA09G52370D PROTEIN	coord: 9..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g128280.m01	Csor.00g128280.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0010224	response to UV-B
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0009881	photoreceptor activity
molecular_function	GO:0042803	protein homodimerization activity