Csor.00g123430 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACCTTCATAGCTCAGGCCTTTGCCTTCTCGTGCTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGCAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCAGGGGCGCGGCCTACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAGCAACCATGCTTTTGTGGGTATCTAAAAGATCCAAGGTTCAAACCTTATGTACAATCTCCTCGCGCCAGAATGGTTGCTTCCATCTGCCATATCGCCGTCCCTAGGTGCTAG ATGAAGAACCTTCATAGCTCAGGCCTTTGCCTTCTCGTGCTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGCAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCAGGGGCGCGGCCTACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAGCAACCATGCTTTTGTGGGTATCTAAAAGATCCAAGGTTCAAACCTTATGTACAATCTCCTCGCGCCAGAATGGTTGCTTCCATCTGCCATATCGCCGTCCCTAGGTGCTAG ATGAAGAACCTTCATAGCTCAGGCCTTTGCCTTCTCGTGCTGGTGGCGATTCTCACCGGAGCTCACGTTGGGGAGGCGGTGAGTTGCAACCCCACGGAGCTGAGTCCATGTCTCAGTGCAATCACGTCAGCAGGGGCGCGGCCTACAGTTGCTTGCTGCCGGAAGTTGAAGCAGCAGCAACCATGCTTTTGTGGGTATCTAAAAGATCCAAGGTTCAAACCTTATGTACAATCTCCTCGCGCCAGAATGGTTGCTTCCATCTGCCATATCGCCGTCCCTAGGTGCTAG MKNLHSSGLCLLVLVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQPCFCGYLKDPRFKPYVQSPRARMVASICHIAVPRC Homology
BLAST of Csor.00g123430 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 8.4e-18 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.6e-16 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 5.1e-15 Identity = 43/85 (50.59%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-14 Identity = 42/85 (49.41%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Csor.00g123430 vs. NCBI nr
Match: KAG6581741.1 (hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581744.1 hypothetical protein SDJN03_21746, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (501), Expect = 1.17e-63 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of Csor.00g123430 vs. NCBI nr
Match: KAA0064158.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02871.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 131 bits (329), Expect = 1.95e-37 Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Csor.00g123430 vs. NCBI nr
Match: KGN53813.1 (hypothetical protein Csa_015036 [Cucumis sativus]) HSP 1 Score: 130 bits (326), Expect = 5.75e-37 Identity = 60/96 (62.50%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of Csor.00g123430 vs. NCBI nr
Match: XP_022158506.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 122 bits (305), Expect = 9.66e-34 Identity = 65/99 (65.66%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of Csor.00g123430 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 112 bits (281), Expect = 4.24e-30 Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy TrEMBL
Match: A0A5D3BT00 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00780 PE=4 SV=1) HSP 1 Score: 131 bits (329), Expect = 9.43e-38 Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy TrEMBL
Match: A0A0A0KW80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141210 PE=4 SV=1) HSP 1 Score: 130 bits (326), Expect = 2.78e-37 Identity = 60/96 (62.50%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy TrEMBL
Match: A0A6J1E135 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111024980 PE=4 SV=1) HSP 1 Score: 122 bits (305), Expect = 4.68e-34 Identity = 65/99 (65.66%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 2.05e-30 Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of Csor.00g123430 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1) HSP 1 Score: 111 bits (277), Expect = 8.85e-30 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of Csor.00g123430 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 6.6e-18 Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of Csor.00g123430 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 83.6 bits (205), Expect = 9.6e-17 Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of Csor.00g123430 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Csor.00g123430 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15 Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of Csor.00g123430 vs. TAIR 10
Match: AT5G38195.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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