Csor.00g128090 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g128090
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionmajor pollen allergen Ole e 6-like
LocationCsor_Chr07: 7206711 .. 7207052 (+)
RNA-Seq ExpressionCsor.00g128090
SyntenyCsor.00g128090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGAAGATGATGGCAGTGCTTCTAATGTGCGTTTTGTTGGTATCCGCACTGCAATTCTCCACTGCTGATAGCCCAGCCGAAATGGAGGCCAGATTCAAGTCGTTCTTTGGTGACTTGAGCGGCGTGGAGGCCAAATTGAAGTCGTGTGCTGCAACCTGCGAGAAGGAATGTGTGGCCAAAGGCGAGACCAGTGAATCATGCAAACCAAAGTGTAACACTGATTGCGGCAAAAAGGAAGTTTCAGGTAAATTTTTTTTTTGTCTCCTAAGAGGTATTTTTAACGGTAAAATAATTTTTGCTTATTTTGCAGAGAAGTTTAACATCCATCTAACCTAA

mRNA sequence

ATGGCGAAGAAGATGATGGCAGTGCTTCTAATGTGCGTTTTGTTGGTATCCGCACTGCAATTCTCCACTGCTGATAGCCCAGCCGAAATGGAGGCCAGATTCAAGTCGTTCTTTGGTGACTTGAGCGGCGTGGAGGCCAAATTGAAGTCGTGTGCTGCAACCTGCGAGAAGGAATGTGTGGCCAAAGGCGAGACCAGTGAATCATGCAAACCAAAGTGTAACACTGATTGCGGCAAAAAGGAAGTTTCAGAGAAGTTTAACATCCATCTAACCTAA

Coding sequence (CDS)

ATGGCGAAGAAGATGATGGCAGTGCTTCTAATGTGCGTTTTGTTGGTATCCGCACTGCAATTCTCCACTGCTGATAGCCCAGCCGAAATGGAGGCCAGATTCAAGTCGTTCTTTGGTGACTTGAGCGGCGTGGAGGCCAAATTGAAGTCGTGTGCTGCAACCTGCGAGAAGGAATGTGTGGCCAAAGGCGAGACCAGTGAATCATGCAAACCAAAGTGTAACACTGATTGCGGCAAAAAGGAAGTTTCAGAGAAGTTTAACATCCATCTAACCTAA

Protein sequence

MAKKMMAVLLMCVLLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKLKSCAATCEKECVAKGETSESCKPKCNTDCGKKEVSEKFNIHLT
Homology
BLAST of Csor.00g128090 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 8.7e-04
Identity = 21/41 (51.22%), Postives = 25/41 (60.98%), Query Frame = 0

Query: 45 EAKLKSCAATCEKECVAKGETSESCKPKCNTDCGKKEVSEK 86
          EA+ K C  TC KEC  KG     C+ KC+TDC  K+V EK
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEK 42

BLAST of Csor.00g128090 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178 bits (451), Expect = 3.72e-56
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKLKSCAATCEKECV 60
          MAKKMMAVLLMCVLLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKLKSCAATCEKECV
Sbjct: 1  MAKKMMAVLLMCVLLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKLKSCAATCEKECV 60

Query: 61 AKGETSESCKPKCNTDCGKKEVSEKFNIHLT 91
          AKGETSESCKPKCNTDCGKKEVSEKFNIHLT
Sbjct: 61 AKGETSESCKPKCNTDCGKKEVSEKFNIHLT 91

BLAST of Csor.00g128090 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117 bits (294), Expect = 2.91e-32
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKLKSCAATCEKECV 60
          MAKKMMAV+LMCVL+VSALQFSTAD   EMEA+FKSFF D   VEAK KSCAATC+K+C 
Sbjct: 1  MAKKMMAVVLMCVLVVSALQFSTADKSTEMEAKFKSFFSDFGTVEAKFKSCAATCQKKC- 60

Query: 61 AKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
              T+ SC+ KC+ DCGKKEV  KF I +
Sbjct: 61 ----TNASCRSKCDADCGKKEVENKFKIKI 85

BLAST of Csor.00g128090 vs. NCBI nr
Match: KAG6595591.1 (hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104 bits (259), Expect = 6.45e-27
Identity = 56/91 (61.54%), Postives = 65/91 (71.43%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTAD-SPAEMEARFKSFFGDLSGVEAKLKSCAATCEKEC 60
          MAKKMM V+LMCVL+VS LQFSTAD S AEMEA+FKSFF D   VEA  K+C+A C K+C
Sbjct: 1  MAKKMMTVVLMCVLMVSILQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60

Query: 61 VAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
                  SC+ KC+ DCGKKEV  KF I +
Sbjct: 61 A-----DASCRNKCDADCGKKEVENKFKIKI 86

BLAST of Csor.00g128090 vs. NCBI nr
Match: KAG6595588.1 (hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103 bits (257), Expect = 1.30e-26
Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTAD-SPAEMEARFKSFFGDLSGVEAKLKSCAATCEKEC 60
          MAKKMM V+LMCVL+VS LQFSTAD S AEMEA+FKSFF D   VEA  K+C+A C K+C
Sbjct: 1  MAKKMMTVVLMCVLMVSVLQFSTADKSSAEMEAKFKSFFNDFGSVEANFKTCSAACHKKC 60

Query: 61 VAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
                  +C+ KC+ DCGKKEV  KF I +
Sbjct: 61 A-----DAACRNKCDADCGKKEVENKFKIKI 86

BLAST of Csor.00g128090 vs. NCBI nr
Match: KAG6595589.1 (hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 103 bits (257), Expect = 1.30e-26
Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTAD-SPAEMEARFKSFFGDLSGVEAKLKSCAATCEKEC 60
          MAKKMM V+LMCVL+VS LQFSTAD S AEMEA+FKSFF D   VEA  K+C+A C K+C
Sbjct: 1  MAKKMMTVVLMCVLIVSVLQFSTADKSSAEMEAKFKSFFSDFGSVEANFKTCSAACHKKC 60

Query: 61 VAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
                  +C+ KC+ DCGKKEV  KF I +
Sbjct: 61 A-----DAACRNKCDADCGKKEVENKFKIKI 86

BLAST of Csor.00g128090 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.02e-17
Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTADSPAEMEARFKSFFGDLSGVEAKLKSCAATCEKECV 60
          MAKKMMAV LMC+++V++LQF+TA+   E+ A +++ F      +AK K+C  TCEKEC+
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEV-ASYEAKF------DAKYKACFVTCEKECI 60

Query: 61 AKGETSESCKPKCNTDCGKKEVSEKFNIH 89
           +G     C+ KC+ DCG KE ++K +IH
Sbjct: 61 ERGSGHSYCEVKCDEDCGAKEAADKLHIH 82

BLAST of Csor.00g128090 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.77e-16
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTA---DSPAEMEARFKSFFGDLSGVEAKLKSCAATCEK 60
          MAKKM+A+ LMC+++V+ALQF++A   D  A+ EA+F          +AK KSC  TCEK
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKF----------DAKYKSCFKTCEK 60

Query: 61 ECVAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
          EC+  G     C+ KC+ DC +KEV++K +I L
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

BLAST of Csor.00g128090 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.77e-16
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTA---DSPAEMEARFKSFFGDLSGVEAKLKSCAATCEK 60
          MAKKM+A+ LMC+++V+ALQF++A   D  A+ EA+F          +AK KSC  TCEK
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKF----------DAKYKSCFKTCEK 60

Query: 61 ECVAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
          EC+  G     C+ KC+ DC +KEV++K +I L
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

BLAST of Csor.00g128090 vs. ExPASy TrEMBL
Match: A0A5A7T8P0 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002620 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.16e-16
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTA---DSPAEMEARFKSFFGDLSGVEAKLKSCAATCEK 60
          MAKKMMAV LMC+++V+ LQF+TA   D  A  EA+F          +AK K+C   CEK
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKF----------DAKYKACFVICEK 60

Query: 61 ECVAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
          ECV +G     C+ KC+ DCG KE ++K  I L
Sbjct: 61 ECVERGGGHSYCEVKCDEDCGAKEAADKLGIIL 83

BLAST of Csor.00g128090 vs. ExPASy TrEMBL
Match: A0A1S3CAJ3 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.16e-16
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 0

Query: 1  MAKKMMAVLLMCVLLVSALQFSTA---DSPAEMEARFKSFFGDLSGVEAKLKSCAATCEK 60
          MAKKMMAV LMC+++V+ LQF+TA   D  A  EA+F          +AK K+C   CEK
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKF----------DAKYKACFVICEK 60

Query: 61 ECVAKGETSESCKPKCNTDCGKKEVSEKFNIHL 90
          ECV +G     C+ KC+ DCG KE ++K  I L
Sbjct: 61 ECVERGGGHSYCEVKCDEDCGAKEAADKLGIIL 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O241728.7e-0451.22Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
KAG6595587.13.72e-56100.00hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595593.12.91e-3267.78hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595591.16.45e-2761.54hypothetical protein SDJN03_12144, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595588.11.30e-2660.44hypothetical protein SDJN03_12141, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595589.11.30e-2660.44hypothetical protein SDJN03_12142, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0KDP71.02e-1747.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1[more]
A0A5D3BCS21.77e-1646.24Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5301.77e-1646.24major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A5A7T8P07.16e-1647.31Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CAJ37.16e-1647.31major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015333Pollen allergen ole e 6PFAMPF09253Ole_e_6coord: 51..87
e-value: 5.4E-7
score: 29.5
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..90
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 45..89
e-value: 2.3E-9
score: 38.6
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 45..86
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g128090.m01Csor.00g128090.m01mRNA