Csor.00g123450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAGGCTTTGCCTTATGGTGGCAGTGATGACGATGGTGGCGCTCCTCACTGGAGATGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG ATGAAGAAAAGGCTTTGCCTTATGGTGGCAGTGATGACGATGGTGGCGCTCCTCACTGGAGATGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG ATGAAGAAAAGGCTTTGCCTTATGGTGGCAGTGATGACGATGGTGGCGCTCCTCACTGGAGATGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG MKKRLCLMVAVMTMVALLTGDGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC Homology
BLAST of Csor.00g123450 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.4e-19 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.0e-16 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 4.3e-14 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 9.5e-14 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 9.5e-14 Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of Csor.00g123450 vs. NCBI nr
Match: KAG6581740.1 (hypothetical protein SDJN03_21742, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581742.1 hypothetical protein SDJN03_21744, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581745.1 hypothetical protein SDJN03_21747, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581746.1 hypothetical protein SDJN03_21748, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193 bits (490), Expect = 5.18e-62 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g123450 vs. NCBI nr
Match: XP_023527041.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176 bits (446), Expect = 2.68e-55 Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Csor.00g123450 vs. NCBI nr
Match: KGN53815.1 (hypothetical protein Csa_014873 [Cucumis sativus]) HSP 1 Score: 139 bits (351), Expect = 1.05e-40 Identity = 67/93 (72.04%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Csor.00g123450 vs. NCBI nr
Match: KAA0064159.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02870.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 135 bits (340), Expect = 5.00e-39 Identity = 65/93 (69.89%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Csor.00g123450 vs. NCBI nr
Match: KAB2611859.1 (non-specific lipid-transfer protein 2-like [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 112 bits (281), Expect = 4.20e-30 Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy TrEMBL
Match: A0A0A0KW09 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141230 PE=4 SV=1) HSP 1 Score: 139 bits (351), Expect = 5.10e-41 Identity = 67/93 (72.04%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy TrEMBL
Match: A0A5A7VF50 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00770 PE=4 SV=1) HSP 1 Score: 135 bits (340), Expect = 2.42e-39 Identity = 65/93 (69.89%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy TrEMBL
Match: A0A5N5G8U2 (Non-specific lipid-transfer protein 2-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019891 PE=3 SV=1) HSP 1 Score: 112 bits (281), Expect = 2.03e-30 Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy TrEMBL
Match: A0A540MBG3 (AAI domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_018319 PE=3 SV=1) HSP 1 Score: 108 bits (270), Expect = 9.61e-29 Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Csor.00g123450 vs. ExPASy TrEMBL
Match: A0A4S4CYQ9 (AAI domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017064 PE=4 SV=1) HSP 1 Score: 108 bits (271), Expect = 1.24e-28 Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Csor.00g123450 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 1.3e-18 Identity = 39/94 (41.49%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Csor.00g123450 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of Csor.00g123450 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Csor.00g123450 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14 Identity = 31/88 (35.23%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of Csor.00g123450 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14 Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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