
Csor.00g124200 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTGTTCCAAGTCTCAAGAGGCCGGAGGCAATGATGAAATTAGGATAACGATGCCGCCTATTGAAAGGAATACAAGAACGTCAAAGATTGGCTTCATTCAAACGTTGAAGACGCAAATTCAAGAAGACCCACAAATTGTTCCAAATGTTCTAATCTTTTGCTTCAATGATACTGAGAATCCATTGAACATGGCGGATTTTGAAGCTCCAAATGTCATGAAAAGAACTAAAAAATGGAGCATTCAACGAACTAGAAACATGAAAAGAAGAAAAAGAGTATCCAACCAGAAGAGGGGATGGTGGGAGATTTGGAAGAATAGTCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACGTTGATGTTGGTAGCGACGGTGATAGCAACCGTGACATTTCAAGGTGCGATCGACCCTCCTGGCGGGATTTGGCAACAAGATGTGTGGACTAATTGCAGCTGGAAACAAGGAACAGAGGTGCATGCCCAAGTTGGGACTGCAATAATGGCATGCAAATCTCTCTATGTCTACATACGTTATTTTATGGCGAATTCGATATCGTTCCTTGCATCGGTGAGTGTTATTCTATTAATAGTGAGTGGGTTTCCTTTGAAAAACAGGGTTTTTGGTGGGTTGTTGACATTAGCCATGTGTGTTGCTGTTGCATGCTTAGCGTTTGCATACGTTTGTGGATCGGCTATGGTTAATGGGAATCAAACATCCCAAAGTTACTTATGGGTTTTGCTTCGCGTTTGGTATGGAATTGTTGGGCTTGTTACTCTTTGTTGCGTTATAA ATGGAGTGTTCCAAGTCTCAAGAGGCCGGAGGCAATGATGAAATTAGGATAACGATGCCGCCTATTGAAAGGAATACAAGAACGTCAAAGATTGGCTTCATTCAAACGTTGAAGACGCAAATTCAAGAAGACCCACAAATTGTTCCAAATGTTCTAATCTTTTGCTTCAATGATACTGAGAATCCATTGAACATGGCGGATTTTGAAGCTCCAAATGTCATGAAAAGAACTAAAAAATGGAGCATTCAACGAACTAGAAACATGAAAAGAAGAAAAAGAGTATCCAACCAGAAGAGGGGATGGTGGGAGATTTGGAAGAATAGTCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACGTTGATGTTGGTAGCGACGGTGATAGCAACCGTGACATTTCAAGGTGCGATCGACCCTCCTGGCGGGATTTGGCAACAAGATGTGTGGACTAATTGCAGCTGGAAACAAGGAACAGAGGTGCATGCCCAAGTTGGGACTGCAATAATGGCATGCAAATCTCTCTATGTCTACATACGTTATTTTATGGCGAATTCGATATCGTTCCTTGCATCGCGTTTGCATACGTTTGTGGATCGGCTATGGTTAATGGGAATCAAACATCCCAAAGTTACTTATGGGTTTTGCTTCGCGTTTGGTATGGAATTGTTGGGCTTGTTACTCTTTGTTGCGTTATAA ATGGAGTGTTCCAAGTCTCAAGAGGCCGGAGGCAATGATGAAATTAGGATAACGATGCCGCCTATTGAAAGGAATACAAGAACGTCAAAGATTGGCTTCATTCAAACGTTGAAGACGCAAATTCAAGAAGACCCACAAATTGTTCCAAATGTTCTAATCTTTTGCTTCAATGATACTGAGAATCCATTGAACATGGCGGATTTTGAAGCTCCAAATGTCATGAAAAGAACTAAAAAATGGAGCATTCAACGAACTAGAAACATGAAAAGAAGAAAAAGAGTATCCAACCAGAAGAGGGGATGGTGGGAGATTTGGAAGAATAGTCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACGTTGATGTTGGTAGCGACGGTGATAGCAACCGTGACATTTCAAGGTGCGATCGACCCTCCTGGCGGGATTTGGCAACAAGATGTGTGGACTAATTGCAGCTGGAAACAAGGAACAGAGGTGCATGCCCAAGTTGGGACTGCAATAATGGCATGCAAATCTCTCTATGTCTACATACGTTATTTTATGGCGAATTCGATATCGTTCCTTGCATCGCGTTTGCATACGTTTGTGGATCGGCTATGGTTAATGGGAATCAAACATCCCAAAGTTACTTATGGGTTTTGCTTCGCGTTTGGTATGGAATTGTTGGGCTTGTTACTCTTTGTTGCGTTATAA MECSKSQEAGGNDEIRITMPPIERNTRTSKIGFIQTLKTQIQEDPQIVPNVLIFCFNDTENPLNMADFEAPNVMKRTKKWSIQRTRNMKRRKRVSNQKRGWWEIWKNSLKYKGDWLQEVQGTLMLVATVIATVTFQGAIDPPGGIWQQDVWTNCSWKQGTEVHAQVGTAIMACKSLYVYIRYFMANSISFLASRLHTFVDRLWLMGIKHPKVTYGFCFAFGMELLGLLLFVAL Homology
BLAST of Csor.00g124200 vs. NCBI nr
Match: KAG6581821.1 (hypothetical protein SDJN03_21823, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 477 bits (1227), Expect = 7.40e-170 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Csor.00g124200 vs. NCBI nr
Match: XP_022956269.1 (uncharacterized protein LOC111458021 [Cucurbita moschata]) HSP 1 Score: 357 bits (917), Expect = 8.28e-122 Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of Csor.00g124200 vs. NCBI nr
Match: XP_023526884.1 (uncharacterized protein LOC111790252 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 353 bits (906), Expect = 3.90e-120 Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of Csor.00g124200 vs. NCBI nr
Match: KAG6581822.1 (hypothetical protein SDJN03_21824, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 337 bits (865), Expect = 1.37e-112 Identity = 167/196 (85.20%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of Csor.00g124200 vs. NCBI nr
Match: KAG6581824.1 (hypothetical protein SDJN03_21826, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335 bits (858), Expect = 1.70e-112 Identity = 167/196 (85.20%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Csor.00g124200 vs. ExPASy TrEMBL
Match: A0A6J1GYJ8 (uncharacterized protein LOC111458021 OS=Cucurbita moschata OX=3662 GN=LOC111458021 PE=4 SV=1) HSP 1 Score: 357 bits (917), Expect = 4.01e-122 Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of Csor.00g124200 vs. ExPASy TrEMBL
Match: A0A0A0LGA6 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G846570 PE=4 SV=1) HSP 1 Score: 163 bits (412), Expect = 2.66e-46 Identity = 90/137 (65.69%), Postives = 107/137 (78.10%), Query Frame = 0
BLAST of Csor.00g124200 vs. ExPASy TrEMBL
Match: A0A1S4E4H6 (ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC103502000 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 6.85e-38 Identity = 81/130 (62.31%), Postives = 98/130 (75.38%), Query Frame = 0
BLAST of Csor.00g124200 vs. ExPASy TrEMBL
Match: A0A5A7UTG8 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00400 PE=4 SV=1) HSP 1 Score: 131 bits (329), Expect = 2.71e-32 Identity = 72/116 (62.07%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Csor.00g124200 vs. ExPASy TrEMBL
Match: A0A6J1IU53 (ankyrin repeat-containing protein NPR4-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111479945 PE=4 SV=1) HSP 1 Score: 108 bits (271), Expect = 4.47e-24 Identity = 67/169 (39.64%), Postives = 99/169 (58.58%), Query Frame = 0
BLAST of Csor.00g124200 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.6 bits (161), Expect = 3.0e-11 Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Csor.00g124200 vs. TAIR 10
Match: AT4G13266.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-09 Identity = 33/93 (35.48%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of Csor.00g124200 vs. TAIR 10
Match: AT4G10720.1 (Ankyrin repeat family protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04 Identity = 30/120 (25.00%), Postives = 57/120 (47.50%), Query Frame = 0
BLAST of Csor.00g124200 vs. TAIR 10
Match: AT2G24600.3 (Ankyrin repeat family protein ) HSP 1 Score: 42.7 bits (99), Expect = 4.6e-04 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 0
BLAST of Csor.00g124200 vs. TAIR 10
Match: AT2G24600.1 (Ankyrin repeat family protein ) HSP 1 Score: 42.7 bits (99), Expect = 4.6e-04 Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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