Csor.00g127610 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g127610
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein RETICULATA-RELATED 3, chloroplastic-like
Location	Csor_Chr07: 6865193 .. 6867651 (+)
RNA-Seq Expression	Csor.00g127610
Synteny	Csor.00g127610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGAGAATATTTCTCCCACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGATTTTCCTATTAAAATAAAATCTACTTAAAAAGAAAAGGAAAAAAAAAAAAATTTGACGTGAAACCCGCCACCTAAGAATGACTCCTTGACCAGTTACCTAAATTTGACTTTAAGAATATTTGTCTCACTACTAGAGATGTCCACATCTTCCCCGGTAGAGACTAGCTTCGAACAAAGTAGTCTTCAAAAATATATTCTCATACCGTCCTCTATCAAGTCAAATTTTTTATTAAGTATTTTTTTTAATAAAAATAGTGTTTTTACCAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAAAATTAAATAATTAAAGATTTATGGACTTAAAATAGAGAAAGTAGTGAATATTAGAACAAATAATTAATTAATTAATTAATAGAGTAACATTTTCCAGCCAATTATAAAATATAATTGCTTTAATAATTTTAGTTTGTATATTTTGGAAATATCTGTATAATTTTAAAAAGTGACAAGAAAAAAAAAACTAAAATTTAAATTATAAAATATTAAACAAATTTATATTTGCCTTAAAAAAAAAAACCATATATATATATGATAAGTCAAAATTAGAGATAAAGTTTTATTTGGTTACAAATTTTATTTTCAAAAGAAAACAATCTCATTTTGGATGTTAATAAGAAATGAAAAAAGAAAAAAAAACGAAAAGGAAAAGAAACGAAAAAACGTAATAAAAAAATCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATGGCTTTGGAATATATTACCACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGATTTGCTTTGCCTAATCGGTTGATAATATTTAATACTAAATATTGTATCGTTAGGGTTTACAGAGAGAGAGAGAGAGAGTAAGAAAAAAGCGAAACAGAGATTTAACTGCTGACGATTAACGCCTCTTCTCTCTATATATATACATTCCTCAGTTCAACAGTACCGTTCTTCACCCGTTTCCGCCACCAACTCCTCCCTCCCTTCTCCTCTCCATTTTTGGCTGCGCCAATTCACCTCCTGTCGTGATTCTTCTCTTTTTCAAGGTAATTCCAGTCTCCCATCATTTGTTTTCGTGTGTTTTATGTTGATCGTGTGATCCCTGTTCTGTATTGCCTCTTTCTCCCCCATTTTGATCCATTTTCCGCTTCAGATCTGGTGAATACTTGTTGAATTTGGTTGTTTTTGTTTTTCTGAATCTGTGTTTGTTGTTTGTTTTTTCAGCTTTCAGGAATTGGGTGCGTTTGTTTTTTTGAGGGATTTCTTTTGTGGAACTATGGCGTCCATGGCTCAGCTGCATTGCTCTGTTCGTCCTAGGGGTTATTATAATGTTCCCCGTAGTCATGCTTATAACGATCCTCCGGCTTTCTCTTTTCTGTCTAATTCGTCGGCGGTAGAATCGAGGAGTCGATCTCTTTCTCTTTTTAATGCGGACTTAACGAGGTCTAGGTTTTTGGTGAAATCTGAACTCTCTCTTGCTGGTGGCGACGGTGGAAATGGCGTTGGCCGCGGTGGAGGAGGTGGCGGCGGTGGTGGTGACAGTGGTGGTTGGAGCGATGATCGGGCTGATGGGGATGATTCGTCGAGTTTTGGAGTGTTTGGATTGTTTCTTCAAGGGTGGAGAACTCGAGTTGCTGCGGATCCACAGTTTCCTTTTAAGGTACTCATGGAGGAACTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCATCCCGCCCGAATTTCGGTCTCAATGAGCTTGATTTCGTCTTCTCCACCCTTGTTGTCGGATCTATATTGAATTTTACTCTCATGTATCTGTTGGCTCCCACTGCATCAGCTGGTGTAGCAGCCAAACAGCTTCCTGCAATCTTTGGAAGCTGCCCCACGAGTCACATGTTCGAACCTGGTGCTTTCACGGTCTTAGAACGATTGGGAACCTTGGTTTACAAAGGAACTGTCTTCGCCACGGTTGGACTAGCAGCTGGGCTCGTAGGAACTGCACTCTCGAATGGCTTGATCAAGCTGAGGAAGAAGATGGATCCTGAATTCGAGACGCCAAACAAGGCACCTCCCACATTGTTGAACGCCATGACATGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAATCTTTGAATGGACTCGAATTCGTGTTGGCCAAGGGGCTTCCCCCTCTGGCATTCAAGAGCTCCGTGGTGGTGTTGAGATGTTTGAACAACATTCTCGGGGGAATGTCCTTCGTGATCCTCGCAAGGATGACGGGATCACAGAGCGTCGAGGAAGCTAAGCCAGCAGCACTGGATTTGGACGCCGCTGATACTAAAGAGAAGCTGTTGGAAGGGGATAAAGATGAGGAGTTAAAGTAA

mRNA sequence

ATGGCTTTGAGAATATTTCTCCCACTACAGTCCTCCGCTCTACCAACTGAGCTAAGTACCGTTCTTCACCCGTTTCCGCCACCAACTCCTCCCTCCCTTCTCCTCTCCATTTTTGGCTGCGCCAATTCACCTCCTGTCGTGATTCTTCTCTTTTTCAAGCTTTCAGGAATTGGGGGTTATTATAATGTTCCCCGTAGTCATGCTTATAACGATCCTCCGGCTTTCTCTTTTCTGTCTAATTCGTCGGCGGTAGAATCGAGGAGTCGATCTCTTTCTCTTTTTAATGCGGACTTAACGAGGTCTAGGTTTTTGGTGAAATCTGAACTCTCTCTTGCTGGTGGCGACGGTGGAAATGGCGTTGGCCGCGGTGGAGGAGGTGGCGGCGGTGGTGGTGACAGTGGTGGTTGGAGCGATGATCGGGCTGATGGGGATGATTCGTCGAGTTTTGGAGTGTTTGGATTGTTTCTTCAAGGGTGGAGAACTCGAGTTGCTGCGGATCCACAGTTTCCTTTTAAGGTACTCATGGAGGAACTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCATCCCGCCCGAATTTCGGTCTCAATGAGCTTGATTTCGTCTTCTCCACCCTTGTTGTCGGATCTATATTGAATTTTACTCTCATGTATCTGTTGGCTCCCACTGCATCAGCTGGTGTAGCAGCCAAACAGCTTCCTGCAATCTTTGGAAGCTGCCCCACGAGTCACATGTTCGAACCTGGTGCTTTCACGGTCTTAGAACGATTGGGAACCTTGGTTTACAAAGGAACTGTCTTCGCCACGGTTGGACTAGCAGCTGGGCTCGTAGGAACTGCACTCTCGAATGGCTTGATCAAGCTGAGGAAGAAGATGGATCCTGAATTCGAGACGCCAAACAAGGCACCTCCCACATTGTTGAACGCCATGACATGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAATCTTTGAATGGACTCGAATTCGTGTTGGCCAAGGGGCTTCCCCCTCTGGCATTCAAGAGCTCCGTGGTGGTGTTGAGATGTTTGAACAACATTCTCGGGGGAATGTCCTTCGTGATCCTCGCAAGGATGACGGGATCACAGAGCGTCGAGGAAGCTAAGCCAGCAGCACTGGATTTGGACGCCGCTGATACTAAAGAGAAGCTGTTGGAAGGGGATAAAGATGAGGAGTTAAAGTAA

Coding sequence (CDS)

ATGGCTTTGAGAATATTTCTCCCACTACAGTCCTCCGCTCTACCAACTGAGCTAAGTACCGTTCTTCACCCGTTTCCGCCACCAACTCCTCCCTCCCTTCTCCTCTCCATTTTTGGCTGCGCCAATTCACCTCCTGTCGTGATTCTTCTCTTTTTCAAGCTTTCAGGAATTGGGGGTTATTATAATGTTCCCCGTAGTCATGCTTATAACGATCCTCCGGCTTTCTCTTTTCTGTCTAATTCGTCGGCGGTAGAATCGAGGAGTCGATCTCTTTCTCTTTTTAATGCGGACTTAACGAGGTCTAGGTTTTTGGTGAAATCTGAACTCTCTCTTGCTGGTGGCGACGGTGGAAATGGCGTTGGCCGCGGTGGAGGAGGTGGCGGCGGTGGTGGTGACAGTGGTGGTTGGAGCGATGATCGGGCTGATGGGGATGATTCGTCGAGTTTTGGAGTGTTTGGATTGTTTCTTCAAGGGTGGAGAACTCGAGTTGCTGCGGATCCACAGTTTCCTTTTAAGGTACTCATGGAGGAACTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCATCCCGCCCGAATTTCGGTCTCAATGAGCTTGATTTCGTCTTCTCCACCCTTGTTGTCGGATCTATATTGAATTTTACTCTCATGTATCTGTTGGCTCCCACTGCATCAGCTGGTGTAGCAGCCAAACAGCTTCCTGCAATCTTTGGAAGCTGCCCCACGAGTCACATGTTCGAACCTGGTGCTTTCACGGTCTTAGAACGATTGGGAACCTTGGTTTACAAAGGAACTGTCTTCGCCACGGTTGGACTAGCAGCTGGGCTCGTAGGAACTGCACTCTCGAATGGCTTGATCAAGCTGAGGAAGAAGATGGATCCTGAATTCGAGACGCCAAACAAGGCACCTCCCACATTGTTGAACGCCATGACATGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAATCTTTGAATGGACTCGAATTCGTGTTGGCCAAGGGGCTTCCCCCTCTGGCATTCAAGAGCTCCGTGGTGGTGTTGAGATGTTTGAACAACATTCTCGGGGGAATGTCCTTCGTGATCCTCGCAAGGATGACGGGATCACAGAGCGTCGAGGAAGCTAAGCCAGCAGCACTGGATTTGGACGCCGCTGATACTAAAGAGAAGCTGTTGGAAGGGGATAAAGATGAGGAGTTAAAGTAA

Protein sequence

MALRIFLPLQSSALPTELSTVLHPFPPPTPPSLLLSIFGCANSPPVVILLFFKLSGIGGYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK

Homology

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BLAST of Csor.00g127610 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.0e-104
Identity = 196/267 (73.41%), Postives = 227/267 (85.02%), Query Frame = 0


Query: 112 AGGDGGNGVGRGGGGGGGGGDSGGWSDDRAD-GDDSSSFGVFGLFLQGWRTRVAADPQFP 171
           AGG GG   G  GGG G GG  GG+     +  ++SS +G  GLF+QGWR+RVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 172 FKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVA 231
           FKVLMEE+VG+SACVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTA+   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 232 AKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLR 291
           ++ LP IF +CP+SHMFE G+FTV+ R GTLVYKG VFA+VGLAAGLVGTA+SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 292 KKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVV 351
           KKMDP FETPNK PPT+LN++TWA HMGVS+N RYQ+LNG+EF+LAK LPPL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 352 LRCLNNILGGMSFVILARMTGSQSVEE 378
           LRC NN+ GGMSFV+LARMTGSQSVEE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVEE 326

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BLAST of Csor.00g127610 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 8.9e-101
Identity = 203/307 (66.12%), Postives = 240/307 (78.18%), Query Frame = 0


Query: 87  RSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDDS 146
           R+ S+S  + + +    +V      AGG GG  +G  GGG G GG  GG+    ++ ++S
Sbjct: 39  RNGSVSSLHTNFSSPNIMV----PCAGGGGGGSIGNHGGGSGSGGGGGGYGG--SEEEES 98

Query: 147 SSFGVFGLFLQGWRTRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFST 206
           S +G  GLF+QGWR+RVAAD QFPFKVLME LVGVSA VLGDMASRPNFGLNELDFVFST
Sbjct: 99  SPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFST 158

Query: 207 LVVGSILNFTLMYLLAPTASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGT 266
           LVVGSILNFTLMYLLAP+A +  ++  LP IF SCP+SHMFE G FT++ R GTLVYKG 
Sbjct: 159 LVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGM 218

Query: 267 VFATVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQ 326
           VFATVGLAAGLVGTA+SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RYQ
Sbjct: 219 VFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQ 278

Query: 327 SLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSVEEAKPAALDLD 386
           +LNG EF+L K LPPL FK+SV+ LR +NN+LGGMSFV LARMTGSQSVEE K   +++ 
Sbjct: 279 TLNGAEFLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEMS 337

Query: 387 AADTKEK 394
               KEK
Sbjct: 339 EISEKEK 337

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BLAST of Csor.00g127610 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.3e-22
Identity = 107/325 (32.92%), Postives = 152/325 (46.77%), Query Frame = 0


Query: 114 GDGGNGV-GRGGGGGGG-GGDSGGWSDD-------------------RADG--------- 173
           GDG NG  G GGGGGGG GG+  G  +D                    A G         
Sbjct: 112 GDGFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLE 171

Query: 174 ----------------DDSSSFGVFGLFLQGW---RTRVAADPQFPFKVLMEELVGVSAC 233
                           D  SS G+ G  ++ W   R R+ ADP F FK+  E ++     
Sbjct: 172 AAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCA 231

Query: 234 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTASAGVAAKQLPAI 293
            + ++  R      E +   + L+VG+++N  L+ +LA       P+AS G   + + A 
Sbjct: 232 TVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA- 291

Query: 294 FGSCPTSHMFE---PGA-FTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKM 353
           + + P+S +FE   PG  F+  +RL T  YKG ++  VG   G+VG  ++N LI   K+ 
Sbjct: 292 YNALPSS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIAN-LIMTAKRN 351

Query: 354 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVL-----AKGLPPLAFKSSV 374
             + E     PP + +A  W + + VSSN RYQ +NGLE V+     AK  PP A   +V
Sbjct: 352 INKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTV 411

[Close]

BLAST of Csor.00g127610 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.1e-21
Identity = 109/325 (33.54%), Postives = 154/325 (47.38%), Query Frame = 0


Query: 113 GGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDD--------------------------- 172
           GG+GGNG G GGGGG G GD G    D+A+  +                           
Sbjct: 113 GGNGGNGDG-GGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLE 172

Query: 173 -SSSFGVFGLF------LQG--W------------RTRVAADPQFPFKVLMEELVGVSAC 232
            + S G+  LF      LQG  W            R R+ ADP F FKV  E  +     
Sbjct: 173 AAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCA 232

Query: 233 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAG---VAA----KQLPAI 292
              ++  R     +E +   + L+VG +++  L+ LLAP A  G   VA+    K L   
Sbjct: 233 TFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRA 292

Query: 293 FGSCPTSHMFE---PGA-FTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKM 352
             S P+S +FE   PG  F+V +R+ T  YKG ++ +VG   GL+G  ++N LI   K+ 
Sbjct: 293 CASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRS 352

Query: 353 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVL-----AKGLPPLAFKSSV 374
             + E     PP   +A  W + +G+SSN RYQ +NGLE V+     AK +P +A   +V
Sbjct: 353 VKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTV 412

[Close]

BLAST of Csor.00g127610 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.6e-17
Identity = 104/363 (28.65%), Postives = 157/363 (43.25%), Query Frame = 0


Query: 74  AFSFLSNSSAVES--RSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGVGRGGGGGGGGG 133
           +F  LS+SS+      ++S+S FN      R  +   LS + G+GG+    GG  GGGGG
Sbjct: 29  SFPRLSSSSSFNGVISAKSIS-FN-----RRVPITPVLSASSGNGGSDNNGGGLSGGGGG 88

Query: 134 DSGGWSDDRADGDDSSS----------------------------------FGVFGLFLQ 193
             GG +D    GD+                                       V   FL+
Sbjct: 89  GDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLE 148

Query: 194 --------------GWRTRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFV 253
                         G+R R+ AD  F  K+ ME  VG+      +   R     NEL+ V
Sbjct: 149 LQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVV 208

Query: 254 FSTLVVGSILNFTLMYLLAPTAS----AGVAAKQLPAIFGSCPTSHM---FEPGAFTVLE 313
           F+ + +  I +F L+YL APT S      + A  +   F +CP +         ++T+L+
Sbjct: 209 FADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQ 268

Query: 314 RLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIH 373
           RLG +   G     VG  + LVGTA++N  IK RK +D   E   +  P +  ++ + ++
Sbjct: 269 RLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVY 328

[Close]

BLAST of Csor.00g127610 vs. NCBI nr
Match: KAG6595539.1 (Protein RETICULATA-RELATED 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 765 bits (1976), Expect = 2.90e-278
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 1   MALRIFLPLQSSALPTELSTVLHPFPPPTPPSLLLSIFGCANSPPVVILLFFKLSGIGGY 60
           MALRIFLPLQSSALPTELSTVLHPFPPPTPPSLLLSIFGCANSPPVVILLFFKLSGIGGY
Sbjct: 1   MALRIFLPLQSSALPTELSTVLHPFPPPTPPSLLLSIFGCANSPPVVILLFFKLSGIGGY 60

Query: 61  YNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGV 120
           YNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGV
Sbjct: 61  YNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGV 120

Query: 121 GRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELVG 180
           GRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELVG
Sbjct: 121 GRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELVG 180

Query: 181 VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFGS 240
           VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFGS
Sbjct: 181 VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFGS 240

Query: 241 CPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFETP 300
           CPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFETP
Sbjct: 241 CPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFETP 300

Query: 301 NKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGG 360
           NKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGG
Sbjct: 301 NKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGG 360

Query: 361 MSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           MSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK
Sbjct: 361 MSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404

[Close]

BLAST of Csor.00g127610 vs. NCBI nr
Match: KAG7027520.1 (Protein RETICULATA-RELATED 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657 bits (1695), Expect = 3.63e-236
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 59  GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGN 118
           GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGN
Sbjct: 15  GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGN 74

Query: 119 GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL 178
           GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL
Sbjct: 75  GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL 134

Query: 179 VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF 238
           VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF
Sbjct: 135 VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF 194

Query: 239 GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE 298
           GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE
Sbjct: 195 GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE 254

Query: 299 TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL 358
           TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL
Sbjct: 255 TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL 314

Query: 359 GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK
Sbjct: 315 GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 360

[Close]

BLAST of Csor.00g127610 vs. NCBI nr
Match: XP_023517477.1 (protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023517478.1 protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 655 bits (1689), Expect = 2.98e-235
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 60  YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG 119
           YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG
Sbjct: 16  YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG 75

Query: 120 VGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV 179
           VGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV
Sbjct: 76  VGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV 135

Query: 180 GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG 239
           GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG
Sbjct: 136 GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG 195

Query: 240 SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET 299
           SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET
Sbjct: 196 SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET 255

Query: 300 PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG 359
           PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG
Sbjct: 256 PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG 315

Query: 360 GMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           GMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK
Sbjct: 316 GMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 360

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BLAST of Csor.00g127610 vs. NCBI nr
Match: XP_022925241.1 (protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 654 bits (1686), Expect = 8.53e-235
Identity = 345/346 (99.71%), Postives = 345/346 (99.71%), Query Frame = 0


Query: 59  GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGN 118
           GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLF ADLTRSRFLVKSELSLAGGDGGN
Sbjct: 15  GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFIADLTRSRFLVKSELSLAGGDGGN 74

Query: 119 GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL 178
           GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL
Sbjct: 75  GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL 134

Query: 179 VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF 238
           VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF
Sbjct: 135 VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF 194

Query: 239 GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE 298
           GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE
Sbjct: 195 GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE 254

Query: 299 TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL 358
           TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL
Sbjct: 255 TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL 314

Query: 359 GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK
Sbjct: 315 GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 360

[Close]

BLAST of Csor.00g127610 vs. NCBI nr
Match: XP_022966374.1 (protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 647 bits (1668), Expect = 4.71e-232
Identity = 340/345 (98.55%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 60  YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG 119
           YYNVP SHAYN+PPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG
Sbjct: 16  YYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG 75

Query: 120 VGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV 179
           VGRGGGGGGGGGD+GGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV
Sbjct: 76  VGRGGGGGGGGGDNGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV 135

Query: 180 GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG 239
           GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG
Sbjct: 136 GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG 195

Query: 240 SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET 299
           SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET
Sbjct: 196 SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET 255

Query: 300 PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG 359
           PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG
Sbjct: 256 PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG 315

Query: 360 GMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           GMSFVILARMTGSQSVE+AKPAALDLDA DTKEKLLEGDKDEELK
Sbjct: 316 GMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEELK 360

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BLAST of Csor.00g127610 vs. ExPASy TrEMBL
Match: A0A6J1EBN9 (protein RETICULATA-RELATED 3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432542 PE=3 SV=1)

HSP 1 Score: 654 bits (1686), Expect = 4.13e-235
Identity = 345/346 (99.71%), Postives = 345/346 (99.71%), Query Frame = 0


Query: 59  GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGN 118
           GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLF ADLTRSRFLVKSELSLAGGDGGN
Sbjct: 15  GYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFIADLTRSRFLVKSELSLAGGDGGN 74

Query: 119 GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL 178
           GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL
Sbjct: 75  GVGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEEL 134

Query: 179 VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF 238
           VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF
Sbjct: 135 VGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIF 194

Query: 239 GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE 298
           GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE
Sbjct: 195 GSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFE 254

Query: 299 TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL 358
           TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL
Sbjct: 255 TPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNIL 314

Query: 359 GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK
Sbjct: 315 GGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 360

[Close]

BLAST of Csor.00g127610 vs. ExPASy TrEMBL
Match: A0A6J1HTL4 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466041 PE=3 SV=1)

HSP 1 Score: 647 bits (1668), Expect = 2.28e-232
Identity = 340/345 (98.55%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 60  YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG 119
           YYNVP SHAYN+PPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG
Sbjct: 16  YYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGGDGGNG 75

Query: 120 VGRGGGGGGGGGDSGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV 179
           VGRGGGGGGGGGD+GGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV
Sbjct: 76  VGRGGGGGGGGGDNGGWSDDRADGDDSSSFGVFGLFLQGWRTRVAADPQFPFKVLMEELV 135

Query: 180 GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG 239
           GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG
Sbjct: 136 GVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAIFG 195

Query: 240 SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET 299
           SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET
Sbjct: 196 SCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFET 255

Query: 300 PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG 359
           PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG
Sbjct: 256 PNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILG 315

Query: 360 GMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           GMSFVILARMTGSQSVE+AKPAALDLDA DTKEKLLEGDKDEELK
Sbjct: 316 GMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEELK 360

[Close]

BLAST of Csor.00g127610 vs. ExPASy TrEMBL
Match: A0A6J1DQ40 (protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023180 PE=3 SV=1)

HSP 1 Score: 577 bits (1487), Expect = 8.56e-205
Identity = 306/347 (88.18%), Postives = 328/347 (94.52%), Query Frame = 0


Query: 60  YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFLVKSELSLAGG-DGGN 119
           YYNVP +HAYN+ PAFSFLS+SS ++SR+RSLSLF+ DLTR  FL KSELSLAGG DGG+
Sbjct: 16  YYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFLAKSELSLAGGGDGGD 75

Query: 120 GVGRGGGGGGGGGDSGGWSDDRADGDD-SSSFGVFGLFLQGWRTRVAADPQFPFKVLMEE 179
           GVGRGGGGGGGG DSGGWSDDRA GDD SSSFGV GLFL+GWR+RVAADPQFPFKVLMEE
Sbjct: 76  GVGRGGGGGGGG-DSGGWSDDRAHGDDDSSSFGVLGLFLKGWRSRVAADPQFPFKVLMEE 135

Query: 180 LVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLPAI 239
           LVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTA+AGVAAKQLPAI
Sbjct: 136 LVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGVAAKQLPAI 195

Query: 240 FGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEF 299
           F SCPTSHMFEPGAFTVL+RLGT VYKGTVFA VGLAAGLVGTALSNGLIKLRKKMDPEF
Sbjct: 196 FSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKMDPEF 255

Query: 300 ETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLNNI 359
           ETPNKAPPTLLNA+TWAIHMGVSSNLRYQ+LNG+EFVLAKGLPPLAFKSSVVVLRCLNN+
Sbjct: 256 ETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPLAFKSSVVVLRCLNNV 315

Query: 360 LGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           LGG+SFVILAR TGSQS+E+ K AA++LD+AD KEKLLEGDKDEELK
Sbjct: 316 LGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEELK 361

[Close]

BLAST of Csor.00g127610 vs. ExPASy TrEMBL
Match: A0A0A0L080 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1)

HSP 1 Score: 560 bits (1444), Expect = 4.16e-198
Identity = 298/349 (85.39%), Postives = 322/349 (92.26%), Query Frame = 0


Query: 60  YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSL--FNADLTRSRFLVKSELSLAGGDGG 119
           YY+VP +H +N+ PAFSFLSNSSAVESRSRSLSL  FNADLTR  FL KSELSLAGGDGG
Sbjct: 16  YYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPSFLAKSELSLAGGDGG 75

Query: 120 NGVGRGGGGGGGGGDSGGWSDDRADGDD--SSSFGVFGLFLQGWRTRVAADPQFPFKVLM 179
           NGVG GG GGGGGGD GGWSDDR  GDD  SSSFGV GLFL+GWR+RVAADPQFPFKVLM
Sbjct: 76  NGVGHGGRGGGGGGD-GGWSDDRTHGDDDDSSSFGVLGLFLKGWRSRVAADPQFPFKVLM 135

Query: 180 EELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLP 239
           EELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTA+AGVAA++LP
Sbjct: 136 EELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGVAAQRLP 195

Query: 240 AIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDP 299
           +IF SCPTSHMFEPGAFT+L+R+GT VYKGTVFA VGLAAGLVGTALSNGLI LRKKMDP
Sbjct: 196 SIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTALSNGLIMLRKKMDP 255

Query: 300 EFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLN 359
            FETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNG+E+VLAKGLPPLAFKSSVVVLRCLN
Sbjct: 256 GFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVVLRCLN 315

Query: 360 NILGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           N+LGGMSFV+LARMTGSQSVE  K A ++LD+ D KEKLLEGDK+EEL+
Sbjct: 316 NVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEEELR 363

[Close]

BLAST of Csor.00g127610 vs. ExPASy TrEMBL
Match: A0A1S3CIX7 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501484 PE=3 SV=1)

HSP 1 Score: 560 bits (1442), Expect = 8.37e-198
Identity = 297/349 (85.10%), Postives = 319/349 (91.40%), Query Frame = 0


Query: 60  YYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSL--FNADLTRSRFLVKSELSLAGGDGG 119
           YYNVP +H +N+ PAFSFLSNSS VESRSRSLSL  FNADLTR  +L KSELSLAGGDGG
Sbjct: 16  YYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRSYLAKSELSLAGGDGG 75

Query: 120 NGVGRGGGGGGGGGDSGGWSDDRADGDD--SSSFGVFGLFLQGWRTRVAADPQFPFKVLM 179
           NGVG GG GGGGGGD GGWSDDR  GDD  SSSFGV GLFL+GWR+RVAADPQFPFKVLM
Sbjct: 76  NGVGHGGKGGGGGGD-GGWSDDRTHGDDDDSSSFGVLGLFLKGWRSRVAADPQFPFKVLM 135

Query: 180 EELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVAAKQLP 239
           EELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTA+AG  AKQLP
Sbjct: 136 EELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAVAKQLP 195

Query: 240 AIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDP 299
           +IF SCPTSHMFEPGAFT+L+RLGT VYKGTVFA VGLAAGLVGTALSNGLI LRKKMDP
Sbjct: 196 SIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIMLRKKMDP 255

Query: 300 EFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVVLRCLN 359
            FETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNG+E+VLAKGLPPLAFKSSVVVLRCLN
Sbjct: 256 GFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVVLRCLN 315

Query: 360 NILGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEELK 404
           N+LGGMSFV+LAR+TGSQSVE  K A ++LD+ D KEKLLEGDK+EEL+
Sbjct: 316 NVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEEELR 363

[Close]

BLAST of Csor.00g127610 vs. TAIR 10
Match: AT3G08640.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 380.2 bits (975), Expect = 2.1e-105
Identity = 196/267 (73.41%), Postives = 227/267 (85.02%), Query Frame = 0


Query: 112 AGGDGGNGVGRGGGGGGGGGDSGGWSDDRAD-GDDSSSFGVFGLFLQGWRTRVAADPQFP 171
           AGG GG   G  GGG G GG  GG+     +  ++SS +G  GLF+QGWR+RVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 172 FKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGVA 231
           FKVLMEE+VG+SACVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTA+   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 232 AKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLR 291
           ++ LP IF +CP+SHMFE G+FTV+ R GTLVYKG VFA+VGLAAGLVGTA+SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 292 KKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLAFKSSVVV 351
           KKMDP FETPNK PPT+LN++TWA HMGVS+N RYQ+LNG+EF+LAK LPPL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 352 LRCLNNILGGMSFVILARMTGSQSVEE 378
           LRC NN+ GGMSFV+LARMTGSQSVEE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVEE 326

[Close]

BLAST of Csor.00g127610 vs. TAIR 10
Match: AT3G08630.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 368.6 bits (945), Expect = 6.3e-102
Identity = 203/307 (66.12%), Postives = 240/307 (78.18%), Query Frame = 0


Query: 87  RSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDDS 146
           R+ S+S  + + +    +V      AGG GG  +G  GGG G GG  GG+    ++ ++S
Sbjct: 39  RNGSVSSLHTNFSSPNIMV----PCAGGGGGGSIGNHGGGSGSGGGGGGYGG--SEEEES 98

Query: 147 SSFGVFGLFLQGWRTRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFST 206
           S +G  GLF+QGWR+RVAAD QFPFKVLME LVGVSA VLGDMASRPNFGLNELDFVFST
Sbjct: 99  SPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFST 158

Query: 207 LVVGSILNFTLMYLLAPTASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGT 266
           LVVGSILNFTLMYLLAP+A +  ++  LP IF SCP+SHMFE G FT++ R GTLVYKG 
Sbjct: 159 LVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGM 218

Query: 267 VFATVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQ 326
           VFATVGLAAGLVGTA+SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RYQ
Sbjct: 219 VFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQ 278

Query: 327 SLNGLEFVLAKGLPPLAFKSSVVVLRCLNNILGGMSFVILARMTGSQSVEEAKPAALDLD 386
           +LNG EF+L K LPPL FK+SV+ LR +NN+LGGMSFV LARMTGSQSVEE K   +++ 
Sbjct: 279 TLNGAEFLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEMS 337

Query: 387 AADTKEK 394
               KEK
Sbjct: 339 EISEKEK 337

[Close]

BLAST of Csor.00g127610 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 106.7 bits (265), Expect = 4.5e-23
Identity = 107/325 (32.92%), Postives = 152/325 (46.77%), Query Frame = 0


Query: 114 GDGGNGV-GRGGGGGGG-GGDSGGWSDD-------------------RADG--------- 173
           GDG NG  G GGGGGGG GG+  G  +D                    A G         
Sbjct: 112 GDGFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLE 171

Query: 174 ----------------DDSSSFGVFGLFLQGW---RTRVAADPQFPFKVLMEELVGVSAC 233
                           D  SS G+ G  ++ W   R R+ ADP F FK+  E ++     
Sbjct: 172 AAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCA 231

Query: 234 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTASAGVAAKQLPAI 293
            + ++  R      E +   + L+VG+++N  L+ +LA       P+AS G   + + A 
Sbjct: 232 TVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA- 291

Query: 294 FGSCPTSHMFE---PGA-FTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKM 353
           + + P+S +FE   PG  F+  +RL T  YKG ++  VG   G+VG  ++N LI   K+ 
Sbjct: 292 YNALPSS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIAN-LIMTAKRN 351

Query: 354 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVL-----AKGLPPLAFKSSV 374
             + E     PP + +A  W + + VSSN RYQ +NGLE V+     AK  PP A   +V
Sbjct: 352 INKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTV 411

[Close]

BLAST of Csor.00g127610 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-22
Identity = 109/325 (33.54%), Postives = 154/325 (47.38%), Query Frame = 0


Query: 113 GGDGGNGVGRGGGGGGGGGDSGGWSDDRADGDD--------------------------- 172
           GG+GGNG G GGGGG G GD G    D+A+  +                           
Sbjct: 113 GGNGGNGDG-GGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLE 172

Query: 173 -SSSFGVFGLF------LQG--W------------RTRVAADPQFPFKVLMEELVGVSAC 232
            + S G+  LF      LQG  W            R R+ ADP F FKV  E  +     
Sbjct: 173 AAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCA 232

Query: 233 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAG---VAA----KQLPAI 292
              ++  R     +E +   + L+VG +++  L+ LLAP A  G   VA+    K L   
Sbjct: 233 TFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRA 292

Query: 293 FGSCPTSHMFE---PGA-FTVLERLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKM 352
             S P+S +FE   PG  F+V +R+ T  YKG ++ +VG   GL+G  ++N LI   K+ 
Sbjct: 293 CASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRS 352

Query: 353 DPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVL-----AKGLPPLAFKSSV 374
             + E     PP   +A  W + +G+SSN RYQ +NGLE V+     AK +P +A   +V
Sbjct: 353 VKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTV 412

[Close]

BLAST of Csor.00g127610 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 90.9 bits (224), Expect = 2.5e-18
Identity = 104/363 (28.65%), Postives = 157/363 (43.25%), Query Frame = 0


Query: 74  AFSFLSNSSAVES--RSRSLSLFNADLTRSRFLVKSELSLAGGDGGNGVGRGGGGGGGGG 133
           +F  LS+SS+      ++S+S FN      R  +   LS + G+GG+    GG  GGGGG
Sbjct: 29  SFPRLSSSSSFNGVISAKSIS-FN-----RRVPITPVLSASSGNGGSDNNGGGLSGGGGG 88

Query: 134 DSGGWSDDRADGDDSSS----------------------------------FGVFGLFLQ 193
             GG +D    GD+                                       V   FL+
Sbjct: 89  GDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLE 148

Query: 194 --------------GWRTRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFV 253
                         G+R R+ AD  F  K+ ME  VG+      +   R     NEL+ V
Sbjct: 149 LQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVV 208

Query: 254 FSTLVVGSILNFTLMYLLAPTAS----AGVAAKQLPAIFGSCPTSHM---FEPGAFTVLE 313
           F+ + +  I +F L+YL APT S      + A  +   F +CP +         ++T+L+
Sbjct: 209 FADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQ 268

Query: 314 RLGTLVYKGTVFATVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIH 373
           RLG +   G     VG  + LVGTA++N  IK RK +D   E   +  P +  ++ + ++
Sbjct: 269 RLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVY 328

The following BLAST results are available for this feature:

BLAST of Csor.00g127610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9Z2	3.0e-104	73.41	Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z3	8.9e-101	66.12	Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	6.3e-22	32.92	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q9FGP9	4.1e-21	33.54	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q94CJ5	3.6e-17	28.65	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of Csor.00g127610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595539.1	2.90e-278	100.00	Protein RETICULATA-RELATED 3, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
KAG7027520.1	3.63e-236	100.00	Protein RETICULATA-RELATED 3, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_023517477.1	2.98e-235	100.00	protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >X...	[more]
XP_022925241.1	8.53e-235	99.71	protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita moschata]	[more]
XP_022966374.1	4.71e-232	98.55	protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima]	[more]

BLAST of Csor.00g127610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBN9	4.13e-235	99.71	protein RETICULATA-RELATED 3, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1HTL4	2.28e-232	98.55	protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1DQ40	8.56e-205	88.18	protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0L080	4.16e-198	85.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1	[more]
A0A1S3CIX7	8.37e-198	85.10	protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501...	[more]

BLAST of Csor.00g127610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08640.1	2.1e-105	73.41	Protein of unknown function (DUF3411)	[more]
AT3G08630.1	6.3e-102	66.12	Protein of unknown function (DUF3411)	[more]
AT2G37860.3	4.5e-23	32.92	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	2.9e-22	33.54	reticulata-related 1	[more]
AT5G12470.1	2.5e-18	28.65	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 162..331 e-value: 1.3E-65 score: 220.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..139
None	No IPR available	PANTHER	PTHR31620:SF17	PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE	coord: 97..386
None	No IPR available	PANTHER	PTHR31620	PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED	coord: 97..386

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g127610.m01	Csor.00g127610.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane