Csor.00g124360 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g124360
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionSHUGOSHIN 2-like isoform X1
LocationCsor_Chr15: 2336388 .. 2343903 (-)
RNA-Seq ExpressionCsor.00g124360
SyntenyCsor.00g124360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCCCCCCCGTTGCCCTCAGGCAGGCGCATCACCTTCCGTTCGTGGGTGGCGAGAAGTTAGGTTTTGGTTTTTTTGGAGAATGCGTGGATTTCCGGATAAGAATCCCTCATTATATGCCGGCGTCCCCCCGATTAAGTGCCGTATCGTAGTCAGGTATGGTAGGAATGTAACGCAGAGTGTGGAGCAAATGATCGGATTCCAATAATGTTGCGCGGAAGCTGTATAGATCGAGATTCCGTCCGGCTCATCAACGGACCCTATTCCTCGGTTATGCGCGATTGTGCAGTGGGGGGCACGACCCGGATGTTTGGTTGTTGGCCGGGGGGGGGGTAGGAAAACTACAGTGGGTGGGCATTGTTTTAATGTTATGGATGTTAGTAACATTTTCCGAGTTGATGTATTGAAAGGTTGTGAATTCTTGCAAACGCAGCCCCCGGTGGGAATTATGGACGTATTAGGCGCTTCGCCGGCCGTCGTTCTAAAGGTAGTTTTGTATGCTGTTTCATCCATGGGACAAGGTATTGCGTATTTTGTGGAGTTTTTGATTTGTCTGATTATCTGCAAGTCAAAAACAGATCTCAGAAAGAAGTAAGTCCGGTCCCCCTTGTAACGCGACCGGCGTAGCGAAAGAGAGTGTTTTGTCCAGGGGCGGGGATTCCAACAGGGTCGTGGAATCCGGGAGGAAAATCTGTACAACATAGATCTGAAAACGCTCCCTTCCCTCCCCCATTGGGGCCGTCTTCGTACCGAATCCAGATTGAAGAAAAAAAAACGGCCCAAGTCCGGCGGAGGTCCGTGTGGGCAGATTTGGCCTTTTGCCAGTTCGCGTCGCAGCCGGGGGGGGGGGGACCCAAACATATATCGTCCGATAGGGTTTCCAGGTTTGTTTTGACCAGGTTAACTGGATTTGATCTTTCGTAATTAAGCGGAACAGCATTTTTGCCGCACCCGGGAATAGAGGTAGATCGTTTGTTTCACAGCCCGCTGCATTAGAAAAACAAAGGATTATGCCTATGGGATTAATGTGGATGGCCGTCTCTATGGGGAAAACAGTCCCCCCCCTGGGGCAGCTTAATGGGCAATGTATCAGTGATTCACCAGCTGAAGTGGTTGCGATATTATAAGGGCCAACAAGAAGCAAAAAAGTGGCAGAAAAACGCTCCGACCATTTTGGGGGGCAATTTCTTGGTGAAAAAACCATAGCAAAACTTGAAAGTCCCCCAATGTTTTACCGTCTTGAACTTGGGATAAGGCAAACTCAGTTTCAAGGATGCTGGAAGAGAGTATGAAGGTCAACAGTGTAAATGATTGAAGGCGAGAAAGTAGCCATACGGGCATCGGTAGGAGCCCAGAGATGAGGCTCAGAAACCCTCAGATGAGAGAGCACAGAAATGACCTTAGTGGTTAGGCATTAACAATGATCTGGCCTTCTTAAATTTGGTATGGGGAAAACTGCCCTTAATTCCCTGAACAAAGAACAACAGGTAAGGGAACACCAGCTGAAAAGACAAGAACAAGAACTCGATACTCACCTTTCAGGTACTCTTTCCCCTCCAAATTCTGCGTAATGAGAGACAAATCATACTTAACCTATGGGAAAATGGATCTGCCAAAAACAGGCTTAGGAAAATGACTAAATCCAAAAGATAGAAGAAGGACCACACATGGGGAGGAGTGAGTGCAGGTCGCTCTTTAAATAACGCCTATGTGTAGAGAATGGATTGGGAAGTAAGAAGAAGTATAGAAGAAAGGAGAAATTGAAAAAGAGAAAATGATTTTCCTCCTGTGTCCCTCTTCCCTTTCCCTCTTGGTCTTATTCTCCCTGCTCCTCTCTCACTCGCTCCCTCTCCCTCCTCCTTCGCTCCCTATGAGCCCTTTTAAGGTGTGGTCCCCCCTTTGAGAGGGGACAGCCTGTTTTTGCTTGACCATTTTTTTTCCTATCCTGGGTTATTTTTTTTTGGGTTCCACCTGCATAATTTTTTGTTCTATGGGATTAGTGAACACATTAATTCCCTAATAGGGTATATTCGATCCGTAGAGAGCGTTACAGCCCCAGGGGAAGAAGGGAAAGTATGGGCTTTACTTCCCTCTCTTTCATTCCTCTGTGTACTGCTACCCTAATTAAAAAAATCTGGTGCTGGAGCTGAGCTGAAGATGAAGCCCAAGATTTCTGAAAAAAAAAGTCTGTATCTAACGATGGTGTCTTTTCCTTTTGATTATTGTTCTTCTTCAATTAAATCTCCTTGATGCCTCTTGTCCTTTTTTGTGTTTTAAAATGTTTTTGTGTTTTTTTGGGAGCCTTTTTTAAGTGGTTCCAGTGCTCACTGAGTCCCATCTTGTAAATTTTCCGTCCTAAGAGTCATACGCTCGCGTAGTTTTTAAGTTTTAATGGTTTGTATGCCTGGGCGTTTCCATCAAACTCCATTTTTAGGCATCCTTTTTTCATTTTAAAAGATAGGCGCTTTTACCCATTTTTCATATCAGGGTCCCAATTGGACGGGTAGTGTCAATGACCCCGTTTCAACCTAGAGAAATCATGTATAAATACACGGTCTAAACAGTGCCTATACATAACACCCTAAAAATGTACCTAGAGGGAGAAATGGATTCCCGGTTTTTTGTCTAAGTTCTCCGCTACTCGAATAGTTTATATAAATAATTTTTCCAGTTTTCCACCCGAATCATGTCCTAGGGGAATACAGACTGCATAGGCTTTAGAAATTGCTGCTTAAAATATGAGTTTGAGGAGCGGGTATGGGTAGTTTTGCCCCAGACTGTCGTTCTTCGCTCCTCGAACTAGTTATATATTATATGTTGGGGGGGGGGGTTTGGGGATATGTTTACTAAAATCGCGTTTTGTTGTTGCCCTTTTGCTTGCATGCCTGATATAAACAACTGTTTTTTTTCATATCTCTTACTTAAATTCTTGTTTTTTTTTAAACTCTCTTTCCCCGGGGATTACGATCCTCTTTATGCTCGTCCCGTTTTTTTCAAACTTTCTTCCTTAAATCAGAGCAGAAAAAAAGAACTTGAGCATATGTTTTGGCCTGATACACCGGACGCCGACTACCGCAAGAACGAATTTTTGGAAGCTTATTCCATCTTTTGTTTGGCTGAGGAGTTGGCATGCCCGGAAAAAAAAAATACTGTTGTTTAGTGTTTGCCCCTAGGTAAAAACTGGTCCACCCCACAATTTTTTATTTATATTTGGTTTTTAAATTTGTTAAGATTAATTTACCTGCCATGTTATACATAATGAGGAGGCTATTAAACTACTACAGTCTGTCGAGTTTGGAAAGTTGGTTTTGTGTAAATATACTGCGGTAGGTGGGGTAAGGGTTTTTTTAAATCTCTTTCGTGAGTCTTCGAGTAAGGAATGCTATGATTAGATTTTGCAATAATGGATGGATTAGGTGAAAGTAGTTCGAGTATACTTGTTGATTTTTAAATATATGGGATTAGATATAAGTAAAACTTATTTCATTTGAAAATATTAAAAGGGTTATTATGTTGCATTTTCTTTATTGATTTTTTTAAAAAAAATCGTTAGATTTTAAAGATTAGATAAAAATGTTGAGAATTTTACGCTCAAACTATAAAAAGTTACTTTTTGTGGTCGTGACGGTTTTTATTTTTTTATTTTTCTATTTATATATTTTTGGCTTTTTAATAATATACGGAAGGAGAAAGCTGAAATAATTCACTTATAATCACGCTTTAAAAATTACAAATATACCTACCTAGCCACAAAAAGGAAAAATAAAAAAAAAAGAAAAAAACCAACGATCTAATAAATAAATATAATAAGATAAACAAACAAAGAATATGCATGCAAATTAATTACTACTGCTGAAATAATGAATAATAATAATAATATAGGATGATGAAAATAATTGATATTGGATATAATATATAATGGTATAGGGAGGTTGTTACAATATCTAATTCTTCACTCTGACTTCTACCATCTAATTCCATCATTCCCCCATCAAAGGTCACTTGCAATCAGATTAAAATATATATTTTTATATTTTTTTTAATAGAAAATTATTTCATGATAGCAATGATTATGAACTTATAGGTATACAAGCCAAATAGTCAAAGAACATTAATAAAACAAAAAATAATTTTTTATTAAAAGAAATTTCGTCGATAATTTTTTTTAATTAATTTTTGGTGAGCTATTTGAGAATTTTATTTTATTATTTAATTATTTTTTTCATATTGGGCCTATCAAGCCAATACGGCCCTGTCTTAATATGAAAGCCCATCGTCCATTAGAAACCCTTATGAAACGTTGGGTTCGGGGTAGCCGTACGAAGTTTTGTAATATAAGCTTACGAACTTGCTTCGGACAGCCGTTGTGCTCCCGGGGTAACGTAACATTTTACAATTTTAGCCCTCAACTTATATCAATTTCGCGCGCTTAATCCTGCTCGGAATTCATTTCTCTTTTCAGTACTAACTCTGTCCTTTCCCAAGATCCGTCGTTCGAGTCGAGCATGAAAGATTTTAGGAGATTCAACCATAAGAGTCTCCAACATGGAGTGTAGCATTTCGCTCGATTTTTGAAGAACTGAGTCCCCCCCCTGTTGGAGGCGCCCGTACTTTTTGTTTTTTTTTTTTGATTTCTCCCATTAGGACTAAACTTCTTGATCTGTTCCCTCTATTGCTTTCGAATTCTGCAGATTCCTTACTGTTGAGTTTTCCTGAAAATCATTCGATTTTGATGTATTTGAGGTTGCTTTAATTGGAAATCCTAATTGCATTTCGTGGTTTATATGGTTTAACAAGGATTCTAGGTTTTGAATGCACACCATTTACTACCCGTTGTATTTTACGATTTTTAGGGTTTTTTAATGCTGCATGCGTTTTTGTAGTATTTTTTGAGAATAATTGAATTTGGTATGAACTAACCTCGTGCTGTTCTTAGTAAATTGAAGTTTATGCGCTAGTCTTTATATCACTAGTTTAGAATGCATTGAAAGAGTTTGTTGATATTTAGCTAGTGATTTTCAAGTTTGTATTAGTGACTGGAAATTTGGTTTTTGGCTCAAAAACATGGAAATAGCTGGAGTGAAAACGATGAAAGAGCTCCAAAGTAGGAGGGCGCCGGGCTAGAGGAAAATCGGCTTTATCCGGGGGGGGGATATAAGCAACTTGAAGGAGCAACCTGTACTGCAGAAGGGGAGATACGAAGCAGCAGTCTAGTTTGCTTAAGACCTATGAATATGTTGATAAGTTACAGAAGGTACTTCTGATGTGTTCTATAAGCTGCCCAGTTTGATTGGCTCATCTTATTGATGATGCTTTTATTTTTCTTATCCCCAGGAAAATATGGCACTTACGAAGGTTCTTGCAGAAAGAAAGTATCCTTTGTGACAGTCATAATCCATAACAGAAATAGTCTTTGTTTTTCTGTTCGGGCTTTATACTAGCCCGCAATTTATATCATACAGTACGTACGTAAGTATGCAGTATCATATATAAATCGCATGAACTTTCTTTTTCCTTGATGAGTATTTTCGAATAGTCGTATAATTGAGATAAGTGGAAAGGAGTCCTAGAGACATTAAGAGCCAATTTTCAGAAATTGCGCAGAGCAGCAGATATCATGCAATTCGCTTGTTAACCAAGGAGCAAACAGTCAAATGTTAGCGGTAATCTTGCACCTGCATCTTTGTGTCTTTAGTTTCCATTTTATCACTTGTTCATTGCAAGCTAGTATCCTAGAAAATAAATTTTAATGATCTTCTACACTTGACGACGTGGTTCTTTCTATTTTTAGGAACTTAATTCAGGTAAAGAAAGGGTGAGTTGATATTTCTATCATCTGAAATTTGATTTAGTTTGCAGATGGAACCCTTTAATTTGCTGCAACTGAATGTAATTTTATGTTCTGCAGCTGAAAGCCCTTCAACACGAGCTTGGATGTAAAAATGGCATTCTTATGTCGAGAAAACTGGATTTGGGAGGTTACTTTAATTTTTATTAGTCATTTCAAATTTGCAATTAAGTGCTTATTGATTATTGACACCGAAACTCTTCTTCCAGAGAAAAGAAAAAAGCAGCGACATTTCAGCCTGGAGGGGTACATAAACAATACTGTTGTTATTCTTTAGTAAATATTTCTTATGCTTCTTACCCTTTTCTTTTCTCTACCTCAAGGTAGGGACAGGACGCCGAGTGTAGTGAGGCAGCGGAATCTATGAATACAAATGAGGGTAATAGGCCTTGCAAAACTAACAGGCGACGACAATCCAGAAAAGAATGTAAGTGCCAGTGCACAAATTACCTTCAGCTTCAGGATATGAATATTGTCATTATCTAAAAAACCAATTCTCTTCTGAATGCAGCTTTTGGCAGGCTTCAGTTCTTCAGACGGAGGTTCACAAGGTTGAAAGCAAAAGGTCTGTTCATGGATAGTGTAATTGCTATATTTGGACTTATATGATTATATTGCATACCAAAGATAAATCGAATATGATCTTGATTGAATTTCTAACAAGGCGGCTAGAAGGCAATCTGCAAGATTCAAAACAGCGAGGAACCAGCGGCTGCAAACCACATCTTGGAGACAGACAATTCCAATTCTAATGATGCTTTGCAATGTAAAGAGACTTCAGTTCATCGAGCAGAGGTAGGGGGGGGGGTGCAAAAGGTCGAAGGCAAGAGGTCAGTTCATGGACATTCAATTGCTTTATTGGGTTTATGTTTTCAGGACGTGTTCAAAATGATGTAGCATAAATACATATTGTTGAACATGAGCTTCATTTGAATTTTCAATAGGCCTTGTTCGAGAAGGCAGTCTGCAAGATTGAAAATTGAGGAACCGGTTGCTACAAATGACTTATTCGGGATAGAAAATTTCAATTCTACCGATGCTTCTCAATGTAGAGAAACTTCAGTTCTTCAAACAGAGGTCCAGAAGGGTGAAGGCATAAGGTCTGTTCGTGGATATTTAATTGCCTTATTTGGCTTCACATTTTTAGAAAATTTCCAGATAATATAGCATACAAGAGATATTGAGCATGAACTTCATTGAATTTCTTAGCAGGCCTTGTCTGAGAAGGCAGTCTGCAAGATCAAACTCGAGGAACCAGTGGCTATCAGAGACTCACTTGATACTGTAAATTCCAATTTCTACCAGTGCTTCTCAATGCAAAGAGATCGTATGTGAAGTAAAAATTGTTCCAACTTCATCAGTAGAAAACAGAAGATAATGGCAATTCTACTGATAGATCTGAAGTTCAAGAACGTCGGAGGACATCCGTTGGTAGGCCGTTAAGGCGAGCCGCTGAAAAAATTCAGTCCTACAAGGAAATTCCACTTAATCGTCAAGATGCGCAGACCGGTATGATCAATCCTAACCCAAATTTCCTTTTCCTGTTGTCAAGTGAGGGAAGGAGTTGTGATCACTAGTTCTGTATCTGTATCCTTTGATAGCATTAGTTTGTGCACTTACTGTAGAAAGCTCGAGTTTGCTGTCCGACATTAAGACTAGACGATGA

mRNA sequence

ATGCGTCCCCCCCGTTGCCCTCAGGCAGGCGCATCACCTTCCGTTCGTGGGTGGCGAGAAGTTAGGTTTTGGTTTTTTTGGAGAATGCGTGGATTTCCGGATAAGAATCCCTCATTATATGCCGGCGTCCCCCCGATTAAGTGCCGTATCGTAGTCAGTGGGGGGCACGACCCGGATGTTTGGTTGTTGGCCGGGGGGGGGGTAGGAAAACTACAGTGGCCCCCGGTGGGAATTATGGACGTATTAGGCGCTTCGCCGGCCGTCGTTCTAAAGGTAGTTTTGTATGCTGTTTCATCCATGGGACAAGGGGCGGGGATTCCAACAGGGTCGTGGAATCCGGGAGGAAAATCTGTACAACATAGATCTGAAAACGCTCCCTTCCCTCCCCCATTGGGGCCGTCTTCGTACCGAATCCAGATTGAAGAAAAAAAAACGGCCCAAGTCCGGCGGAGGTCCGTGTGGGCAGATTTGGCCTTTTGCCAGTTCGCGTCGCAGCCGGGGGGGGGGGGACCCAAACATATATCGTCCGATAGGGTTTCCAGAAGGGGAGATACGAAGCAGCAGTCTAGTTTGCTTAAGACCTATGAATATGTTGATAAGTTACAGAAGGGACAGGACGCCGAGTGTAGTGAGGCAGCGGAATCTATGAATACAAATGAGGGTAATAGGCCTTGCAAAACTAACAGGCGACGACAATCCAGAAAAGAATCTTTTGGCAGGCTTCAGTTCTTCAGACGGAGGTTCACAAGGTTGAAAGCAAAAGGTCTGTTCATGGATAGTAAGGCAATCTGCAAGATTCAAAACAGCGAGGAACCAGCGGCTGCAAACCACATCTTGGAGACAGACAATTCCAATTCTAATGATGCTTTGCAATGTAAAGAGACTTCAGTTCATCGAGCAGAGGTAGGGGGGGGGGTGCAAAAGGTCGAAGGCAAGAGGCCTTGTTCGAGAAGGCAGTCTGCAAGATTGAAAATTGAGGAACCGGTTGCTACAAATGACTTATTCGGGATAGAAAATTTCAATTCTACCGATGCTTCTCAATGTAGAGAAACTTCAGTTCTTCAAACAGAGGCCTTGTCTGAGAAGGCAGTCTGCAAGATCAAACTCGAGGAACCAGTGGCTATCAGAGACTCACTTGATACTAAAACAGAAGATAATGGCAATTCTACTGATAGATCTGAAGTTCAAGAACGTCGGAGGACATCCGTTGGTAGGCCGTTAAGGCGAGCCGCTGAAAAAATTCAGTCCTACAAGGAAATTCCACTTAATCGTCAAGATGCGCAGACCGCATTAGTTTGTGCACTTACTGTAGAAAGCTCGAGTTTGCTGTCCGACATTAAGACTAGACGATGA

Coding sequence (CDS)

ATGCGTCCCCCCCGTTGCCCTCAGGCAGGCGCATCACCTTCCGTTCGTGGGTGGCGAGAAGTTAGGTTTTGGTTTTTTTGGAGAATGCGTGGATTTCCGGATAAGAATCCCTCATTATATGCCGGCGTCCCCCCGATTAAGTGCCGTATCGTAGTCAGTGGGGGGCACGACCCGGATGTTTGGTTGTTGGCCGGGGGGGGGGTAGGAAAACTACAGTGGCCCCCGGTGGGAATTATGGACGTATTAGGCGCTTCGCCGGCCGTCGTTCTAAAGGTAGTTTTGTATGCTGTTTCATCCATGGGACAAGGGGCGGGGATTCCAACAGGGTCGTGGAATCCGGGAGGAAAATCTGTACAACATAGATCTGAAAACGCTCCCTTCCCTCCCCCATTGGGGCCGTCTTCGTACCGAATCCAGATTGAAGAAAAAAAAACGGCCCAAGTCCGGCGGAGGTCCGTGTGGGCAGATTTGGCCTTTTGCCAGTTCGCGTCGCAGCCGGGGGGGGGGGGACCCAAACATATATCGTCCGATAGGGTTTCCAGAAGGGGAGATACGAAGCAGCAGTCTAGTTTGCTTAAGACCTATGAATATGTTGATAAGTTACAGAAGGGACAGGACGCCGAGTGTAGTGAGGCAGCGGAATCTATGAATACAAATGAGGGTAATAGGCCTTGCAAAACTAACAGGCGACGACAATCCAGAAAAGAATCTTTTGGCAGGCTTCAGTTCTTCAGACGGAGGTTCACAAGGTTGAAAGCAAAAGGTCTGTTCATGGATAGTAAGGCAATCTGCAAGATTCAAAACAGCGAGGAACCAGCGGCTGCAAACCACATCTTGGAGACAGACAATTCCAATTCTAATGATGCTTTGCAATGTAAAGAGACTTCAGTTCATCGAGCAGAGGTAGGGGGGGGGGTGCAAAAGGTCGAAGGCAAGAGGCCTTGTTCGAGAAGGCAGTCTGCAAGATTGAAAATTGAGGAACCGGTTGCTACAAATGACTTATTCGGGATAGAAAATTTCAATTCTACCGATGCTTCTCAATGTAGAGAAACTTCAGTTCTTCAAACAGAGGCCTTGTCTGAGAAGGCAGTCTGCAAGATCAAACTCGAGGAACCAGTGGCTATCAGAGACTCACTTGATACTAAAACAGAAGATAATGGCAATTCTACTGATAGATCTGAAGTTCAAGAACGTCGGAGGACATCCGTTGGTAGGCCGTTAAGGCGAGCCGCTGAAAAAATTCAGTCCTACAAGGAAATTCCACTTAATCGTCAAGATGCGCAGACCGCATTAGTTTGTGCACTTACTGTAGAAAGCTCGAGTTTGCTGTCCGACATTAAGACTAGACGATGA

Protein sequence

MRPPRCPQAGASPSVRGWREVRFWFFWRMRGFPDKNPSLYAGVPPIKCRIVVSGGHDPDVWLLAGGGVGKLQWPPVGIMDVLGASPAVVLKVVLYAVSSMGQGAGIPTGSWNPGGKSVQHRSENAPFPPPLGPSSYRIQIEEKKTAQVRRRSVWADLAFCQFASQPGGGGPKHISSDRVSRRGDTKQQSSLLKTYEYVDKLQKGQDAECSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFFRRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGGGVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAVCKIKLEEPVAIRDSLDTKTEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNRQDAQTALVCALTVESSSLLSDIKTRR
Homology
BLAST of Csor.00g124360 vs. NCBI nr
Match: KAG6578799.1 (hypothetical protein SDJN03_23247, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 894 bits (2309), Expect = 0.0
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0

Query: 1   MRPPRCPQAGASPSVRGWREVRFWFFWRMRGFPDKNPSLYAGVPPIKCRIVVSGGHDPDV 60
           MRPPRCPQAGASPSVRGWREVRFWFFWRMRGFPDKNPSLYAGVPPIKCRIVVSGGHDPDV
Sbjct: 1   MRPPRCPQAGASPSVRGWREVRFWFFWRMRGFPDKNPSLYAGVPPIKCRIVVSGGHDPDV 60

Query: 61  WLLAGGGVGKLQWPPVGIMDVLGASPAVVLKVVLYAVSSMGQGAGIPTGSWNPGGKSVQH 120
           WLLAGGGVGKLQWPPVGIMDVLGASPAVVLKVVLYAVSSMGQGAGIPTGSWNPGGKSVQH
Sbjct: 61  WLLAGGGVGKLQWPPVGIMDVLGASPAVVLKVVLYAVSSMGQGAGIPTGSWNPGGKSVQH 120

Query: 121 RSENAPFPPPLGPSSYRIQIEEKKTAQVRRRSVWADLAFCQFASQPGGGGPKHISSDRVS 180
           RSENAPFPPPLGPSSYRIQIEEKKTAQVRRRSVWADLAFCQFASQPGGGGPKHISSDRVS
Sbjct: 121 RSENAPFPPPLGPSSYRIQIEEKKTAQVRRRSVWADLAFCQFASQPGGGGPKHISSDRVS 180

Query: 181 RRGDTKQQSSLLKTYEYVDKLQKGQDAECSEAAESMNTNEGNRPCKTNRRRQSRKESFGR 240
           RRGDTKQQSSLLKTYEYVDKLQKGQDAECSEAAESMNTNEGNRPCKTNRRRQSRKESFGR
Sbjct: 181 RRGDTKQQSSLLKTYEYVDKLQKGQDAECSEAAESMNTNEGNRPCKTNRRRQSRKESFGR 240

Query: 241 LQFFRRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRA 300
           LQFFRRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRA
Sbjct: 241 LQFFRRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRA 300

Query: 301 EVGGGVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALS 360
           EVGGGVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALS
Sbjct: 301 EVGGGVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALS 360

Query: 361 EKAVCKIKLEEPVAIRDSLDTKTEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEI 420
           EKAVCKIKLEEPVAIRDSLDTKTEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEI
Sbjct: 361 EKAVCKIKLEEPVAIRDSLDTKTEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEI 420

Query: 421 PLNRQDAQTALVCALTVESSSLLSDIKTRR 450
           PLNRQDAQTALVCALTVESSSLLSDIKTRR
Sbjct: 421 PLNRQDAQTALVCALTVESSSLLSDIKTRR 450

BLAST of Csor.00g124360 vs. NCBI nr
Match: XP_023550313.1 (SHUGOSHIN 2-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282 bits (721), Expect = 6.08e-87
Identity = 195/393 (49.62%), Postives = 214/393 (54.45%), Query Frame = 0

Query: 163 ASQPGGGGPKHISS------DRVSRRGDTKQQSSLLKTYEYVDKLQK------------- 222
           +S+ GG   K +S         V ++GDTKQQSSLLKTYEYVDKLQK             
Sbjct: 30  SSKVGGAQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKENMALTKVLAERN 89

Query: 223 ------GQDAE------------------------------------------------- 282
                 G + E                                                 
Sbjct: 90  RIIEISGNELETLRTNFQKLQQQNLQFAQANSQMLAELNSGKERLKALQHELGCKNGILR 149

Query: 283 ------------------------CSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFF 342
                                   CSEAAESMNTNEGN PCKTNRRRQSR+ESFG     
Sbjct: 150 SRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCKTNRRRQSRQESFG-TSVL 209

Query: 343 RRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGG 402
           +    ++++K     S        +EEP AANHILETDNSNSNDALQCKETSVHRAEV  
Sbjct: 210 KTEVQKVESKRPRRQSARF----KTEEPVAANHILETDNSNSNDALQCKETSVHRAEV-- 269

Query: 403 GVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV 423
             QKVEGKRPCSR+QSARLKIEEPVATNDL GIENFNSTDASQCRETSVLQTE    + +
Sbjct: 270 --QKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGI 329

BLAST of Csor.00g124360 vs. NCBI nr
Match: XP_023550312.1 (SHUGOSHIN 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282 bits (721), Expect = 7.05e-87
Identity = 195/393 (49.62%), Postives = 214/393 (54.45%), Query Frame = 0

Query: 163 ASQPGGGGPKHISS------DRVSRRGDTKQQSSLLKTYEYVDKLQK------------- 222
           +S+ GG   K +S         V ++GDTKQQSSLLKTYEYVDKLQK             
Sbjct: 30  SSKVGGAQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKENMALTKVLAERN 89

Query: 223 ------GQDAE------------------------------------------------- 282
                 G + E                                                 
Sbjct: 90  RIIEISGNELETLRTNFQKLQQQNLQFAQANSQMLAELNSGKERLKALQHELGCKNGILR 149

Query: 283 ------------------------CSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFF 342
                                   CSEAAESMNTNEGN PCKTNRRRQSR+ESFG     
Sbjct: 150 SRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCKTNRRRQSRQESFG-TSVL 209

Query: 343 RRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGG 402
           +    ++++K     S        +EEP AANHILETDNSNSNDALQCKETSVHRAEV  
Sbjct: 210 KTEVQKVESKRPRRQSARF----KTEEPVAANHILETDNSNSNDALQCKETSVHRAEV-- 269

Query: 403 GVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV 423
             QKVEGKRPCSR+QSARLKIEEPVATNDL GIENFNSTDASQCRETSVLQTE    + +
Sbjct: 270 --QKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGI 329

BLAST of Csor.00g124360 vs. NCBI nr
Match: XP_023550314.1 (SHUGOSHIN 2-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (720), Expect = 8.59e-87
Identity = 195/394 (49.49%), Postives = 214/394 (54.31%), Query Frame = 0

Query: 163 ASQPGGGGPKHISS------DRVSRRGDTKQQSSLLKTYEYVDKLQK------------- 222
           +S+ GG   K +S         V ++GDTKQQSSLLKTYEYVDKLQK             
Sbjct: 30  SSKVGGAQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKENMALTKVLAERN 89

Query: 223 ------GQDAE------------------------------------------------- 282
                 G + E                                                 
Sbjct: 90  RIIEISGNELETLRTNFQKLQQQNLQFAQANSQMLAELNSGKERLKALQHELGCKNGILR 149

Query: 283 ------------------------CSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFF 342
                                   CSEAAESMNTNEGN PCKTNRRRQSR+ESFG     
Sbjct: 150 SRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCKTNRRRQSRQESFG-TSVL 209

Query: 343 RRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGG 402
           +    ++++K     S        +EEP AANHILETDNSNSNDALQCKETSVHRAEV  
Sbjct: 210 KTEVQKVESKRPRRQSARF----KTEEPVAANHILETDNSNSNDALQCKETSVHRAEV-- 269

Query: 403 GVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV 423
             QKVEGKRPCSR+QSARLKIEEPVATNDL GIENFNSTDASQCRETSVLQTE    + +
Sbjct: 270 --QKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGI 329

BLAST of Csor.00g124360 vs. NCBI nr
Match: XP_023550311.1 (SHUGOSHIN 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (720), Expect = 1.02e-86
Identity = 195/394 (49.49%), Postives = 214/394 (54.31%), Query Frame = 0

Query: 163 ASQPGGGGPKHISS------DRVSRRGDTKQQSSLLKTYEYVDKLQK------------- 222
           +S+ GG   K +S         V ++GDTKQQSSLLKTYEYVDKLQK             
Sbjct: 30  SSKVGGAQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKENMALTKVLAERN 89

Query: 223 ------GQDAE------------------------------------------------- 282
                 G + E                                                 
Sbjct: 90  RIIEISGNELETLRTNFQKLQQQNLQFAQANSQMLAELNSGKERLKALQHELGCKNGILR 149

Query: 283 ------------------------CSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFF 342
                                   CSEAAESMNTNEGN PCKTNRRRQSR+ESFG     
Sbjct: 150 SRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCKTNRRRQSRQESFG-TSVL 209

Query: 343 RRRFTRLKAKGLFMDSKAICKIQNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGG 402
           +    ++++K     S        +EEP AANHILETDNSNSNDALQCKETSVHRAEV  
Sbjct: 210 KTEVQKVESKRPRRQSARF----KTEEPVAANHILETDNSNSNDALQCKETSVHRAEV-- 269

Query: 403 GVQKVEGKRPCSRRQSARLKIEEPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV 423
             QKVEGKRPCSR+QSARLKIEEPVATNDL GIENFNSTDASQCRETSVLQTE    + +
Sbjct: 270 --QKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGI 329

BLAST of Csor.00g124360 vs. ExPASy TrEMBL
Match: A0A6J1FG21 (SHUGOSHIN 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 SV=1)

HSP 1 Score: 279 bits (713), Expect = 4.63e-86
Identity = 168/251 (66.93%), Postives = 179/251 (71.31%), Query Frame = 0

Query: 207 AECSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFFRRRFTRLKAKGLFMDSKAICKI 266
           AECSEA ESMNTNEGNRPCKTNRRRQSRKESFG     +    ++++K     S      
Sbjct: 172 AECSEAVESMNTNEGNRPCKTNRRRQSRKESFG-TSVLQTEVHKVESKRPRRQSARF--- 231

Query: 267 QNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGGGVQKVEGKRPCSRRQSARLKIE 326
             +EEP AANHILETDNSNSNDALQCKETSV RAEV    QKVEGKRPCSRRQSARLK E
Sbjct: 232 -KTEEPVAANHILETDNSNSNDALQCKETSVRRAEV----QKVEGKRPCSRRQSARLKNE 291

Query: 327 EPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV--------CKIKLEEPVAIRDS 386
           EPVATNDL GIENFNSTDASQCRETSVLQTE    + +         + KLEEPVAI+DS
Sbjct: 292 EPVATNDLLGIENFNSTDASQCRETSVLQTEVQKGEGIRPCLRRQSARFKLEEPVAIKDS 351

Query: 387 LDT--------------------------KTEDNGNSTDRSEVQERRRTSVGRPLRRAAE 423
           LDT                          +TEDNGNSTDRSEVQERRRTSVGRPLRRAAE
Sbjct: 352 LDTVNSNSTSASLCNEIVCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAE 411

BLAST of Csor.00g124360 vs. ExPASy TrEMBL
Match: A0A6J1FMU6 (SHUGOSHIN 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 SV=1)

HSP 1 Score: 278 bits (712), Expect = 6.73e-86
Identity = 168/252 (66.67%), Postives = 179/252 (71.03%), Query Frame = 0

Query: 207 AECSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFFRRRFTRLKAKGLFMDSKAICKI 266
           AECSEA ESMNTNEGNRPCKTNRRRQSRKESFG     +    ++++K     S      
Sbjct: 172 AECSEAVESMNTNEGNRPCKTNRRRQSRKESFG-TSVLQTEVHKVESKRPRRQSARF--- 231

Query: 267 QNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGGGVQKVEGKRPCSRRQSARLKIE 326
             +EEP AANHILETDNSNSNDALQCKETSV RAEV    QKVEGKRPCSRRQSARLK E
Sbjct: 232 -KTEEPVAANHILETDNSNSNDALQCKETSVRRAEV----QKVEGKRPCSRRQSARLKNE 291

Query: 327 EPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV---------CKIKLEEPVAIRD 386
           EPVATNDL GIENFNSTDASQCRETSVLQTE    + +          + KLEEPVAI+D
Sbjct: 292 EPVATNDLLGIENFNSTDASQCRETSVLQTEVQKGEGISRPCLRRQSARFKLEEPVAIKD 351

Query: 387 SLDT--------------------------KTEDNGNSTDRSEVQERRRTSVGRPLRRAA 423
           SLDT                          +TEDNGNSTDRSEVQERRRTSVGRPLRRAA
Sbjct: 352 SLDTVNSNSTSASLCNEIVCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAA 411

BLAST of Csor.00g124360 vs. ExPASy TrEMBL
Match: A0A6J1FHB1 (SHUGOSHIN 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 SV=1)

HSP 1 Score: 278 bits (712), Expect = 6.73e-86
Identity = 168/252 (66.67%), Postives = 179/252 (71.03%), Query Frame = 0

Query: 207 AECSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFFRRRFTRLKAKGLFMDSKAICKI 266
           AECSEA ESMNTNEGNRPCKTNRRRQSRKESFG     +    ++++K     S      
Sbjct: 172 AECSEAVESMNTNEGNRPCKTNRRRQSRKESFG-TSVLQTEVHKVESKRPRRQSARF--- 231

Query: 267 QNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGGGVQKVEGKRPCSRRQSARLKIE 326
             +EEP AANHILETDNSNSNDALQCKETSV RAEV    QKVEGKRPCSRRQSARLK E
Sbjct: 232 -KTEEPVAANHILETDNSNSNDALQCKETSVRRAEV----QKVEGKRPCSRRQSARLKNE 291

Query: 327 EPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV---------CKIKLEEPVAIRD 386
           EPVATNDL GIENFNSTDASQCRETSVLQTE    + +          + KLEEPVAI+D
Sbjct: 292 EPVATNDLLGIENFNSTDASQCRETSVLQTEVQKGEGISRPCLRRQSARFKLEEPVAIKD 351

Query: 387 SLDT--------------------------KTEDNGNSTDRSEVQERRRTSVGRPLRRAA 423
           SLDT                          +TEDNGNSTDRSEVQERRRTSVGRPLRRAA
Sbjct: 352 SLDTVNSNSTSASLCNEIVCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAA 411

BLAST of Csor.00g124360 vs. ExPASy TrEMBL
Match: A0A6J1JYY1 (SHUGOSHIN 2-like isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=1)

HSP 1 Score: 256 bits (655), Expect = 2.10e-77
Identity = 158/251 (62.95%), Postives = 174/251 (69.32%), Query Frame = 0

Query: 207 AECSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFFRRRFTRLKAKGLFMDSKAICKI 266
           A+ SEAAESMNT + NRPCKTNRRRQSR+ESFG     +    +++ K     S      
Sbjct: 172 AKSSEAAESMNTKQDNRPCKTNRRRQSRQESFG-TSVLQTEVQKVEGKRPRRQSARF--- 231

Query: 267 QNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGGGVQKVEGKRPCSRRQSARLKIE 326
             +EEP AAN ILETDNSNSN++ QCKETSV RAEV    QKVEGKRPCSRRQSARLKIE
Sbjct: 232 -KTEEPVAANDILETDNSNSNNSSQCKETSVRRAEV----QKVEGKRPCSRRQSARLKIE 291

Query: 327 EPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV--------CKIKLEEPVAIRDS 386
           EPVATNDL GIENFNSTDASQCRETSVLQTE    + +         + KLEEPVAI+DS
Sbjct: 292 EPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDS 351

Query: 387 LDT--------------------------KTEDNGNSTDRSEVQERRRTSVGRPLRRAAE 423
           LDT                          +T+DNGNSTDRSEVQE RRTSVGRPLRRAAE
Sbjct: 352 LDTVNSNSTSASLCKEIVCEIKIVPTSSVETKDNGNSTDRSEVQECRRTSVGRPLRRAAE 411

BLAST of Csor.00g124360 vs. ExPASy TrEMBL
Match: A0A6J1JRF5 (SHUGOSHIN 2-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=1)

HSP 1 Score: 256 bits (654), Expect = 3.04e-77
Identity = 158/252 (62.70%), Postives = 174/252 (69.05%), Query Frame = 0

Query: 207 AECSEAAESMNTNEGNRPCKTNRRRQSRKESFGRLQFFRRRFTRLKAKGLFMDSKAICKI 266
           A+ SEAAESMNT + NRPCKTNRRRQSR+ESFG     +    +++ K     S      
Sbjct: 172 AKSSEAAESMNTKQDNRPCKTNRRRQSRQESFG-TSVLQTEVQKVEGKRPRRQSARF--- 231

Query: 267 QNSEEPAAANHILETDNSNSNDALQCKETSVHRAEVGGGVQKVEGKRPCSRRQSARLKIE 326
             +EEP AAN ILETDNSNSN++ QCKETSV RAEV    QKVEGKRPCSRRQSARLKIE
Sbjct: 232 -KTEEPVAANDILETDNSNSNNSSQCKETSVRRAEV----QKVEGKRPCSRRQSARLKIE 291

Query: 327 EPVATNDLFGIENFNSTDASQCRETSVLQTEALSEKAV---------CKIKLEEPVAIRD 386
           EPVATNDL GIENFNSTDASQCRETSVLQTE    + +          + KLEEPVAI+D
Sbjct: 292 EPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGISRPCLRRQSARFKLEEPVAIKD 351

Query: 387 SLDT--------------------------KTEDNGNSTDRSEVQERRRTSVGRPLRRAA 423
           SLDT                          +T+DNGNSTDRSEVQE RRTSVGRPLRRAA
Sbjct: 352 SLDTVNSNSTSASLCKEIVCEIKIVPTSSVETKDNGNSTDRSEVQECRRTSVGRPLRRAA 411

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6578799.10.0100.00hypothetical protein SDJN03_23247, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023550313.16.08e-8749.62SHUGOSHIN 2-like isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_023550312.17.05e-8749.62SHUGOSHIN 2-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023550314.18.59e-8749.49SHUGOSHIN 2-like isoform X4 [Cucurbita pepo subsp. pepo][more]
XP_023550311.11.02e-8649.49SHUGOSHIN 2-like isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1FG214.63e-8666.93SHUGOSHIN 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 S... [more]
A0A6J1FMU66.73e-8666.67SHUGOSHIN 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 S... [more]
A0A6J1FHB16.73e-8666.67SHUGOSHIN 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 S... [more]
A0A6J1JYY12.10e-7762.95SHUGOSHIN 2-like isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=... [more]
A0A6J1JRF53.04e-7762.70SHUGOSHIN 2-like isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011515Shugoshin, C-terminalPFAMPF07557Shugoshin_Ccoord: 404..423
e-value: 9.3E-6
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..236
IPR044693Shugoshin, plantPANTHERPTHR34373SHUGOSHIN 2coord: 196..423

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g124360.m01Csor.00g124360.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034090 maintenance of meiotic sister chromatid cohesion
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0045144 meiotic sister chromatid segregation
cellular_component GO:0000775 chromosome, centromeric region
cellular_component GO:0005634 nucleus