Csor.00g123470 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATTCCCCATCACAATTGCTTTCCTTTTCATGGCGGTGATGGTGGCGCTTCTGAGCGGAGCTCGTGTGGCGGAGGCGGTGAACTGCAGCCCTATGGAGCTGTCCTCATGTGCGGGGGCCATCACGTCGTCGTCGACCCCATCCAGCACTTGTTGCAACAAGTTGAGAGAGCAAAAACCATGCCTTTGCGGTTATATAAGGAATCCAGCTTTGAGGCCTTACGTGCAATCTCCTGGCGCCAGAAATGTTGCTGCCAAGTGTGGCGTTCCCTTCCCCAGCTGCTAG ATGAAGAAATTCCCCATCACAATTGCTTTCCTTTTCATGGCGGTGATGGTGGCGCTTCTGAGCGGAGCTCGTGTGGCGGAGGCGGTGAACTGCAGCCCTATGGAGCTGTCCTCATGTGCGGGGGCCATCACGTCGTCGTCGACCCCATCCAGCACTTGTTGCAACAAGTTGAGAGAGCAAAAACCATGCCTTTGCGGTTATATAAGGAATCCAGCTTTGAGGCCTTACGTGCAATCTCCTGGCGCCAGAAATGTTGCTGCCAAGTGTGGCGTTCCCTTCCCCAGCTGCTAG ATGAAGAAATTCCCCATCACAATTGCTTTCCTTTTCATGGCGGTGATGGTGGCGCTTCTGAGCGGAGCTCGTGTGGCGGAGGCGGTGAACTGCAGCCCTATGGAGCTGTCCTCATGTGCGGGGGCCATCACGTCGTCGTCGACCCCATCCAGCACTTGTTGCAACAAGTTGAGAGAGCAAAAACCATGCCTTTGCGGTTATATAAGGAATCCAGCTTTGAGGCCTTACGTGCAATCTCCTGGCGCCAGAAATGTTGCTGCCAAGTGTGGCGTTCCCTTCCCCAGCTGCTAG MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCGYIRNPALRPYVQSPGARNVAAKCGVPFPSC Homology
BLAST of Csor.00g123470 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 7.4e-22 Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 9.1e-20 Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 7.2e-17 Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.3e-13 Identity = 35/86 (40.70%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 5.3e-12 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of Csor.00g123470 vs. NCBI nr
Match: KAG6581748.1 (hypothetical protein SDJN03_21750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189 bits (480), Expect = 2.01e-60 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Csor.00g123470 vs. NCBI nr
Match: XP_022955426.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata]) HSP 1 Score: 187 bits (474), Expect = 1.65e-59 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Csor.00g123470 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 135 bits (340), Expect = 4.53e-39 Identity = 65/96 (67.71%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of Csor.00g123470 vs. NCBI nr
Match: XP_038897809.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 134 bits (338), Expect = 9.42e-39 Identity = 64/86 (74.42%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of Csor.00g123470 vs. NCBI nr
Match: KAG5247372.1 (non-specific lipid-transfer protein [Salix suchowensis]) HSP 1 Score: 125 bits (313), Expect = 5.40e-35 Identity = 58/87 (66.67%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy TrEMBL
Match: A0A6J1GTR0 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457455 PE=4 SV=1) HSP 1 Score: 187 bits (474), Expect = 8.01e-60 Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1) HSP 1 Score: 135 bits (340), Expect = 2.19e-39 Identity = 65/96 (67.71%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy TrEMBL
Match: A0A5N5N2V7 (AAI domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_005920 PE=4 SV=1) HSP 1 Score: 124 bits (311), Expect = 4.05e-35 Identity = 59/84 (70.24%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy TrEMBL
Match: A0A445FAC8 (Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja OX=3848 GN=D0Y65_050031 PE=4 SV=1) HSP 1 Score: 119 bits (299), Expect = 2.66e-33 Identity = 53/71 (74.65%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Csor.00g123470 vs. ExPASy TrEMBL
Match: A0A4P1RS00 (AAI domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_22373 PE=4 SV=1) HSP 1 Score: 119 bits (299), Expect = 3.76e-33 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Csor.00g123470 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 107.8 bits (268), Expect = 4.8e-24 Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Csor.00g123470 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23 Identity = 52/90 (57.78%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of Csor.00g123470 vs. TAIR 10
Match: AT5G38195.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14 Identity = 40/96 (41.67%), Postives = 54/96 (56.25%), Query Frame = 0
BLAST of Csor.00g123470 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 0
BLAST of Csor.00g123470 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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