Csor.00g124920 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g124920
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionReceptor-like serine/threonine-protein kinase
LocationCsor_Chr15: 2708235 .. 2708636 (+)
RNA-Seq ExpressionCsor.00g124920
SyntenyCsor.00g124920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTCCGTAGCCGTTTATTTTGTTGCATTTCTTTGCTTCTTGCATTTCTAGCTTCTATGTCGGTAGCCGCCATATCTCTAGGTTCATCTTTGAAAGCTTCCGATCCCGACCAGGCGTGGATCTCGCCTGGAGCCATTTTCTCTCTTCGTTTCGTACCATCGGGTTTATCCAGTTCATCTTCTTCTTGTATCGCTGGCATTGTGTACTTTGGTAAAGTTTTTGTCATCTGGTCCGCTGGCGGCGGTGCTCCGGTGGATGCTTCAGGTGCTCTTCACTTTCAATTCGACGGCAACCTTGCCTCGTCAATGGCTCCGGTGCCGTCGTTTGGGAATCTAACACCGCTGGCCGTGGCGTCTCCTCCGCTGTACTCGAGGACTCCGGCAATCTTGTACTTCTAA

mRNA sequence

ATGAACCTCCGTAGCCGTTTATTTTGTTGCATTTCTTTGCTTCTTGCATTTCTAGCTTCTATGTCGGTAGCCGCCATATCTCTAGGTTCATCTTTGAAAGCTTCCGATCCCGACCAGGCGTGGATCTCGCCTGGAGCCATTTTCTCTCTTCGTTTCGTACCATCGGGTTTATCCAGTTCATCTTCTTCTTGTATCGCTGGCATTGTGTACTTTGGTAAAGTTTTTGTCATCTGGTCCGCTGGCGGCGGTGCTCCGGTGGATGCTTCAGGTGCTCTTCACTTTCAATTCGACGGCAACCTTGCCTCGTCAATGGCTCCGGTGCCGTCGTTTGGGAATCTAACACCGCTGGCCGTGGCGTCTCCTCCGCTGTACTCGAGGACTCCGGCAATCTTGTACTTCTAA

Coding sequence (CDS)

ATGAACCTCCGTAGCCGTTTATTTTGTTGCATTTCTTTGCTTCTTGCATTTCTAGCTTCTATGTCGGTAGCCGCCATATCTCTAGGTTCATCTTTGAAAGCTTCCGATCCCGACCAGGCGTGGATCTCGCCTGGAGCCATTTTCTCTCTTCGTTTCGTACCATCGGGTTTATCCAGTTCATCTTCTTCTTGTATCGCTGGCATTGTGTACTTTGGTAAAGTTTTTGTCATCTGGTCCGCTGGCGGCGGTGCTCCGGTGGATGCTTCAGGTGCTCTTCACTTTCAATTCGACGGCAACCTTGCCTCGTCAATGGCTCCGGTGCCGTCGTTTGGGAATCTAACACCGCTGGCCGTGGCGTCTCCTCCGCTGTACTCGAGGACTCCGGCAATCTTGTACTTCTAA

Protein sequence

MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSSSSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNLASSMAPVPSFGNLTPLAVASPPLYSRTPAILYF
Homology
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BLAST of Csor.00g124920 vs. ExPASy Swiss-Prot
Match: Q9XID3 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana OX=3702 GN=At1g34300 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-04
Identity = 36/88 (40.91%), Postives = 48/88 (54.55%), Query Frame = 0 

Query: 13  LLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSSSSSSCIAGIVYFG 72
           LLL      S + I LGS + AS  +Q W SP + FS+ FVP   S S +S +A + + G
Sbjct: 14  LLLLLHFPFSFSTIPLGSVIYASGSNQNWPSPNSTFSVSFVP---SPSPNSFLAAVSFAG 73

Query: 73  KVFVIWSAGGGAPVDASGALHFQFDGNL 101
            V  IWSAG    VD+ G+L     G+L
Sbjct: 74  SV-PIWSAG---TVDSRGSLRLHTSGSL 94

[Close]
BLAST of Csor.00g124920 vs. NCBI nr
Match: KAG6578852.1 (hypothetical protein SDJN03_23300, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256 bits (655), Expect = 6.20e-86
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSSS 60
           MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSSS
Sbjct: 1   MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSSS 60

Query: 61  SSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNLASSMAPVPSFGNLTPLAVAS 120
           SSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNLASSMAPVPSFGNLTPLAVAS
Sbjct: 61  SSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNLASSMAPVPSFGNLTPLAVAS 120

Query: 121 PPLYSRTPAILYF 133
           PPLYSRTPAILYF
Sbjct: 121 PPLYSRTPAILYF 133

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BLAST of Csor.00g124920 vs. NCBI nr
Match: XP_023550420.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 113 bits (282), Expect = 5.43e-26
Identity = 67/101 (66.34%), Postives = 77/101 (76.24%), Query Frame = 0 

Query: 1   MNLRSRLF-CCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           M+LRS LF  CI+L+L F  S+SVAAISLGSSL+AS+P+Q W S    FSLRF P+   S
Sbjct: 1   MDLRSHLFRYCIALVLCFSVSLSVAAISLGSSLRASNPNQTWDSANGDFSLRFHPA--DS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           S SS IAGIV+ G V  IWSAGGGA +DASGALHFQ DGNL
Sbjct: 61  SGSSFIAGIVFTGGVPTIWSAGGGATLDASGALHFQSDGNL 99

[Close]
BLAST of Csor.00g124920 vs. NCBI nr
Match: XP_022992644.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita maxima] >XP_022992645.1 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita maxima])

HSP 1 Score: 110 bits (274), Expect = 6.50e-25
Identity = 66/101 (65.35%), Postives = 76/101 (75.25%), Query Frame = 0 

Query: 1   MNLRSRLF-CCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           M+L S LF   I+L+L    S+SVAAISLGSSL+AS+P+Q W S   IFSLRF+P+   S
Sbjct: 1   MDLHSHLFRYFIALVLCLSVSLSVAAISLGSSLRASNPNQTWDSANGIFSLRFLPA--DS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           S SS IAGIV+ G V  IWSAGGGA VDASGALHFQ DGNL
Sbjct: 61  SGSSFIAGIVFTGGVPTIWSAGGGATVDASGALHFQSDGNL 99

[Close]
BLAST of Csor.00g124920 vs. NCBI nr
Match: XP_022133877.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordica charantia])

HSP 1 Score: 106 bits (264), Expect = 1.45e-23
Identity = 66/101 (65.35%), Postives = 70/101 (69.31%), Query Frame = 0 

Query: 1   MNLRSRLFCC-ISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           MNL S L    + LLL    S S AAISLGSSLKAS+ +QAW S    FS  F PSG+SS
Sbjct: 7   MNLHSHLVVFFLPLLLLLSISSSAAAISLGSSLKASNLEQAWNSSNGDFSFGFRPSGVSS 66

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           SS S IAGIVY G V  IWSAGGGA VDASGALHF  DGNL
Sbjct: 67  SSPSFIAGIVYTGGVPTIWSAGGGAAVDASGALHFDSDGNL 107

[Close]
BLAST of Csor.00g124920 vs. NCBI nr
Match: XP_022939715.1 (G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbita moschata])

HSP 1 Score: 105 bits (261), Expect = 3.67e-23
Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 0 

Query: 1   MNLRSRLFCC-ISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           M+LRS LF   I+L+L    S+SVAAISLGSSL+AS+ +Q W S    FSLRF P  + S
Sbjct: 1   MDLRSHLFLYFIALVLCLSVSLSVAAISLGSSLRASNSNQTWDSANGDFSLRFHP--VDS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           S SS IAGIV+ G V  IWSAGGGA VDASGALHFQ DGNL
Sbjct: 61  SGSSFIAGIVFTGGVPTIWSAGGGATVDASGALHFQSDGNL 99

[Close]
BLAST of Csor.00g124920 vs. ExPASy TrEMBL
Match: A0A6J1JY39 (Receptor-like serine/threonine-protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111488931 PE=3 SV=1)

HSP 1 Score: 110 bits (274), Expect = 3.15e-25
Identity = 66/101 (65.35%), Postives = 76/101 (75.25%), Query Frame = 0 

Query: 1   MNLRSRLF-CCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           M+L S LF   I+L+L    S+SVAAISLGSSL+AS+P+Q W S   IFSLRF+P+   S
Sbjct: 1   MDLHSHLFRYFIALVLCLSVSLSVAAISLGSSLRASNPNQTWDSANGIFSLRFLPA--DS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           S SS IAGIV+ G V  IWSAGGGA VDASGALHFQ DGNL
Sbjct: 61  SGSSFIAGIVFTGGVPTIWSAGGGATVDASGALHFQSDGNL 99

[Close]
BLAST of Csor.00g124920 vs. ExPASy TrEMBL
Match: A0A6J1BY04 (Receptor-like serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=LOC111006322 PE=3 SV=1)

HSP 1 Score: 106 bits (264), Expect = 7.01e-24
Identity = 66/101 (65.35%), Postives = 70/101 (69.31%), Query Frame = 0 

Query: 1   MNLRSRLFCC-ISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           MNL S L    + LLL    S S AAISLGSSLKAS+ +QAW S    FS  F PSG+SS
Sbjct: 7   MNLHSHLVVFFLPLLLLLSISSSAAAISLGSSLKASNLEQAWNSSNGDFSFGFRPSGVSS 66

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           SS S IAGIVY G V  IWSAGGGA VDASGALHF  DGNL
Sbjct: 67  SSPSFIAGIVYTGGVPTIWSAGGGAAVDASGALHFDSDGNL 107

[Close]
BLAST of Csor.00g124920 vs. ExPASy TrEMBL
Match: A0A6J1FNI6 (Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111445519 PE=3 SV=1)

HSP 1 Score: 105 bits (261), Expect = 1.78e-23
Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 0 

Query: 1   MNLRSRLFCC-ISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           M+LRS LF   I+L+L    S+SVAAISLGSSL+AS+ +Q W S    FSLRF P  + S
Sbjct: 1   MDLRSHLFLYFIALVLCLSVSLSVAAISLGSSLRASNSNQTWDSANGDFSLRFHP--VDS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           S SS IAGIV+ G V  IWSAGGGA VDASGALHFQ DGNL
Sbjct: 61  SGSSFIAGIVFTGGVPTIWSAGGGATVDASGALHFQSDGNL 99

[Close]
BLAST of Csor.00g124920 vs. ExPASy TrEMBL
Match: A0A6J1BWE3 (Receptor-like serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=LOC111006321 PE=3 SV=1)

HSP 1 Score: 103 bits (257), Expect = 6.14e-23
Identity = 66/101 (65.35%), Postives = 72/101 (71.29%), Query Frame = 0 

Query: 1   MNLRSRLFCCI-SLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSS 60
           MNL  RLF CI  LLLAF  S+  AAISLGSSL+ S+PDQAW S  A FSLRF+PS +SS
Sbjct: 1   MNLHWRLFLCILPLLLAFPVSVLAAAISLGSSLRVSNPDQAWSSSNATFSLRFIPSSVSS 60

Query: 61  SSSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           SS S IAGIVY G V   W A     VD+SGALHFQ DGNL
Sbjct: 61  SSPSFIAGIVYSG-VRRRWXA----TVDSSGALHFQSDGNL 96

[Close]
BLAST of Csor.00g124920 vs. ExPASy TrEMBL
Match: A0A0A0KCI5 (Receptor-like serine/threonine-protein kinase OS=Cucumis sativus OX=3659 GN=Csa_6G052130 PE=3 SV=1)

HSP 1 Score: 100 bits (248), Expect = 9.86e-22
Identity = 61/100 (61.00%), Postives = 67/100 (67.00%), Query Frame = 0 

Query: 1   MNLRSRLFCCISLLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSSS 60
           MN  + LF C  +  AF  S S AAI+LGSSL+ASDP+QAW S    FSL F P G    
Sbjct: 1   MNFHTHLFPCF-IAFAFAVSFSEAAITLGSSLRASDPNQAWNSSNGDFSLSFTPLG---- 60

Query: 61  SSSCIAGIVYFGKVFVIWSAGGGAPVDASGALHFQFDGNL 100
           SSS  AGIV+ G V  IWSAGGGA VDAS ALHFQ DGNL
Sbjct: 61  SSSFKAGIVFTGGVPTIWSAGGGATVDASSALHFQSDGNL 95

[Close]
BLAST of Csor.00g124920 vs. TAIR 10
Match: AT1G34300.1 (lectin protein kinase family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-05
Identity = 36/88 (40.91%), Postives = 48/88 (54.55%), Query Frame = 0 

Query: 13  LLLAFLASMSVAAISLGSSLKASDPDQAWISPGAIFSLRFVPSGLSSSSSSCIAGIVYFG 72
           LLL      S + I LGS + AS  +Q W SP + FS+ FVP   S S +S +A + + G
Sbjct: 14  LLLLLHFPFSFSTIPLGSVIYASGSNQNWPSPNSTFSVSFVP---SPSPNSFLAAVSFAG 73

Query: 73  KVFVIWSAGGGAPVDASGALHFQFDGNL 101
            V  IWSAG    VD+ G+L     G+L
Sbjct: 74  SV-PIWSAG---TVDSRGSLRLHTSGSL 94

The following BLAST results are available for this feature:
BLAST of Csor.00g124920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XID31.5e-0440.91G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabi... [more]
BLAST of Csor.00g124920 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6578852.16.20e-86100.00hypothetical protein SDJN03_23300, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023550420.15.43e-2666.34G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbi... [more]
XP_022992644.16.50e-2565.35G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbi... [more]
XP_022133877.11.45e-2365.35G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Momordi... [more]
XP_022939715.13.67e-2364.36G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Cucurbi... [more]
BLAST of Csor.00g124920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JY393.15e-2565.35Receptor-like serine/threonine-protein kinase OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1BY047.01e-2465.35Receptor-like serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1FNI61.78e-2364.36Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1BWE36.14e-2365.35Receptor-like serine/threonine-protein kinase OS=Momordica charantia OX=3673 GN=... [more]
A0A0A0KCI59.86e-2261.00Receptor-like serine/threonine-protein kinase OS=Cucumis sativus OX=3659 GN=Csa_... [more]
BLAST of Csor.00g124920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G34300.11.1e-0540.91lectin protein kinase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g124920.m01Csor.00g124920.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
cellular_component GO:0016020 membrane
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004672 protein kinase activity