Csor.00g128000 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g128000
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 7160228 .. 7165418 (-)
RNA-Seq ExpressionCsor.00g128000
SyntenyCsor.00g128000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCACCAAGATCCCAAGTTGGTGGCAATGTTTTTGGTAAGAATCTAAGCGATTCAGGTGGTATAGATTCGTGATTAAACTATTATCAATGAGTTTTAATCTTGGAATATCATGTTTGTGATATGTTTGTATATGATTTATTGACCTCTTCTACTAATTTGAATATAGACTTGATGCATTAGCATGCTAAAGATTTGTGAGATTGAGTTAAAAGCATGGTGCTTCGAATGTTTGTAAAAGTTCATGCCATGTACGTTCATGCTTCATTTCTGTTTATGAGAAAACTGTGATAGTGTTGTTAATGTATTAAGGCTAAGGAAGTAAGACTTGTTAAGGTAGGTAGTAGGGCGCCTGGTAAACAGGATTGGGGATTGACATGTCTGAATCTATAAGGGTGAGTATTAGGGTCTTGAGTATAAATTGTCATGGGTCAGTGCGTTGTGAGGTATTGAGCTAAATGTCATGGTTTTTGGTAGAAAGGGGCAAGGGCTAATTTGGCTAGGTTTGAATTGTGAGATCCCATATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGACGCTTTTTAAAAACCTCGAGGGGAAGTCCGAAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTATACTTGTTAAAAATAATTAAGGGCCAATGGGTTGGGAGGTGAAGAGCTATGTGTTGGAACATTAGAGATAACTGTTGGGGCCTTAGGTAGAAATGGTGGGCAAATGAGATAGAGAGAATGTGTGATTATGAAGCCAATAAGGTGTTGATGTACTTGGGTGTGTAATTATGTGAATTTTATTACTAGAGTTAGAACTAAAGGTTGATGGGGAAGGGAAGGAAAGGTTAAGAAATAATTGGAAATGGGAGTCTTTTATAGAGTTACATGAAGTCTTGAAAAATTTGTACTCATTCTTTTCGATGTTAGATGTTAAACATAACATTGTGGAGAGATACTATGCGAGATCTCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGCTGTGAAAACCTTTCCCTAACAAACGCTTTTTAAAACCAAAAGGCCGACGACGATACGTAACGAGCGAAAGCACTAGCGATGAGTTTGGGCTGTTACAAAATGGTATCAGAGCTAGACACCGGGCAGTGTGCCAGCGATGACACTAGGCCCCGAAGGGGGGTAGATTGTGAGATCCCACATCGGTTGGAGAGGGGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACTATGAGGCCGACAGCGATACGTAACGGGCCAAAGCGGATGATATCTACTAGCGGTGGGCTTGGGTTGTTACATACTATGATCATTGCCAAATAAAAGTAATTCAATTTTCGAGTTTTCTTTTAGAATATTACATTACATGTGAAAATGGAGATTCAAACTTACAACTTCATATATCGAAGTGAAGATGCCTTTAACTGTTGTTCTATAAAAGAAATCTAGTGTTGGGGAGAGAAGAATGTAGATAAGTGGATAAGTGAAGTAACATTGGGCCATTAATTATTGATGAACATAAAACTGGAATGAAAATTAATGCATAGTAGACGAGAAGTAAGAATTTGACCTTGACTATACTTCATTATTTTCGATTTCCTGAGTAGATACATAATACCTTAACCAAATGAGAGAAGCTCAGGTTAACTTCTTTCTCGTATTTTATAATATGGAATAACTGTGTTATCAGGGAGATAGTGAAAGCGAGCAACAAGGAAAAGGCGATAGCAACCTCATTAGCAAGAGTAATATGAGATGTCAACACTGTGCGGGTCCTCTCTCGAAGGATATGGTCTTGTGCCTTCATTCTAAATTTACTTATATTTTCTTGAACTGCACCCGAGTCTCGCTTTAATCTGTATTTCCGTATGCATATTGCAGGAAACCAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGGTATTATTCTTTATTCAAACATCACCACGAACGCATTGTTTTCTATCATCTAGAAAATTGTAACTTGTCGTAATCTTGTTCGCTTTCCTGTTGGAATGTTTTGGACATCTCTTAGATTGGCTCTGCTGTTGGTGGTACTGCCAGTGCTTTTTATGGATTTAATCATGGTAATATACCCCTCGCCTTTCGATAAATCCAACAAATACAATACGAGTTGTTATGTTCGTCGTTTTCTTGTATCAAGTAATAGCTCATATTTTTTAATGTCAACGCAGTGATGCCGGTTGTCCAGAGATCAGTGAAAGGGCCTATGTGGTTGCATTTTCTTATTGGTGTAAGTACCTTATTGCTTTCCATTGTTATAATTATGAACTGTTCCAAAATCTATTTCCAGGTACTTTTGATTCTTTGATTTCTAGTCTTTCTTTTGATGTGATAGAAGATTTAGTAGTTTGTACAATATTAGCTAATAGCAACATTGCTGAGGTTTCTTCCAAATTTCTGAAAGGTCTTAGGAACACATTCTGAAAATTAAGATTGTCAATCATGCTATTCACCAAAAATCTTATACTTTTGTTGTCCATTAGCATAAACCTATTTGTGTGATCCCACGTCGGTTGGAGAGAGGAATGAAACATTTCTTATAAGGGTGTGAAACCTCTCCCTAGTAGACGCGTTAAAAAACATTGAGGGGAAGCCTGGAAAGGGAAGCCCAAAGAGGATAATATCTGCTAGCGGTGGGTTTGAGTTGTTACAAATGGTATCAGAGCCAGACACTGGGCGCTGACGCTGGGCCCTCAAGGGGGTGGATTGTGAGATCTCATATTGGTTGGAGAGGGAACGAAACATTTCTTATAAGGGTGTGAAACCTCTCCCTAGTAGACGCATTAGAAAACCTTGGGGGGAAGCCTAGAAAGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGGGTTTGGGTTGTTACAAATGGTATCAGAGCTAGGCTCCGGGCACTGTCCAGCAAGGACGCTGGGCCCTCAAGGGGGTGGATTGTGAGATCTCATATTGGTTGGAGAGGGAACGAAACATTTCTTACAAGGGTGTGAAAACCTCTCCCTAGTAGACGTGTTTTAAAATTGTGAGGCTGACGGCTAAAACGGACAATATCTGCTGTGGAAAATAAATACCTTAAAAACATCTAAAGGGAACGTGTAACTGCTTCTACAAACCATGGTGGTCACTAGAGACTACAACATTGTTAGGTTCTTGAGTGAAATCTTTGTCGATGGTTTTGCAAAATTTTGATATGCCACCGATCAAGTTTACACGCACTAAAGAGTGAAAGGACCGAAAGTGGCCCAAAACATGGAGGCCTAATTATAGTTAGAAAAGGGAGTTGCGTGATCATTCCTTTTGATGGGAGTTGCTTTGGCTTGGTTTTGATGGGAGATTGATGGACATCATTGAAGGGCTTGGTCTATATATAAAGCTGGAAGATTGTAATAGTCCAAGTCCATGGAAGATTGTAATAGTCCAAGTCCATCGCTAGCCGATATTGTCCTCTTTGAGTTTTTCCTTCTAGGCTTCCCTTCACGGTTTTGAAACGCGTTCACTAGGGAGAGGTTTCTATACTCTTACGAGGAATGCTTCGTTCCCCCTCTCCAGTTGATGTGAGATTTCACAATCCACACTCCTCTGGAGGCCCAACGTCCTTGTTGGCACACCGCGTGGTGTCTGACTTTGATACCATTTGTAACAGTCCAAGCCTACCGCTAGCGGATATTGTCCTCTTTGGGCTTTTCCTTCCGGGCTTCCCTTCAAGGTTTTAAAATGCGTCCACTAGGGAGAAGTTTCCACATCCTTATAAGGAATGTGTCGTTCCCCTCTCCAACCGAAATGTTGTTGGTGAAAAGGAGGGTCTTTTGGTGTGGATCAATGGCCTTCCTGACCCTTCTCTTGTTAATGAGTTTCCTGATGTCCTAATGGCTCCTTAGCCAAGCTAGAAAAGCATCTAACAAACTCTATTAAGATTCACGAAGGAATGTGCGCATTTTTTCAATAGCTGTTATGATGTGAAGCCTATTCTTGGAGGAGTGTTTTAAATAGAATGTTCATATTTCTCTATCATTGGGTTGCCTCTTAGGAAGCATATCTTTTATCCTGAACATGATTGTCACTTTTCACTAGGAGGAAAATACATGATGTTCAAAGAAACCTTCGAACTCTCTTGCATCGTACCCATACGCATATTTGCTAGTTATGTTTTTTCGCCTCACGAGTTCATGACCTTTGAAAACTCTCCAAAGCCAATTCGAAGAAGACTGACACTTCTAAATGGTACTATGAGATCTCACATTGGTTGGAGAGGGGAATGAAGCATTCCTTCTAAGGGTGTGGAAACCTCTCCCTAACAGACGCATTTTAAATTTGTGAGGTTGACGGCAATACGTAATGGGCCAAAACAGACAATATCTACTAGCGGTGGGCTTTGGCTGTTACAGTTCTAGAAAGAGTCAATCCATTATAGCTTGATATTTGATATAGAATAATCTCTCACTAGATAGCTAACGATGAAACCAAATTTGCTCGAGAAACTAAACAGTGATGAATGGGTCTTAAGACAGAAAATTTAATGTTCTAGTTCTCTCTCGAGTGGAAACATTATACCTCATTAGAGTTAATGATTACTGCAAATGTTGTCTCACTTGCAGGCTCCTCCTGTGATTGTGTTTTCTTCAGCTTGTGCAGGAATGGCAGGTTAGTTCTTTTATCCTTGTTTAATAACTGGAGCTGTTCTGTTCTTCTTTCTGCAAAAATGCTTCATAGAAATGCAAACACAATTGCTTTACCTTGTTAGGATGAGTAGCAATGATATGCAATGCCATTTTGTTAGCTTTGGAAACATGAACACATTTTGAGTATCAACTACTGCTCTGAAATTGGGTTAAAATACCATATTCATCTTTGTACTTCGAGCATCGAACGCATCGATCAAACTTTCAAATGTCCAAATTTAGTCGTAAAGGGGTCTGTGAAAGATGGTTTTAGGTACCAAAGTTGAGTTGATATTAAATGAATGCTTTGCAGGTGGTGCTGTTCCAGCTTTGGCCCAACTTTTTTCATCATCTTATCATTCAGCCATGTCTCCTTCAAAAGATGACAAGACTCACGATTCAAGATCATCTTCTACCATGTAA

mRNA sequence

ATGAACCACCAAGATCCCAAGTTGGTGGCAATGTTTTTGGGAGATAGTGAAAGCGAGCAACAAGGAAAAGGCGATAGCAACCTCATTAGCAAGAGTAATATGAGATGTCAACACTGTGCGGGTCCTCTCTCGAAGGATATGGAAACCAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCCAGTGCTTTTTATGGATTTAATCATGTGATGCCGGTTGTCCAGAGATCAGTGAAAGGGCCTATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTGTGTTTTCTTCAGCTTGTGCAGGAATGGCAGGTGGTGCTGTTCCAGCTTTGGCCCAACTTTTTTCATCATCTTATCATTCAGCCATGTCTCCTTCAAAAGATGACAAGACTCACGATTCAAGATCATCTTCTACCATGTAA

Coding sequence (CDS)

ATGAACCACCAAGATCCCAAGTTGGTGGCAATGTTTTTGGGAGATAGTGAAAGCGAGCAACAAGGAAAAGGCGATAGCAACCTCATTAGCAAGAGTAATATGAGATGTCAACACTGTGCGGGTCCTCTCTCGAAGGATATGGAAACCAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCCAGTGCTTTTTATGGATTTAATCATGTGATGCCGGTTGTCCAGAGATCAGTGAAAGGGCCTATGTGGTTGCATTTTCTTATTGGTGCTCCTCCTGTGATTGTGTTTTCTTCAGCTTGTGCAGGAATGGCAGGTGGTGCTGTTCCAGCTTTGGCCCAACTTTTTTCATCATCTTATCATTCAGCCATGTCTCCTTCAAAAGATGACAAGACTCACGATTCAAGATCATCTTCTACCATGTAA

Protein sequence

MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Homology
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BLAST of Csor.00g128000 vs. NCBI nr
Match: XP_022925022.1 (uncharacterized protein LOC111432392 [Cucurbita moschata] >XP_023517210.1 uncharacterized protein LOC111781045 [Cucurbita pepo subsp. pepo] >KAG6595578.1 hypothetical protein SDJN03_12131, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307 bits (786), Expect = 2.70e-105
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60
           MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD
Sbjct: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60

Query: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120
           SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV
Sbjct: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120

Query: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152
           PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Sbjct: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152

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BLAST of Csor.00g128000 vs. NCBI nr
Match: XP_022966472.1 (uncharacterized protein LOC111466117 [Cucurbita maxima])

HSP 1 Score: 303 bits (775), Expect = 1.28e-103
Identity = 149/152 (98.03%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60
           MNHQDPKLVAMFLGDSES+QQGKGDSNLI+KSN+RCQHCAGPLSKDMETSAWTIPPLIRD
Sbjct: 1   MNHQDPKLVAMFLGDSESKQQGKGDSNLINKSNIRCQHCAGPLSKDMETSAWTIPPLIRD 60

Query: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120
           SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV
Sbjct: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120

Query: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152
           PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Sbjct: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152

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BLAST of Csor.00g128000 vs. NCBI nr
Match: KAG7027560.1 (hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295 bits (755), Expect = 2.87e-100
Identity = 152/172 (88.37%), Postives = 152/172 (88.37%), Query Frame = 0 

Query: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60
           MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD
Sbjct: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60

Query: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIG------------------- 120
           SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIG                   
Sbjct: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYF 120

Query: 121 -APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152
            APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Sbjct: 121 QAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 172

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BLAST of Csor.00g128000 vs. NCBI nr
Match: KAE8647791.1 (hypothetical protein Csa_004224 [Cucumis sativus])

HSP 1 Score: 236 bits (601), Expect = 9.65e-77
Identity = 118/137 (86.13%), Postives = 125/137 (91.24%), Query Frame = 0 

Query: 14  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTA 73
           G S ++QQGKG +NL   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTA
Sbjct: 39  GVSVNKQQGKGYNNLTRMSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTA 98

Query: 74  SAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHS 133
           SAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGM GGAVPALAQL +SSYHS
Sbjct: 99  SAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVASSYHS 158

Query: 134 AMSPSKDDKTHDSRSSS 150
             S S+DDKT DSRSSS
Sbjct: 159 LTSSSEDDKTQDSRSSS 175

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BLAST of Csor.00g128000 vs. NCBI nr
Match: XP_022149788.1 (uncharacterized protein LOC111018136 isoform X1 [Momordica charantia])

HSP 1 Score: 231 bits (589), Expect = 4.06e-75
Identity = 113/129 (87.60%), Postives = 118/129 (91.47%), Query Frame = 0 

Query: 7   KLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIG 66
           KL     GDSES+ Q KGD NLI  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIG
Sbjct: 26  KLGLCQQGDSESKLQRKGDKNLIRMSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIG 85

Query: 67  SAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQL 126
           SAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIGAPPVIVFSSACAGMAGG VPALAQL
Sbjct: 86  SAVGGTASAFYGFNHVMPIVRRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGGVPALAQL 145

Query: 127 FSSSYHSAM 135
           FS+SYHSA+
Sbjct: 146 FSTSYHSAV 154

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BLAST of Csor.00g128000 vs. ExPASy TrEMBL
Match: A0A6J1EAN3 (uncharacterized protein LOC111432392 OS=Cucurbita moschata OX=3662 GN=LOC111432392 PE=4 SV=1)

HSP 1 Score: 307 bits (786), Expect = 1.31e-105
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60
           MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD
Sbjct: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60

Query: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120
           SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV
Sbjct: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120

Query: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152
           PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Sbjct: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152

[Close]
BLAST of Csor.00g128000 vs. ExPASy TrEMBL
Match: A0A6J1HN28 (uncharacterized protein LOC111466117 OS=Cucurbita maxima OX=3661 GN=LOC111466117 PE=4 SV=1)

HSP 1 Score: 303 bits (775), Expect = 6.22e-104
Identity = 149/152 (98.03%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRD 60
           MNHQDPKLVAMFLGDSES+QQGKGDSNLI+KSN+RCQHCAGPLSKDMETSAWTIPPLIRD
Sbjct: 1   MNHQDPKLVAMFLGDSESKQQGKGDSNLINKSNIRCQHCAGPLSKDMETSAWTIPPLIRD 60

Query: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120
           SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV
Sbjct: 61  SFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAV 120

Query: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152
           PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Sbjct: 121 PALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM 152

[Close]
BLAST of Csor.00g128000 vs. ExPASy TrEMBL
Match: A0A6J1D7Q1 (uncharacterized protein LOC111018136 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018136 PE=4 SV=1)

HSP 1 Score: 231 bits (589), Expect = 1.97e-75
Identity = 113/129 (87.60%), Postives = 118/129 (91.47%), Query Frame = 0 

Query: 7   KLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIG 66
           KL     GDSES+ Q KGD NLI  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIG
Sbjct: 26  KLGLCQQGDSESKLQRKGDKNLIRMSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIG 85

Query: 67  SAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQL 126
           SAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIGAPPVIVFSSACAGMAGG VPALAQL
Sbjct: 86  SAVGGTASAFYGFNHVMPIVRRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGGVPALAQL 145

Query: 127 FSSSYHSAM 135
           FS+SYHSA+
Sbjct: 146 FSTSYHSAV 154

[Close]
BLAST of Csor.00g128000 vs. ExPASy TrEMBL
Match: A0A0A0L0B0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338930 PE=4 SV=1)

HSP 1 Score: 234 bits (596), Expect = 1.30e-74
Identity = 117/141 (82.98%), Postives = 125/141 (88.65%), Query Frame = 0 

Query: 12  FLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGG 71
            LG S ++QQGKG +NL   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG
Sbjct: 156 LLGVSVNKQQGKGYNNLTRMSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMISSAVGG 215

Query: 72  TASAFYGFNHVMPVVQRSVKGPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSY 131
            ASAFYGFN+VMPVVQRSVKGPMWLHFLIGAPPVI+FSSACAGM GGAVPALAQL SSSY
Sbjct: 216 IASAFYGFNNVMPVVQRSVKGPMWLHFLIGAPPVIIFSSACAGMTGGAVPALAQLVSSSY 275

Query: 132 HSAMSPSKDDKTHDSRSSSTM 152
           HS  S S+DDK  DSRSSS++
Sbjct: 276 HSLTSSSEDDKAQDSRSSSSL 296

[Close]
BLAST of Csor.00g128000 vs. ExPASy TrEMBL
Match: A0A1S4E0V5 (uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 1.18e-72
Identity = 111/121 (91.74%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 32  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVK 91
           SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVK
Sbjct: 2   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNTVMPVVQRSVK 61

Query: 92  GPMWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSST 151
           GPMWLHFLIGAPPVIVFSSACAGM GGAVPALAQL +SSYHS  S SKDDK+ DSRSSST
Sbjct: 62  GPMWLHFLIGAPPVIVFSSACAGMTGGAVPALAQLVASSYHSLTSSSKDDKSRDSRSSST 121

[Close]
BLAST of Csor.00g128000 vs. TAIR 10
Match: AT3G04040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 171.0 bits (432), Expect = 7.3e-43
Identity = 84/121 (69.42%), Postives = 102/121 (84.30%), Query Frame = 0 

Query: 35  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPM 94
           RC HCAGPL+K++ET+ WT+ P IRDSFSMIGSAVGGTASAF GF+HVMP+V++ +KGPM
Sbjct: 15  RCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPM 74

Query: 95  WLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDS---RSSST 153
           WLHFL+GAPPVIV SSACAG+AGGAVPALAQL SSSYH+A+  S+  +  D     +SST
Sbjct: 75  WLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHSSQPPQGQDKNQLHNSST 134

[Close]
BLAST of Csor.00g128000 vs. TAIR 10
Match: AT5G18250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 168.7 bits (426), Expect = 3.6e-42
Identity = 84/122 (68.85%), Postives = 99/122 (81.15%), Query Frame = 0 

Query: 34  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGP 93
           +RC HCAGPL++++ETS WT+ P IRDSFSMIGSAVGGTASAF GFNH MP+V++ +KGP
Sbjct: 10  IRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGP 69

Query: 94  MWLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSY----HSAMSP--SKDDKTHDSR 150
           MWLHFL+GAPPVIV SSACAG+AGG VPALAQL SSSY    HS+  P   KD+K   S 
Sbjct: 70  MWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQKDNKMQKST 129

[Close]
BLAST of Csor.00g128000 vs. TAIR 10
Match: AT2G41945.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0 

Query: 35  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPM 94
           RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G  
Sbjct: 30  RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSK 89

Query: 95  WLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPS 139
            L FL+G P ++V+S   A   G A+P  AQL  +SY+++ S S
Sbjct: 90  RLSFLVGVPLLLVYSGVGAAFGGYALPKFAQLTVTSYYASSSAS 133

[Close]
BLAST of Csor.00g128000 vs. TAIR 10
Match: AT2G41945.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0 

Query: 35  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPM 94
           RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G  
Sbjct: 30  RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSK 89

Query: 95  WLHFLIGAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPS 139
            L FL+G P ++V+S   A   G A+P  AQL  +SY+++ S S
Sbjct: 90  RLSFLVGVPLLLVYSGVGAAFGGYALPKFAQLTVTSYYASSSAS 133

[Close]
BLAST of Csor.00g128000 vs. TAIR 10
Match: AT2G41945.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 6.2e-10
Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 0 

Query: 35  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPM 94
           RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G  
Sbjct: 30  RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSK 89

Query: 95  WLHFLIGAPPVIVFSSACAGMAGGAVPALA 125
            L FL+G P ++V+S   A        A++
Sbjct: 90  RLSFLVGVPLLLVYSGVGAAFGESLQAAIS 119

The following BLAST results are available for this feature:
BLAST of Csor.00g128000 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g128000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925022.12.70e-105100.00uncharacterized protein LOC111432392 [Cucurbita moschata] >XP_023517210.1 unchar... [more]
XP_022966472.11.28e-10398.03uncharacterized protein LOC111466117 [Cucurbita maxima][more]
KAG7027560.12.87e-10088.37hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAE8647791.19.65e-7786.13hypothetical protein Csa_004224 [Cucumis sativus][more]
XP_022149788.14.06e-7587.60uncharacterized protein LOC111018136 isoform X1 [Momordica charantia][more]
BLAST of Csor.00g128000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EAN31.31e-105100.00uncharacterized protein LOC111432392 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
A0A6J1HN286.22e-10498.03uncharacterized protein LOC111466117 OS=Cucurbita maxima OX=3661 GN=LOC111466117... [more]
A0A6J1D7Q11.97e-7587.60uncharacterized protein LOC111018136 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A0A0L0B01.30e-7482.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G338930 PE=4 SV=1[more]
A0A1S4E0V51.18e-7291.74uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=... [more]
BLAST of Csor.00g128000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04040.17.3e-4369.42unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G18250.13.6e-4268.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G41945.11.9e-1437.50unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G41945.21.9e-1437.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G41945.36.2e-1033.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..152
NoneNo IPR availablePANTHERPTHR34459:SF3OS01G0264500 PROTEINcoord: 30..151
NoneNo IPR availablePANTHERPTHR34459OS01G0264500 PROTEINcoord: 30..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g128000.m01Csor.00g128000.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane