Csor.00g125390 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTATTCCACGGCTAACCTATTCATTGTTATTTTGGTAGCATCCATTGCTCTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGGCCCTTCTCCTCTGCCGCCGCCGATATACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTATATCAAAATTAGCCTTGAAGGGAAGGCAGGCCCTGTAGTGGAAAATGGAGAGGATGAATCTGAACCACCACCACCATCATCCAAGGTTAGAAGGGGCCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG ATGGGGTATTCCACGGCTAACCTATTCATTGTTATTTTGGTAGCATCCATTGCTCTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGGCCCTTCTCCTCTGCCGCCGCCGATATACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTATATCAAAATTAGCCTTGAAGGGAAGGCAGGCCCTGTAGTGGAAAATGGAGAGGATGAATCTGAACCACCACCACCATCATCCAAGGTTAGAAGGGGCCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG ATGGGGTATTCCACGGCTAACCTATTCATTGTTATTTTGGTAGCATCCATTGCTCTAAGGCCACCGTCGGCAACCACCGCAAGCGCCGTCGTTGGCCCTTCTCCTCTGCCGCCGCCGATATACCATTCAGCTTCTGGGACACTATCATTTGGCCGTTATATCAAAATTAGCCTTGAAGGGAAGGCAGGCCCTGTAGTGGAAAATGGAGAGGATGAATCTGAACCACCACCACCATCATCCAAGGTTAGAAGGGGCCCCAGACGACCATGGCCTAAGAAACCTGTCGCCAAATCGCCACCGCCTCCATTTTAG MGYSTANLFIVILVASIALRPPSATTASAVVGPSPLPPPIYHSASGTLSFGRYIKISLEGKAGPVVENGEDESEPPPPSSKVRRGPRRPWPKKPVAKSPPPPF Homology
BLAST of Csor.00g125390 vs. NCBI nr
Match: KAG6578899.1 (hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (502), Expect = 1.47e-63 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of Csor.00g125390 vs. NCBI nr
Match: KAG6578898.1 (hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106 bits (264), Expect = 2.24e-27 Identity = 66/103 (64.08%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Csor.00g125390 vs. NCBI nr
Match: KAA0054914.1 (hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22702.1 hypothetical protein E5676_scaffold1163G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 79.3 bits (194), Expect = 9.35e-17 Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 0
BLAST of Csor.00g125390 vs. NCBI nr
Match: KAE8646678.1 (hypothetical protein Csa_023589, partial [Cucumis sativus]) HSP 1 Score: 63.9 bits (154), Expect = 7.05e-11 Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of Csor.00g125390 vs. NCBI nr
Match: KAE8637368.1 (hypothetical protein CSA_004461, partial [Cucumis sativus]) HSP 1 Score: 59.7 bits (143), Expect = 3.84e-09 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of Csor.00g125390 vs. ExPASy TrEMBL
Match: A0A5A7UIB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00190 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.53e-17 Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 0
BLAST of Csor.00g125390 vs. ExPASy TrEMBL
Match: A0A0A0K9K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.48e-15 Identity = 51/104 (49.04%), Postives = 65/104 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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