Csor.00g124050 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g124050
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 11768871 .. 11769259 (+)
RNA-Seq ExpressionCsor.00g124050
SyntenyCsor.00g124050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGCGAGAATATGGTCAAGGAAATCCGAACGGTCGGCAACATCAAGCACCCAAACTTGATCACTTCGGAAGATTTTTGGCTGGGAAAAGCCATGCTCTATTGCTTTACAGATACCATTCTAACGGGAGCCTTTTGTGGGTACAATTGGCTACATTGCGACAGGTATCATTCTACACATATATTATGTATTACCTCTGCATGTTAATGTGTTTTTGTTTGGAAGGATTGGACCGTGTTGTGATATGTTATGTGCTTATGACAGAATTCGTTTTCGGCAGCCAAGAGAAAAAGCTTCAGATGTTTACAGTTACGGGGTGGTTTTACTCGAGCCAATAACGAGAAGGAAGCCGAGATTTGCATATGCCAAATTTGAAACGAAGTAA

mRNA sequence

ATGGGGAAGCGAGAATATGGTCAAGGAAATCCGAACGGTCGGCAACATCAAGCACCCAAACTTGATCACTTCGGAAGATTTTTGGCTGGGAAAAGCCATGCTCTATTGCTTTACAGATACCATTCTAACGGGAGCCTTTTGTGGGTACAATTGGCTACATTGCGACAGCCAAGAGAAAAAGCTTCAGATGTTTACAGTTACGGGGTGGTTTTACTCGAGCCAATAACGAGAAGGAAGCCGAGATTTGCATATGCCAAATTTGAAACGAAGTAA

Coding sequence (CDS)

ATGGGGAAGCGAGAATATGGTCAAGGAAATCCGAACGGTCGGCAACATCAAGCACCCAAACTTGATCACTTCGGAAGATTTTTGGCTGGGAAAAGCCATGCTCTATTGCTTTACAGATACCATTCTAACGGGAGCCTTTTGTGGGTACAATTGGCTACATTGCGACAGCCAAGAGAAAAAGCTTCAGATGTTTACAGTTACGGGGTGGTTTTACTCGAGCCAATAACGAGAAGGAAGCCGAGATTTGCATATGCCAAATTTGAAACGAAGTAA

Protein sequence

MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREKASDVYSYGVVLLEPITRRKPRFAYAKFETK
Homology
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BLAST of Csor.00g124050 vs. NCBI nr
Match: KAG6581806.1 (hypothetical protein SDJN03_21808, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187 bits (475), Expect = 7.53e-60
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREK 60
          MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREK
Sbjct: 1  MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREK 60

Query: 61 ASDVYSYGVVLLEPITRRKPRFAYAKFETK 90
          ASDVYSYGVVLLEPITRRKPRFAYAKFETK
Sbjct: 61 ASDVYSYGVVLLEPITRRKPRFAYAKFETK 90

The following BLAST results are available for this feature:
BLAST of Csor.00g124050 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g124050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581806.17.53e-60100.00hypothetical protein SDJN03_21808, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g124050 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g124050 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.510.10Transferase(Phosphotransferase) domain 1coord: 19..89
e-value: 9.5E-6
score: 26.7
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 19..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g124050.m01Csor.00g124050.m01mRNA