Csor.00g122960 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g122960
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr04: 18806960 .. 18807223 (+)
RNA-Seq ExpressionCsor.00g122960
SyntenyCsor.00g122960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGTAAGAGATTGTGAACGAGTAGAACAAGAAATACGCAGCAGAAGAAGAAGAAGATTCGGAGTATCTCCTTTGAGGTTGGAGATTTTGGAGGGAAAGTGGGAGCCACGAGAGCAAGAAACGAGTTGTTATTGGGCGTTGAAGGCTTCGGAGGATGTTGGCGGACTTAATGCAGACCACACAATTACTTTTGGACACGAGGAGGAAGAAGAAGCTGGAATTGAATTGGATCCTTTAGCCCAAATCCTTGGAACTCTTTGA

mRNA sequence

ATGGGAGTAAGAGATTGTGAACGAGTAGAACAAGAAATACGCAGCAGAAGAAGAAGAAGATTCGGAGTATCTCCTTTGAGGTTGGAGATTTTGGAGGGAAAGTGGGAGCCACGAGAGCAAGAAACGAGTTGTTATTGGGCGTTGAAGGCTTCGGAGGATGTTGGCGGACTTAATGCAGACCACACAATTACTTTTGGACACGAGGAGGAAGAAGAAGCTGGAATTGAATTGGATCCTTTAGCCCAAATCCTTGGAACTCTTTGA

Coding sequence (CDS)

ATGGGAGTAAGAGATTGTGAACGAGTAGAACAAGAAATACGCAGCAGAAGAAGAAGAAGATTCGGAGTATCTCCTTTGAGGTTGGAGATTTTGGAGGGAAAGTGGGAGCCACGAGAGCAAGAAACGAGTTGTTATTGGGCGTTGAAGGCTTCGGAGGATGTTGGCGGACTTAATGCAGACCACACAATTACTTTTGGACACGAGGAGGAAGAAGAAGCTGGAATTGAATTGGATCCTTTAGCCCAAATCCTTGGAACTCTTTGA

Protein sequence

MGVRDCERVEQEIRSRRRRRFGVSPLRLEILEGKWEPREQETSCYWALKASEDVGGLNADHTITFGHEEEEEAGIELDPLAQILGTL
Homology
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BLAST of Csor.00g122960 vs. NCBI nr
Match: KAG6602291.1 (hypothetical protein SDJN03_07524, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181 bits (458), Expect = 2.38e-57
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MGVRDCERVEQEIRSRRRRRFGVSPLRLEILEGKWEPREQETSCYWALKASEDVGGLNAD 60
          MGVRDCERVEQEIRSRRRRRFGVSPLRLEILEGKWEPREQETSCYWALKASEDVGGLNAD
Sbjct: 1  MGVRDCERVEQEIRSRRRRRFGVSPLRLEILEGKWEPREQETSCYWALKASEDVGGLNAD 60

Query: 61 HTITFGHEEEEEAGIELDPLAQILGTL 87
          HTITFGHEEEEEAGIELDPLAQILGTL
Sbjct: 61 HTITFGHEEEEEAGIELDPLAQILGTL 87

The following BLAST results are available for this feature:
BLAST of Csor.00g122960 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g122960 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602291.12.38e-57100.00hypothetical protein SDJN03_07524, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g122960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g122960 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g122960.m01Csor.00g122960.m01mRNA