Csor.00g122980 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g122980
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionGlycine-rich RNA-binding family protein
LocationCsor_Chr04: 18797139 .. 18800486 (-)
RNA-Seq ExpressionCsor.00g122980
SyntenyCsor.00g122980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCGAAGGACGAGTACCGAATATTTGTTGGAGGACTCTCGTGGAACGTGTCGGAGCGTGAGCTTGAGAACGCTTTCAGCCGCTACGGCAAAATAATTGAAACTCAGGTAACTTTCGTCCCTTCCCCCGTTTTTTGTGTGCCTCCTATTTGCTTGTTGGTTGAATGTCATGGTGAAAAGGAAATGTGGCTTGTACTCTGAAGAAAAGTCTAAATGATTCGGCATGCGTGAGGTAGAAAATATGACAATGTAAATGCCGTTTTATGTCGAGGACGTTTTTTGAGCGTTTTTATGATGAAAATCCCTGCTATGATTTTTACGACATTCGTAATAGGTTGTCGGCTTTCCCTTTCCACAATTCATGCCAAATACCAATGCTATTTTGTTAGTTGCAGAGTCCCTCCATTTGCGTCTGCCATGGTTTTAATACGGTGTATTTATAATATCTCTAGTCTATCCTATGTCCTTTATTTATTTTTTATACGTTAGTTGAGCCATCAGTATGCATTGATTTATTTAAGCCATATATGAATCAGAATACTTCAGATGAGTTTTAACTACACGATTATAGCTAATAATTTGTTTCAGGCTTTCTCTTTCTTACCGTCCTTTGATCATTTGTTTTGTTGAATATGGTCCAGGCAGTCAGCTTAATGCTGAATACATGGGTCTGTTCGCACATTATCTGCTGAATTCTTACTTATAATAGGAGAAATGGTTAATAGACAAGAAATCCTATTCATCAGTATACATATATTGCAAGAAATTGCTTGGAAACTGACAGTATTTTTTAAGAAAAGCATTTTCAGAATAATGTTTCAGAAAGGATGCTCAGTTCATTCTCTTAGGATATCTGATGAGACGTTTCTTCTGTGTGGTTGATTTTGTGGATGAGAAATCGCAGCTAGCCCAATTTGTGAAAATTGTCAAGACACTTCGCTTCAAAAACTGAAATTTTAGTGTTCAACATACAGTTTGCTGATGTAGTTTCCTACTCGTCAGAGTAAAAGATTGGGTAATAATTGTATTTCGTGGAGATGTATCTGCTGCCACGTGTTGTTAGTATGCCTCAATTCCTCGACAATCCACAGATTGAATTTGGGTATAAGTTGTTGGATTGAGCAGATGCTTCTAGAACTCCAAATATTCAGTTTTTTTTTGTTCATTCTACAACGGGCCTTCTATCCTAAAAGATTTTGCAAAGTATTCCATACCTAATCTCTGCTCTTTTTAGTTTCAAGAGCATTTAACTTGATTTGTATTGCCTAATTCAGCTACAGAGTTTGGTTATGTTCTTGCTCAGTCAGTGTAAATAGTGAGCACATGCATTCAATAGGGAATGCAGTATCATCTGTCATGCTGTTGGTTGCTGTGTAAGGTTCGTGCTTGGCACTGTGCAAAATTTGGAATTGGAACTTACTATACCTAAACTAGGATGTACTGTTCTTGACTTCTAGTGCTTCCGTATGTTCATGATTTTTTGGGTGCTTTGGCATGGAAGGGCAGGCTGTTGGTAAAATATTTTAAAGTTAGTTCACCAGAGAAAATTTCAGACACTGTAATTTCAGTTGTAAACCATCTTTCACCAAATCTATAAACGCACCCATAATGACAAAAAAGGATAATAATAATATAACTACCACATATTTTGTCGCACACTGGAGCTTCAGGTGCAGTACTTTTTTCATTTGTCATTACATCCTGCTGCATGCCAGTATTCTTGGGTATAAGTGACCTATCTGTCTCCACAGTTAAATTATGCTGGTTGTTCGGTAAATTATAAAGGTGGAAACCCAGTTTACAGCATAAGATAAGAATAGCATCTAAAGTGCGGAAAGTTTTTAATGCACTGTTGTACTTTGTTTACTGTGGCATTGGATTGGGTGGTAGCGTGACACAGAGAATCATTATGGCAAGAAATTGTATCTCCCCTAGATTTTTCTTCTCAATTTATTGGTTTCTAGACTCTAGGGTGATTTATGACTCGGTTATGAACAATGGAATATTGCCTGAATGCTACAATTAGTTAAGGCTACGGAGTGGTAGTGGAGTAATTTCAGTAACCAGTAGAAGGGTTGCCTTGGGTGGTCATCTCAGTGGGAGATATTCTCTTTAACTTTTAGAGCTTAAGATTCTGACTTTATGATGGGTCATTTCCTAATTTGCACCCAAAGAGGGTAGTCGAGGTCAAAGTTGCTCTTTAAATGATAGATTCGAGGTGTTGAAGACAGCTTATCTAACAGTGTTCAAGTTGTTGGCAACCTTGCCAGGGCTTTGAAGAGAAATCCTTCCAAGTATATCATTTAAATTTGCTACTTAAATGATTTGCTTGGAAGGGAAAGTAAGTTATCAGAATTTTCGATCGTTTTCTTCGAAGTCTATTCCTTGCACAGCTATCTTGCATAACTATAAAACATTTTCATAGTCTAAGTTGGAATTGAACTGTATTTATTAATATTTGCATGAGATTCTCTTGTGATGTTTATGTAGATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGATCGTCGAGGGATGGATGATGCAATAAGAGAGATGCATGGGCATGAATTTGGTGAGCGGATTATCTCAGTAAATAAAGCTGAACCCAAGATGGAGGGAGATGATAGAGAGCCAGGTTTCAGGGGAGGAGGCTATTCATCTGGTGGTAGGGCTAGTTTTGGGAGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTGTCCTTCAGCCGGAGGTGGACGTGGTAGGGGTAGAGGTTCATTTTCATCGCGTTCTCGATTTGATGGTGATAGTCGTGGGGATCGTTTTGGAGGAGATCGTGACCGGTATGTCGATGACCGTTATGATGGAGGGCGAGATGGGGGGCGCTACGGTGATAGAGATCGTTTTGACCGTAGGGATGACAAGTATGGAAGTCGAGACCGCTATTTTGACGACAGGTAGTTCTGATTGTGATAAATGATCACCCATTTACATATCTTCCGAAGTATGATTTGATTGCTTTACATCTGCGATTGTGTATGCAAACTCTGCAGGTACCCATCTGCTGGAGATCGTTTTGCAGGTGGTGATCGGTATGATGTTAGTGATCGATATCCTCAAAATGGCTACGTCAAAGACAGAGGTGGCTACGATAGGGATATTGGTCCCAGGAGTGGCAGTGATAGGTATGGTACTGGAGGAGGTCCTGGCCGTTACGAGGGAAGAAGTTACAGAGATAGGCCAGGCCCTTACGACCGCCCAAGCAGGGGAGGACGACCGTCTTCCTACGAGCGCTATTAA

mRNA sequence

ATGGCTGCGAAGGACGAGTACCGAATATTTGTTGGAGGACTCTCGTGGAACGTGTCGGAGCGTGAGCTTGAGAACGCTTTCAGCCGCTACGGCAAAATAATTGAAACTCAGATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGATCGTCGAGGGATGGATGATGCAATAAGAGAGATGCATGGGCATGAATTTGGTGAGCGGATTATCTCAGTAAATAAAGCTGAACCCAAGATGGAGGGAGATGATAGAGAGCCAGGTTTCAGGGGAGGAGGCTATTCATCTGGTGGTAGGGCTAGTTTTGGGAGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTGTCCTTCAGCCGGAGGTGGACGTGGTAGGGGTAGAGGTTCATTTTCATCGCGTTCTCGATTTGATGGTGATAGTCGTGGGGATCGTTTTGGAGGAGATCGTGACCGGTATGTCGATGACCGTTATGATGGAGGGCGAGATGGGGGGCGCTACGGTGATAGAGATCGTTTTGACCGTAGGGATGACAAGTATGGAAGTCGAGACCGCTATTTTGACGACAGGTACCCATCTGCTGGAGATCGTTTTGCAGGTGGTGATCGGTATGATGTTAGTGATCGATATCCTCAAAATGGCTACGTCAAAGACAGAGGTGGCTACGATAGGGATATTGGTCCCAGGAGTGGCAGTGATAGGTATGGTACTGGAGGAGGTCCTGGCCGTTACGAGGGAAGAAGTTACAGAGATAGGCCAGGCCCTTACGACCGCCCAAGCAGGGGAGGACGACCGTCTTCCTACGAGCGCTATTAA

Coding sequence (CDS)

ATGGCTGCGAAGGACGAGTACCGAATATTTGTTGGAGGACTCTCGTGGAACGTGTCGGAGCGTGAGCTTGAGAACGCTTTCAGCCGCTACGGCAAAATAATTGAAACTCAGATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTTGGTTTTATTACCTTTGCAGATCGTCGAGGGATGGATGATGCAATAAGAGAGATGCATGGGCATGAATTTGGTGAGCGGATTATCTCAGTAAATAAAGCTGAACCCAAGATGGAGGGAGATGATAGAGAGCCAGGTTTCAGGGGAGGAGGCTATTCATCTGGTGGTAGGGCTAGTTTTGGGAGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTGTCCTTCAGCCGGAGGTGGACGTGGTAGGGGTAGAGGTTCATTTTCATCGCGTTCTCGATTTGATGGTGATAGTCGTGGGGATCGTTTTGGAGGAGATCGTGACCGGTATGTCGATGACCGTTATGATGGAGGGCGAGATGGGGGGCGCTACGGTGATAGAGATCGTTTTGACCGTAGGGATGACAAGTATGGAAGTCGAGACCGCTATTTTGACGACAGGTACCCATCTGCTGGAGATCGTTTTGCAGGTGGTGATCGGTATGATGTTAGTGATCGATATCCTCAAAATGGCTACGTCAAAGACAGAGGTGGCTACGATAGGGATATTGGTCCCAGGAGTGGCAGTGATAGGTATGGTACTGGAGGAGGTCCTGGCCGTTACGAGGGAAGAAGTTACAGAGATAGGCCAGGCCCTTACGACCGCCCAAGCAGGGGAGGACGACCGTCTTCCTACGAGCGCTATTAA

Protein sequence

MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Homology
BLAST of Csor.00g122980 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.6e-80
Identity = 187/306 (61.11%), Postives = 215/306 (70.26%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAK+  RIFVGGLS  V++R+LE AFSR+G I++ QIMLERDTGR RGFGFITFADRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREP-GFRGG---GYSSGGRASFGRGGDRS 120
           MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G RGG   GYS  G+ SFG GG   
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 --VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDG--DSRGDRFGG-----D 180
             VG+DECFKCGR GHWARDCPSAGGGRG   G FSSR+   G  D R DR+       D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 RDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYD-VSD 240
           R+RY+DDRYDG     RYG RDRFD R + Y  RDRY  DRY +  DRFAGGDRY   SD
Sbjct: 181 RERYIDDRYDG---AARYGARDRFDSR-EAYIPRDRYASDRYAAPADRFAGGDRYSRGSD 240

Query: 241 RYPQNGYVKDRGGYDRDIGPRSGSDRYGTG--GGP---GRYEGRSYRDRPG-PYDRPSRG 287
           RYP   Y K R  ++RDI P +GSDRYG G  GGP   G  EGR +R R G PY+RPSR 
Sbjct: 241 RYPPGSYDKAR-SFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRS 300

BLAST of Csor.00g122980 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.8e-72
Identity = 170/297 (57.24%), Postives = 195/297 (65.66%), Query Frame = 0

Query: 6   EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAI 65
           E RIFVGGLSW+V+ER+LE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI
Sbjct: 11  ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70

Query: 66  REMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQDECFKC 125
           + MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G+ +          +DECFKC
Sbjct: 71  KHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT----------EDECFKC 130

Query: 126 GRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVD 185
            RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D
Sbjct: 131 RRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFDRYMD 190

Query: 186 DRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGY 245
            R D  RDGGRY  RDRFD   DKY  RD Y  +RY   GDRF   DRY + + + +N Y
Sbjct: 191 GRRD--RDGGRYSYRDRFD-SGDKYEPRDHYPFERYAPPGDRFV-SDRYGMPEHHLENEY 250

Query: 246 VKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY 290
                 YDRD   R  SDRYG   GP R EGR YR RPGPYDRPSR GGRPSSYER+
Sbjct: 251 RGRERSYDRDRYARDTSDRYG-DMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

BLAST of Csor.00g122980 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.6e-35
Identity = 112/259 (43.24%), Postives = 151/259 (58.30%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDRE-PGFRG--GGYS-SGGRASFGRGGDRS 120
           MD+AI  M+G +   R I+V+KA+P   G  R+  G RG   GY     R S GRGG   
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGG--- 120

Query: 121 VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRY--VDD 180
               +CFKCG+PGH+AR+CPS     G GR S S   R+   S+ DR+G   DRY   +D
Sbjct: 121 ---GDCFKCGKPGHFARECPSESSRDGGGRFS-SKDDRY--SSKDDRYGAKDDRYGAKED 180

Query: 181 RYDGGRDGGRYGDRDRFDRRDDKYGSRD----RYFDDRYPSAGDRFAGGDRYDVSDRYPQ 240
           RY G +D       DR+  +DD+YGSRD    RY  DR   +G+R AGG   D   R   
Sbjct: 181 RY-GAKDDRYSSKDDRYSSKDDRYGSRDGGGSRYGPDR---SGER-AGGRSRDGGSRGAP 240

Query: 241 NGYVKDRGGYDRDIGPRSG 250
            G    R  YDR   PR+G
Sbjct: 241 GGERHSRAPYDR---PRAG 242

BLAST of Csor.00g122980 vs. ExPASy Swiss-Prot
Match: P49310 (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.1e-23
Identity = 73/171 (42.69%), Postives = 98/171 (57.31%), Query Frame = 0

Query: 1   MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRR 60
           MA+ D EYR FVGGL+W   +R LE AFS+YG++++++I+ +R+TGR RGFGF+TF D +
Sbjct: 1   MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  GMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQ 120
            M DAI  M+G +   R I+VN+A+ +  G        GGGY SGG   +G GG    G 
Sbjct: 61  SMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGG 120

Query: 121 DECFKCGRPGHWARDCPSAGGG----RGRGRGSFSSRSRFDGDSRGDRFGG 167
                 GR G +     S GGG    RG G G +    R DG   G  +GG
Sbjct: 121 ------GREGGY-----SGGGGGYSSRGGGGGGYGGGGRRDG-GEGGGYGG 159

BLAST of Csor.00g122980 vs. ExPASy Swiss-Prot
Match: Q03250 (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-21
Identity = 78/188 (41.49%), Postives = 103/188 (54.79%), Query Frame = 0

Query: 1   MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRR 60
           MA+ D EYR FVGGL+W   +R LE AF++YG +I+++I+ +R+TGR RGFGF+TF D +
Sbjct: 1   MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  GMDDAIREMHGHEFGERIISVNKAEPK-MEGDDREPGFRGGGYSSGGRASFGRGGDRSVG 120
            M DAI  M+G +   R I+VN+A+ +   G     G  GGGY SGG   +  GG    G
Sbjct: 61  AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG 120

Query: 121 QDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDG 180
                     G   R+    GGG   G G +SSR        G  +GG R R     Y G
Sbjct: 121 ----------GGGRRE---GGGGYSGGGGGYSSRG-----GGGGSYGGGR-REGGGGYGG 168

Query: 181 GRDGGRYG 187
           G +GG YG
Sbjct: 181 G-EGGGYG 168

BLAST of Csor.00g122980 vs. NCBI nr
Match: KAG6602289.1 (Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 581 bits (1498), Expect = 2.72e-209
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY
Sbjct: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Sbjct: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289

BLAST of Csor.00g122980 vs. NCBI nr
Match: XP_022990423.1 (glycine-rich RNA-binding protein RZ1C [Cucurbita maxima] >XP_022990424.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima])

HSP 1 Score: 580 bits (1495), Expect = 7.79e-209
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY
Sbjct: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           DRDIGPRSGSDRYGTGGGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Sbjct: 241 DRDIGPRSGSDRYGTGGGPGRYEGRNYRDRPGPYDRPSRGGRPSSYERY 289

BLAST of Csor.00g122980 vs. NCBI nr
Match: XP_022961758.1 (glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata] >XP_022961766.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata])

HSP 1 Score: 580 bits (1494), Expect = 1.11e-208
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDVSDRYPQNGYVKDRGGY
Sbjct: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Sbjct: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289

BLAST of Csor.00g122980 vs. NCBI nr
Match: XP_023544240.1 (glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo] >XP_023544248.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577 bits (1486), Expect = 1.84e-207
Identity = 286/289 (98.96%), Postives = 288/289 (99.65%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR
Sbjct: 121 ECFKCGRPGHWARDCPSTGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRDRFDRRDDKYGSRDRYF+DRYPSAGDRFAGGDRYDVSDRYPQNGYVK+RGGY
Sbjct: 181 DGGRYGDRDRFDRRDDKYGSRDRYFEDRYPSAGDRFAGGDRYDVSDRYPQNGYVKERGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Sbjct: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289

BLAST of Csor.00g122980 vs. NCBI nr
Match: XP_022133790.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia])

HSP 1 Score: 533 bits (1372), Expect = 3.64e-190
Identity = 268/289 (92.73%), Postives = 273/289 (94.46%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGGYSSGGR SFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY---- 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRFAGGDRYDVSDRYPQNGYVKDRGGY
Sbjct: 181 DGGRYGDRDHFDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           +RDIGPRSGSDRYG+GG PGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Sbjct: 241 NRDIGPRSGSDRYGSGG-PGRYEGRSYRDRAGPYDRPSRGGRPSSYERY 284

BLAST of Csor.00g122980 vs. ExPASy TrEMBL
Match: A0A6J1JS04 (glycine-rich RNA-binding protein RZ1C OS=Cucurbita maxima OX=3661 GN=LOC111487287 PE=4 SV=1)

HSP 1 Score: 580 bits (1495), Expect = 3.77e-209
Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY
Sbjct: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           DRDIGPRSGSDRYGTGGGPGRYEGR+YRDRPGPYDRPSRGGRPSSYERY
Sbjct: 241 DRDIGPRSGSDRYGTGGGPGRYEGRNYRDRPGPYDRPSRGGRPSSYERY 289

BLAST of Csor.00g122980 vs. ExPASy TrEMBL
Match: A0A6J1HB93 (glycine-rich RNA-binding protein RZ1C-like OS=Cucurbita moschata OX=3662 GN=LOC111462429 PE=4 SV=1)

HSP 1 Score: 580 bits (1494), Expect = 5.36e-209
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR
Sbjct: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF GGDRYDVSDRYPQNGYVKDRGGY
Sbjct: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGGDRYDVSDRYPQNGYVKDRGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY
Sbjct: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289

BLAST of Csor.00g122980 vs. ExPASy TrEMBL
Match: A0A6J1BW89 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006270 PE=4 SV=1)

HSP 1 Score: 533 bits (1372), Expect = 1.76e-190
Identity = 268/289 (92.73%), Postives = 273/289 (94.46%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGGYSSGGR SFGRGGDRSVGQD
Sbjct: 61  MDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFGRGGDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY---- 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           DGGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRFAGGDRYDVSDRYPQNGYVKDRGGY
Sbjct: 181 DGGRYGDRDHFDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           +RDIGPRSGSDRYG+GG PGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Sbjct: 241 NRDIGPRSGSDRYGSGG-PGRYEGRSYRDRAGPYDRPSRGGRPSSYERY 284

BLAST of Csor.00g122980 vs. ExPASy TrEMBL
Match: A0A0A0LQB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G324460 PE=4 SV=1)

HSP 1 Score: 504 bits (1297), Expect = 4.57e-179
Identity = 257/289 (88.93%), Postives = 268/289 (92.73%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MA+KDEYRIFVGGLSWN+SER+LENAF R+GK++ETQIMLERDTGRPRGFGFITFADRRG
Sbjct: 1   MASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRG 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQD 120
           MDDAIREMHG E GERIISVNKAEPKMEGDD E GFRGGGYSSGGRASFGRG DRSVGQD
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMEGDDTEQGFRGGGYSSGGRASFGRGKDRSVGQD 120

Query: 121 ECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDGGR 180
           ECFKCGRPGHWARDCPS GGGRG GRGSFSSRSRFD D RGDRFGGDRDRYVD+RY    
Sbjct: 121 ECFKCGRPGHWARDCPSVGGGRGGGRGSFSSRSRFDSDGRGDRFGGDRDRYVDERY---- 180

Query: 181 DGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGYVKDRGGY 240
           +GGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRF G DRYDVSDRYPQNGYVKDR  Y
Sbjct: 181 NGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFTGSDRYDVSDRYPQNGYVKDR-VY 240

Query: 241 DRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSRGGRPSSYERY 289
           DRDIGPRSGSDRYG+GG PGR+EGRSYRDR GPYDRPSR GRPSSY+RY
Sbjct: 241 DRDIGPRSGSDRYGSGG-PGRHEGRSYRDRTGPYDRPSRVGRPSSYDRY 283

BLAST of Csor.00g122980 vs. ExPASy TrEMBL
Match: A0A6J1BW59 (glycine-rich RNA-binding protein RZ1C-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006270 PE=4 SV=1)

HSP 1 Score: 462 bits (1188), Expect = 4.81e-163
Identity = 234/251 (93.23%), Postives = 236/251 (94.02%), Query Frame = 0

Query: 39  MLERDTGRPRGFGFITFADRRGMDDAIREMHGHEFGERIISVNKAEPKMEGDDREPGFRG 98
           MLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRG
Sbjct: 1   MLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRG 60

Query: 99  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGD 158
           GGYSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD D
Sbjct: 61  GGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSD 120

Query: 159 SRGDRFGGDRDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAG 218
           SRGDRFGGDRDRYVDDRY    DGGRYGDRD FDRRDDKYGSRDRYFDDRYPS GDRFAG
Sbjct: 121 SRGDRFGGDRDRYVDDRY----DGGRYGDRDHFDRRDDKYGSRDRYFDDRYPSGGDRFAG 180

Query: 219 GDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPS 278
           GDRYDVSDRYPQNGYVKDRGGY+RDIGPRSGSDRYG+GG PGRYEGRSYRDR GPYDRPS
Sbjct: 181 GDRYDVSDRYPQNGYVKDRGGYNRDIGPRSGSDRYGSGG-PGRYEGRSYRDRAGPYDRPS 240

Query: 279 RGGRPSSYERY 289
           RGGRPSSYERY
Sbjct: 241 RGGRPSSYERY 246

BLAST of Csor.00g122980 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-81
Identity = 187/306 (61.11%), Postives = 215/306 (70.26%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           MAAK+  RIFVGGLS  V++R+LE AFSR+G I++ QIMLERDTGR RGFGFITFADRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDREP-GFRGG---GYSSGGRASFGRGGDRS 120
           MD++IREMHG +FG+R+ISVN+AEPK+  DD E  G RGG   GYS  G+ SFG GG   
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 --VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDG--DSRGDRFGG-----D 180
             VG+DECFKCGR GHWARDCPSAGGGRG   G FSSR+   G  D R DR+       D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 RDRYVDDRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYD-VSD 240
           R+RY+DDRYDG     RYG RDRFD R + Y  RDRY  DRY +  DRFAGGDRY   SD
Sbjct: 181 RERYIDDRYDG---AARYGARDRFDSR-EAYIPRDRYASDRYAAPADRFAGGDRYSRGSD 240

Query: 241 RYPQNGYVKDRGGYDRDIGPRSGSDRYGTG--GGP---GRYEGRSYRDRPG-PYDRPSRG 287
           RYP   Y K R  ++RDI P +GSDRYG G  GGP   G  EGR +R R G PY+RPSR 
Sbjct: 241 RYPPGSYDKAR-SFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRS 300

BLAST of Csor.00g122980 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 273.5 bits (698), Expect = 2.0e-73
Identity = 170/297 (57.24%), Postives = 195/297 (65.66%), Query Frame = 0

Query: 6   EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAI 65
           E RIFVGGLSW+V+ER+LE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI
Sbjct: 11  ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70

Query: 66  REMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQDECFKC 125
           + MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G+ +          +DECFKC
Sbjct: 71  KHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT----------EDECFKC 130

Query: 126 GRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVD 185
            RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D
Sbjct: 131 RRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFDRYMD 190

Query: 186 DRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGY 245
            R D  RDGGRY  RDRFD   DKY  RD Y  +RY   GDRF   DRY + + + +N Y
Sbjct: 191 GRRD--RDGGRYSYRDRFD-SGDKYEPRDHYPFERYAPPGDRFV-SDRYGMPEHHLENEY 250

Query: 246 VKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY 290
                 YDRD   R  SDRYG   GP R EGR YR RPGPYDRPSR GGRPSSYER+
Sbjct: 251 RGRERSYDRDRYARDTSDRYG-DMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

BLAST of Csor.00g122980 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 273.5 bits (698), Expect = 2.0e-73
Identity = 170/297 (57.24%), Postives = 195/297 (65.66%), Query Frame = 0

Query: 6   EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRGMDDAI 65
           E RIFVGGLSW+V+ER+LE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI
Sbjct: 11  ESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAI 70

Query: 66  REMHGHEFGERIISVNKAEPKMEGDDREPGFRGGGYSSGGRASFGRGGDRSVGQDECFKC 125
           + MHG E G ++ISVNKAEPK+ G+D +   +GGGYSS G+ +          +DECFKC
Sbjct: 71  KHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT----------EDECFKC 130

Query: 126 GRPGHWARDCPSAGGGRGRGRGSFSSRSRF-DGDSRGDRFGG-----------DRDRYVD 185
            RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D
Sbjct: 131 RRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFDRYMD 190

Query: 186 DRYDGGRDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSAGDRFAGGDRYDVSDRYPQNGY 245
            R D  RDGGRY  RDRFD   DKY  RD Y  +RY   GDRF   DRY + + + +N Y
Sbjct: 191 GRRD--RDGGRYSYRDRFD-SGDKYEPRDHYPFERYAPPGDRFV-SDRYGMPEHHLENEY 250

Query: 246 VKDRGGYDRDIGPRSGSDRYGTGGGPGRYEGRSYRDRPGPYDRPSR-GGRPSSYERY 290
                 YDRD   R  SDRYG   GP R EGR YR RPGPYDRPSR GGRPSSYER+
Sbjct: 251 RGRERSYDRDRYARDTSDRYG-DMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

BLAST of Csor.00g122980 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-36
Identity = 112/259 (43.24%), Postives = 151/259 (58.30%), Query Frame = 0

Query: 1   MAAKDEYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRRG 60
           M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGHEFGERIISVNKAEPKMEGDDRE-PGFRG--GGYS-SGGRASFGRGGDRS 120
           MD+AI  M+G +   R I+V+KA+P   G  R+  G RG   GY     R S GRGG   
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGG--- 120

Query: 121 VGQDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRY--VDD 180
               +CFKCG+PGH+AR+CPS     G GR S S   R+   S+ DR+G   DRY   +D
Sbjct: 121 ---GDCFKCGKPGHFARECPSESSRDGGGRFS-SKDDRY--SSKDDRYGAKDDRYGAKED 180

Query: 181 RYDGGRDGGRYGDRDRFDRRDDKYGSRD----RYFDDRYPSAGDRFAGGDRYDVSDRYPQ 240
           RY G +D       DR+  +DD+YGSRD    RY  DR   +G+R AGG   D   R   
Sbjct: 181 RY-GAKDDRYSSKDDRYSSKDDRYGSRDGGGSRYGPDR---SGER-AGGRSRDGGSRGAP 240

Query: 241 NGYVKDRGGYDRDIGPRSG 250
            G    R  YDR   PR+G
Sbjct: 241 GGERHSRAPYDR---PRAG 242

BLAST of Csor.00g122980 vs. TAIR 10
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2 )

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-22
Identity = 78/188 (41.49%), Postives = 103/188 (54.79%), Query Frame = 0

Query: 1   MAAKD-EYRIFVGGLSWNVSERELENAFSRYGKIIETQIMLERDTGRPRGFGFITFADRR 60
           MA+ D EYR FVGGL+W   +R LE AF++YG +I+++I+ +R+TGR RGFGF+TF D +
Sbjct: 1   MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60

Query: 61  GMDDAIREMHGHEFGERIISVNKAEPK-MEGDDREPGFRGGGYSSGGRASFGRGGDRSVG 120
            M DAI  M+G +   R I+VN+A+ +   G     G  GGGY SGG   +  GG    G
Sbjct: 61  AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG 120

Query: 121 QDECFKCGRPGHWARDCPSAGGGRGRGRGSFSSRSRFDGDSRGDRFGGDRDRYVDDRYDG 180
                     G   R+    GGG   G G +SSR        G  +GG R R     Y G
Sbjct: 121 ----------GGGRRE---GGGGYSGGGGGYSSRG-----GGGGSYGGGR-REGGGGYGG 168

Query: 181 GRDGGRYG 187
           G +GG YG
Sbjct: 181 G-EGGGYG 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8RWN51.6e-8061.11Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE... [more]
O227032.8e-7257.24Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE... [more]
Q9LIN33.6e-3543.24Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE... [more]
P493103.1e-2342.69Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba OX=3728 PE=2 SV=1[more]
Q032501.7e-2141.49Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=RBG7 PE=1 ... [more]
Match NameE-valueIdentityDescription
KAG6602289.12.72e-209100.00Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. so... [more]
XP_022990423.17.79e-20999.65glycine-rich RNA-binding protein RZ1C [Cucurbita maxima] >XP_022990424.1 glycine... [more]
XP_022961758.11.11e-20899.65glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata] >XP_022961766.1 ... [more]
XP_023544240.11.84e-20798.96glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo] >XP_023544248... [more]
XP_022133790.13.64e-19092.73glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1JS043.77e-20999.65glycine-rich RNA-binding protein RZ1C OS=Cucurbita maxima OX=3661 GN=LOC11148728... [more]
A0A6J1HB935.36e-20999.65glycine-rich RNA-binding protein RZ1C-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1BW891.76e-19092.73glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=... [more]
A0A0A0LQB54.57e-17988.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G324460 PE=4 SV=1[more]
A0A6J1BW594.81e-16393.23glycine-rich RNA-binding protein RZ1C-like isoform X2 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
AT5G04280.11.2e-8161.11RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.12.0e-7357.24RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT1G60650.22.0e-7357.24RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT3G26420.12.5e-3643.24RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT2G21660.11.2e-2241.49cold, circadian rhythm, and rna binding 2 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 121..137
e-value: 2.7E-6
score: 36.9
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 121..137
e-value: 1.0E-8
score: 34.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 122..137
score: 11.449344
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 8..81
e-value: 8.0E-29
score: 111.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 9..78
e-value: 2.6E-19
score: 68.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 7..85
score: 19.518938
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..117
e-value: 1.3E-31
score: 111.6
NoneNo IPR availableGENE3D4.10.60.10coord: 118..161
e-value: 3.2E-9
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..289
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 1..241
NoneNo IPR availablePANTHERPTHR15241:SF294GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKEcoord: 1..241
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 103..142
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 4..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g122980.m01Csor.00g122980.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding