Csor.00g128050 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g128050
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 7183482 .. 7183781 (-)
RNA-Seq ExpressionCsor.00g128050
SyntenyCsor.00g128050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCACGAGGTGGTGCTTTCCTTACCATCATCTTCTTCCTTCTCATTGTCATCTCTTCTCCCTCCACCATCATCGCAACTTCAAGACACATGCTTGCTTTGGATACTAAGGAATCACCACCTCAACCCCCCATGGATAAGCCTCCAACCTCTAATGATTTCGACACTCTTTCACTTCCTAACGGAACGAAAGCAATGCCACCCATGCCCGAATCCGCCGTTCGAAGTTGCAAGCCCAAAGGACCTGTTAGATGGTCTTCTCCGAGTCCGATCCGAAATAATTTGCCTATTTGTTAA

mRNA sequence

ATGGGTCCACGAGGTGGTGCTTTCCTTACCATCATCTTCTTCCTTCTCATTGTCATCTCTTCTCCCTCCACCATCATCGCAACTTCAAGACACATGCTTGCTTTGGATACTAAGGAATCACCACCTCAACCCCCCATGGATAAGCCTCCAACCTCTAATGATTTCGACACTCTTTCACTTCCTAACGGAACGAAAGCAATGCCACCCATGCCCGAATCCGCCGTTCGAAGTTGCAAGCCCAAAGGACCTGTTAGATGGTCTTCTCCGAGTCCGATCCGAAATAATTTGCCTATTTGTTAA

Coding sequence (CDS)

ATGGGTCCACGAGGTGGTGCTTTCCTTACCATCATCTTCTTCCTTCTCATTGTCATCTCTTCTCCCTCCACCATCATCGCAACTTCAAGACACATGCTTGCTTTGGATACTAAGGAATCACCACCTCAACCCCCCATGGATAAGCCTCCAACCTCTAATGATTTCGACACTCTTTCACTTCCTAACGGAACGAAAGCAATGCCACCCATGCCCGAATCCGCCGTTCGAAGTTGCAAGCCCAAAGGACCTGTTAGATGGTCTTCTCCGAGTCCGATCCGAAATAATTTGCCTATTTGTTAA

Protein sequence

MGPRGGAFLTIIFFLLIVISSPSTIIATSRHMLALDTKESPPQPPMDKPPTSNDFDTLSLPNGTKAMPPMPESAVRSCKPKGPVRWSSPSPIRNNLPIC
Homology
BLAST of Csor.00g128050 vs. NCBI nr
Match: KAG6595583.1 (hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199 bits (506), Expect = 2.70e-64
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1  MGPRGGAFLTIIFFLLIVISSPSTIIATSRHMLALDTKESPPQPPMDKPPTSNDFDTLSL 60
          MGPRGGAFLTIIFFLLIVISSPSTIIATSRHMLALDTKESPPQPPMDKPPTSNDFDTLSL
Sbjct: 1  MGPRGGAFLTIIFFLLIVISSPSTIIATSRHMLALDTKESPPQPPMDKPPTSNDFDTLSL 60

Query: 61 PNGTKAMPPMPESAVRSCKPKGPVRWSSPSPIRNNLPIC 99
          PNGTKAMPPMPESAVRSCKPKGPVRWSSPSPIRNNLPIC
Sbjct: 61 PNGTKAMPPMPESAVRSCKPKGPVRWSSPSPIRNNLPIC 99

BLAST of Csor.00g128050 vs. NCBI nr
Match: KGN54792.1 (hypothetical protein Csa_012277 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 5.81e-12
Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 0

Query: 1   MGPRGGAFLTIIFFLLIVISSPSTIIATSRHMLALD-----------TKESPPQPPMDKP 60
           M PR   FL I  F L ++SSP+T++ATSR++L L+            + S         
Sbjct: 1   MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTT 60

Query: 61  PTSNDFDTLSLPNGT-KAMPPMPESAVRSCKPKGPVRWSSPSPIRNNL 96
           PTS   ++L L  G  +       S ++SCKPKGP+RWSSPSP+RNNL
Sbjct: 61  PTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNL 108

BLAST of Csor.00g128050 vs. NCBI nr
Match: KAG6573847.1 (hypothetical protein SDJN03_27734, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.4 bits (150), Expect = 7.10e-10
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0

Query: 50  PTSNDFDTLSLPNGTKAMPPMPESAVRSCKPKGPVRWSSPSPIRNNLPI 98
           PTSNDF    +PNG  A PPM    +RSCKPKG +R+S+PS  RN+LP+
Sbjct: 66  PTSNDFVAFEVPNGMDAKPPMSNRVIRSCKPKGRMRYSAPSDRRNSLPL 114

BLAST of Csor.00g128050 vs. NCBI nr
Match: KAE8649709.1 (hypothetical protein Csa_012565, partial [Cucumis sativus] >KAE8649711.1 hypothetical protein Csa_012458, partial [Cucumis sativus] >KGN55007.2 hypothetical protein Csa_012551, partial [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 4.61e-08
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query: 13  FFLLIVISSPSTIIATSRHMLAL-------------DTKESPPQPP-----MDKPPTSND 72
           FF LI +SSPS I+AT+R ML L             + +ES  + P     +  PPTS++
Sbjct: 12  FFFLIAMSSPSKIMATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESSSSISLPPTSDE 71

Query: 73  FDTLSLPNGTKAMPPMPESAVRSCKPKGPVRWSSPSPIRN 94
           F +   PNG  A  P+P S +  CKPKGP+ WS+P+P  N
Sbjct: 72  FISFD-PNGMGARAPLPASLL-DCKPKGPIAWSAPNPKHN 109

BLAST of Csor.00g128050 vs. NCBI nr
Match: KAE8649707.1 (hypothetical protein Csa_012825 [Cucumis sativus])

HSP 1 Score: 59.3 bits (142), Expect = 6.64e-08
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 0

Query: 13  FFLLIVISSPSTIIATSRHMLAL-------------DTKESPPQPP-----MDKPPTSND 72
           FF LI +SSPS IIAT+R ML L             + +ES  + P     +  PPTS++
Sbjct: 12  FFFLIAMSSPSKIIATTRGMLDLAQPPTTLEESTIRNFRESIAEVPESSSSISLPPTSDE 71

Query: 73  FDTLSLPNGTKAMPPMPESAVRSCKPKGPVRWSSPSPIRNNLP 97
           F +   PNG  A  P+P S +  CKPKGP+ WS+P+P ++N+P
Sbjct: 72  FISFD-PNGMGARAPLPASLL-DCKPKGPIAWSAPNP-KHNIP 111

BLAST of Csor.00g128050 vs. ExPASy TrEMBL
Match: A0A0A0L2F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499295 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.81e-12
Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 0

Query: 1   MGPRGGAFLTIIFFLLIVISSPSTIIATSRHMLALD-----------TKESPPQPPMDKP 60
           M PR   FL I  F L ++SSP+T++ATSR++L L+            + S         
Sbjct: 1   MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDALSFVQRSSRHLATTTT 60

Query: 61  PTSNDFDTLSLPNGT-KAMPPMPESAVRSCKPKGPVRWSSPSPIRNNL 96
           PTS   ++L L  G  +       S ++SCKPKGP+RWSSPSP+RNNL
Sbjct: 61  PTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNL 108

BLAST of Csor.00g128050 vs. ExPASy TrEMBL
Match: A0A5A7V1K1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1073G00050 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.37e-08
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0

Query: 20 SSPSTIIATSRHMLALD----TKESPP--------QPPMDKPPTSNDFDTLSLPNGTKAM 79
          SSP+T++ATSR+ L L+    T ++ P               PTS   ++L L  G +  
Sbjct: 2  SSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQEQ 61

Query: 80 PPMP-ESAVRSCKPKGPVRWSSPSPIRNNL 96
                S + SCKPKGPVRWSSPSP+RNN+
Sbjct: 62 TSTATHSTLHSCKPKGPVRWSSPSPLRNNV 91

BLAST of Csor.00g128050 vs. ExPASy TrEMBL
Match: A0A5D3CFX3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002500 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.67e-08
Identity = 31/92 (33.70%), Postives = 48/92 (52.17%), Query Frame = 0

Query: 21  SPSTIIATSRHMLALDTKESPPQPPMDK--------------PPTSNDFDTLSLPNGTKA 80
           +P+  ++T    L +D K S   PP+ +              PP+  DF    +P+   A
Sbjct: 35  APTPTMSTQAPTLIVDAKPSASSPPLSEATLVAGFGSSSTSMPPSFGDFVAFEVPSEVSA 94

Query: 81  MPPMPESAVRSCKPKGPVRWSSPSPIRNNLPI 98
            PP P+  +RSCKPKG +R+S+PS  RN+ P+
Sbjct: 95  NPPTPDWMIRSCKPKGRMRYSAPSDRRNSEPL 126

BLAST of Csor.00g128050 vs. ExPASy TrEMBL
Match: A0A0A0KRI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622650 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.83e-05
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0

Query: 49 PPTSNDFDTLSLPNGTK-AMPPMPESAVRSCKPKGPVRWSSPSPIRNNLPI 98
          PP+  DF    +P+    A PPMP+  +RSCKPKG +R+S+PS  RN+ P+
Sbjct: 44 PPSFGDFVAFEVPSEVSTANPPMPDWMIRSCKPKGRMRYSAPSDRRNSEPL 94

BLAST of Csor.00g128050 vs. ExPASy TrEMBL
Match: A0A0A0KYN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499280 PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.38e-04
Identity = 37/107 (34.58%), Postives = 52/107 (48.60%), Query Frame = 0

Query: 1   MGPRGGAFLTIIFFLLIVISSPSTIIATSRHML----------ALDTKESPPQPPMDKPP 60
           M  R   FL I  FL I+ SS   I+ATSR++L          AL   +   +  +    
Sbjct: 1   MALRCFPFLFIYLFLFIMSSSTILIMATSRNLLPLPPTTLTNNALPFTQQSSRYLVATTT 60

Query: 61  TSNDFDTLSLPNGTKAMPP-MPESAVRSCKPKGPVRWSSPSPIRNNL 96
           ++    TL +P   +     M  S ++SC PKGP+ WSSPSP RN +
Sbjct: 61  STMTHSTLKMPKENQEQTSTMTHSTLQSCMPKGPITWSSPSPKRNGV 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6595583.12.70e-64100.00hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN54792.15.81e-1240.74hypothetical protein Csa_012277 [Cucumis sativus][more]
KAG6573847.17.10e-1057.14hypothetical protein SDJN03_27734, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8649709.14.61e-0841.00hypothetical protein Csa_012565, partial [Cucumis sativus] >KAE8649711.1 hypothe... [more]
KAE8649707.16.64e-0841.75hypothetical protein Csa_012825 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0L2F62.81e-1240.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499295 PE=4 SV=1[more]
A0A5A7V1K14.37e-0841.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CFX37.67e-0833.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KRI33.83e-0547.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622650 PE=4 SV=1[more]
A0A0A0KYN09.38e-0434.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499280 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g128050.m01Csor.00g128050.m01mRNA