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Csor.00g122430 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGATTCTGATGCTTCATACATACATATGGTACTTACCTTCTTCATTATACGACCTAAATCCGTTCTATTTGCATTACGTACGTACGTTAATTATACTTTGATGTAGGTACAACATTTGATCGAGAAGTGTCTGATCTTCCGCATGACCAAAGAAGAGTGCATGGACGCCCTCTCCAAACATGCAAATATTTCACCCATCATCACGTCAACAGGTAGTAGTAGTAGTAGTAGTAGTCTTTCATTGTTTCAATCAAACCCTTGAACGTTATGATTGAGCTAAGCCGTTCCATATTATGCAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGACATATGCACAATCTCAAAGAGACAAGGATAGAATGTCTGAGGAAGAGACAAATCAAATGATCCAACGGATGATCTCGAAATCCTCGAAAGGGGACCCTAAAAACTAAGCCTGCCACGAAAACGACCTCACCTTCAAGTTTCTTCTTCCTTACTTCAAGAATCTATCATCGCTTTCAAATAAAACCCACATAGAGAATATGTTTGAGGTCCCATTGGTTGAAACAAATCATATGCAAATGAGTACGGAGTGTTCCATTGTTTGTGTAATTGTCATGTTCTTCCTTATAACCAATCATCTTGTGCCATGTCATTATATATTTATTTGAAGGTATTAGTTGTTGAATGTTGTTCATTGACTCGTGCTACCTCGGGAAAGCTTTCTTGTCTTATTGTTATTGCAATCACATCAATGAAGATAGCTCATATTGATGTGGGGACAATTGGGAAGTTGGCTTTTTTCTTGTTCAAATCATGAACTTTTACACGGTATTTGAAGGCGACCTTATCGCTTTCGTTTCGTCACGGGTCCATAATCAATACATCGACGCGTATTTCATTTGAATTTGGATGTTAAGATATTGGATGAAAAATAGATGTCTTAATCTCGATCTTTTAAACTTAATTCAGACGATTAGTATGTTCATTTCCACACGTTCTTGCTATGCTTTAGTTATATCTCTCTATTCTCTCCATGCTCTTGTTCTCGATTTCAAACCTACTATATTCGTCAACCCTCCATACACTCAACTCGATCACCCAACTCAATTTTCCTTTAAGTTCATGCACAATCGACACCTAAATCTTAGACCTTAACACAATTCAGGCATCAATATGTCCCCTCCATTTGTTTCTGCAACCTAGCTTTGATATTAAATGTTGGATATGACCCACGATCGAAATATATTGAAACAAATATTAGAAGCAGAAAGAACAAGTTGAGGGGAGAATTTCATGCTCTTAAATTCTCTTTCTTGTAGTGAATAAAACAATTATGGTTTTAAATTATCTTTGAAGTTAATAACTTCTTTTGGTAAGCCAAGCTTATTAACTCATAAGTACATGTAGTCGTAGTGTCAATCAATTTAGATATCCAAAAATAAAGTTAATAAGAAAATTGAAAGGGTATGAACTTCATCAAATAGGGCATAGATTTTTAATCTTTGAGCACTTCGATAAATAGAGATCGAACATGATGCGATATTGCATAAAGATTTTTTTTAGAGATTTTGTGGTTGAAGATGAGGATGTGAAGTTATGAAAGAGGACAAAGGTTTTTAATTTTCGAGCACGTTATATGGTCCAACTGAGGAGGCATGGTGATAGTTCTCGAAGTTTTTAACTTTTGTCTGAATAATAATGAAACAGCGAAGCAGAAAACAATTACGCATCCTTTTTGTAAATTTTAAACGAAGGACAATTATCTCGAAGTTTTTAATTTTTGTCTGAATAATAATGAAAGAGCGAAGCAGAAAACGACGAAGCGTTTGTCATGTTACGCATTCTTTTGTAAATTTTAAACAAAGGACAATTATGACATTTCACTTCGGATAACAGAAATATAATCTTATATCTTTAAGCTTAGAGAAGCAGAGTGTTAATTGAACACGACTCTCACAGTTGTGTGATATTGTTCACTTTGAGCATAACCTCTTATGACTTTACTTTGTGCTTCTCAAAAAACCTCGTACCAATGGAGATAGTATTCTTTGATTATAAACGGATCATTCATTCGCTAAATTAGCTAACGTGGGACTTTCAGAAAGCCGGGAAATAACAAAGTAACTAAGTATTGAATCTCTTGCTTGTTTTTAAACCTACAAAAGAGCTGGAAGTTTTGTTCTAATGGGTTTCTATAAAGGAAAGTTTGGACGACCATTTCTTGGTTAACCTAACCAAATGAATATGCTTCAATGGCTTAAGTCTGTTAACAGAAACCCTACCGGCGACCAAGTGTGCAACAGCTACAACATCGTCGGCCTGTCGAATGACTTGGACATGACAGGCTTGTCTGGTGTCGTGGTCTGTTCTGTAAAACATTTTTTCTCTTCTTCCGATGTTGACAATACTCATTTCGAGTATGGGGACCGTTTTGTGCAGCGCCAAACTTAA ATGGCAGATTCTGATGCTTCATACATACATATGGTACAACATTTGATCGAGAAGTGTCTGATCTTCCGCATGACCAAAGAAGAGTGCATGGACGCCCTCTCCAAACATGCAAATATTTCACCCATCATCACGTCAACAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGACATATGCACAATCTCAAAGAGACAAGGATAGAATAAACCCTACCGGCGACCAAGTGTGCAACAGCTACAACATCGTCGGCCTGTCGAATGACTTGGACATGACAGGCTTGTCTGGTGTCGTGGTCTGTTCTGTAAAACATTTTTTCTCTTCTTCCGATGTTGACAATACTCATTTCGAGTATGGGGACCGTTTTGTGCAGCGCCAAACTTAA ATGGCAGATTCTGATGCTTCATACATACATATGGTACAACATTTGATCGAGAAGTGTCTGATCTTCCGCATGACCAAAGAAGAGTGCATGGACGCCCTCTCCAAACATGCAAATATTTCACCCATCATCACGTCAACAGTGTGGACCGAGTTAGAGAAGGAAAACAAGGAATTCTTCGAGACATATGCACAATCTCAAAGAGACAAGGATAGAATAAACCCTACCGGCGACCAAGTGTGCAACAGCTACAACATCGTCGGCCTGTCGAATGACTTGGACATGACAGGCTTGTCTGGTGTCGTGGTCTGTTCTGTAAAACATTTTTTCTCTTCTTCCGATGTTGACAATACTCATTTCGAGTATGGGGACCGTTTTGTGCAGCGCCAAACTTAA MADSDASYIHMVQHLIEKCLIFRMTKEECMDALSKHANISPIITSTVWTELEKENKEFFETYAQSQRDKDRINPTGDQVCNSYNIVGLSNDLDMTGLSGVVVCSVKHFFSSSDVDNTHFEYGDRFVQRQT Homology
BLAST of Csor.00g122430 vs. NCBI nr
Match: KAG6602344.1 (hypothetical protein SDJN03_07577, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 268 bits (685), Expect = 1.31e-90 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Csor.00g122430 vs. NCBI nr
Match: XP_022921441.1 (uncharacterized protein LOC111429717 [Cucurbita moschata]) HSP 1 Score: 146 bits (369), Expect = 6.41e-43 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Csor.00g122430 vs. NCBI nr
Match: XP_023543624.1 (uncharacterized protein LOC111803423 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145 bits (366), Expect = 1.83e-42 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Csor.00g122430 vs. NCBI nr
Match: XP_022133966.1 (uncharacterized protein LOC111006373 isoform X1 [Momordica charantia]) HSP 1 Score: 133 bits (335), Expect = 9.60e-38 Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of Csor.00g122430 vs. NCBI nr
Match: XP_022921429.1 (uncharacterized protein LOC111429709 [Cucurbita moschata]) HSP 1 Score: 132 bits (331), Expect = 4.02e-37 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Csor.00g122430 vs. ExPASy TrEMBL
Match: A0A6J1E1E4 (uncharacterized protein LOC111429717 OS=Cucurbita moschata OX=3662 GN=LOC111429717 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 3.10e-43 Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Csor.00g122430 vs. ExPASy TrEMBL
Match: A0A6J1BWN4 (uncharacterized protein LOC111006373 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006373 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 4.65e-38 Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0
BLAST of Csor.00g122430 vs. ExPASy TrEMBL
Match: A0A6J1E0G0 (uncharacterized protein LOC111429709 OS=Cucurbita moschata OX=3662 GN=LOC111429709 PE=4 SV=1) HSP 1 Score: 132 bits (331), Expect = 1.94e-37 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Csor.00g122430 vs. ExPASy TrEMBL
Match: A0A6J1JTG8 (uncharacterized protein LOC111487343 OS=Cucurbita maxima OX=3661 GN=LOC111487343 PE=4 SV=1) HSP 1 Score: 128 bits (322), Expect = 4.55e-36 Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = 0
BLAST of Csor.00g122430 vs. ExPASy TrEMBL
Match: V4TI04 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033177mg PE=4 SV=1) HSP 1 Score: 127 bits (320), Expect = 8.90e-36 Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = 0
BLAST of Csor.00g122430 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25 Identity = 52/74 (70.27%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of Csor.00g122430 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 101.7 bits (252), Expect = 4.6e-22 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0
BLAST of Csor.00g122430 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 99.0 bits (245), Expect = 3.0e-21 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Csor.00g122430 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function ) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16 Identity = 34/56 (60.71%), Postives = 47/56 (83.93%), Query Frame = 0
BLAST of Csor.00g122430 vs. TAIR 10
Match: AT1G10657.3 (Plant protein 1589 of unknown function ) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16 Identity = 34/56 (60.71%), Postives = 47/56 (83.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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