Csor.00g121720 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g121720
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRibosomal RNA-processing protein 8
LocationCsor_Chr04: 19533107 .. 19536259 (-)
RNA-Seq ExpressionCsor.00g121720
SyntenyCsor.00g121720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGGGAGGGCCGCTCAAGCAAAAAGCGCAAGAGGGCGATGCGTCGTGGAGCAGACAAAAACCAAGACATCGTTGTTTCTGGTTCTTCCGACGCCCCAAAATCTCAGAGGCTTTCCGGTTCGTCTAGTTTTCTCGATAAGGTTCGACTGATTTTTTAAACTAATCTCGTTCTGAAATCAATTGGTTTTGGGAATTTAAGGATTAACTGAACGTAATTGTGGTTGGGTGATGTTGCAGATGCGAGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACCTGCACGTAATGGTTTTGTCTTCTATTCTTTTATTTTTCGTCTTGTTCTAGTTTTTACTGATGAGTTTGTGTGTTTCTTTATGTGTGCACTACTTTTTGAGTCTCAAGTTTATGTTATCTCAAAATTTTCAGTTTTCTATCAGCTGAATCTTGAAACAGAGTTATTGAACTTGAGTTTTACCAATTTATTTTTAAGTCAGACCCACATTGTTTGAAACCAATTGATCTTTTTGTGTGTGTGTGTGTATGTGTGTGTGTGTTTCAGAGGGGAAGAGGCGCTTAGTTATTTCAAAGAAGACCAGGTTCTGTTTGATGTTGTAAGTTCTGCCCGTCTGTTCTTGCTTCCTAAACGTAGTTTCTGTTACTATTTAAGAACTAGTTTCTTCACGCGACGCACACAGCAGAAGTTTATCTCTTTCTTCACAGCAAAGTATTTTCAGTAGATGAAGCTTTAATGTTGAGTATATAATCATGAATATGGAATTTCTATGCACTGATCCTTGAGAAAGGTTTAGACGTAAATTGCATGTACCAGGCCTAGGACTAGGGTTAATTAACGTTTTGATGGGTAGTATCATACAGGATACCAAGAGCAAATGTCGCATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTGAAAGAGCACGATCCTTCATTTATGATAGCTGATTTTGGCTGTGGTGAGTATTAGAAAAAAATCTTTTGTTTCCCTTTCGTTACTTTACTAAATATTGATAAAGTATTGTTCATTTATCCTTCAAGAACATTCATTCTTATTTGTTCATTTATCTCTTCTTTCCTCCAAACTGAATTACAGGGGATGCACGCCTTGCTAAAAATGTGAAGAATAAAGTTTTCTCGTTTGATCTGGTTTCCAAAGATCCTTCTGTTGTTGCTTGTGATATGTCAAAAGTGCGCACTCTATTTGAACTTATTGTCATCAGATGCATTGAGACGTATAACTGCATTTCATGCATGAAAGTTAGCCATATTGGTATCATTTTCCCCTTGCAGGGGATTGTGCAGCTGTCTTATAAAGTTGTATTGGTTTTGCTAAAGCTCCGTTGTTACTTTTTACTTTTTAACAACTAGCAAGTTGTTTTTAAAAAAATTACACTCCTTTGGTATTAAATTTATTTTATTTTTACATTTGGCGACACATTGGGTAACAACCCAAGCTCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCTCTTTTGGGATTCCCCTCAAGGTTTTTAAAATACGTCTGCTAGGGAGTGGTTTCCACACCCTTATAAAGAATGCTTAGTTCTCCTCTCCAACCGATGCATTCGAGGCCCAGCGTCCTTGTTGGCACTCGTTTCCCTCTCCAATCGATGTGGGATCTCACAATCCACCTCCCTTCGGGGCCTACATCCTCGCTAGCACTCGTTCCTCTCTCCAATTGATGTGGGATCTCACAATCTACCCCCCTCGGAACCCAGCGTCCTTGTTGGCCCACCACCCGATGTTTGGTTCTAATACCATTTGTAACTGCCCAAGCCCACCGCTAGCAAATATTGTCCTCTTTGGACTTTCCCTTTTAGGTTTCCCCTTAAGGTTTTTAAAACATGTCTGCTAGGGAGAGGTCTCCACACCCTTTATAGAGAATGCATAGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCTCCTTCAGGGCCCAGCGTCCTCGCTGGCACTCATTCTCTCTTCAATCGAGGTGGGATCTCACACATTGGTTAGAATCAACCTTGGGAGACTGAGTCATGACTCTCATGGTAAATTGCTATTAGTGATTGGAGTGGGACGTAAAGAAGATGATAACTTGTATGGTACATAAATGTCAACTATCACACTCATTACATACAGCTATAGTTTAGAGTAATTGGATGATATAATCTATTTCATCTCAACAGGTGCAGTTTTAGAATGATATTAGCTATCTATATTAAAAAAAATTGAGGTCTTGTCGAGGTTAGTTGGATAATTGATATAACAGTGCTTTGAAACATATGCCATTTATTTCTAATCGTGTTATTTGAGCAACCATTGTTGCTATCCTGTTCTACCAAGAATCCCCATGCTGATGATTATATATATATATATATATATATATATATATATATATATATATATATATGTCCATAGGAGCATTACATAATACCCATCACTTTTATTTTTCTGTCCATGAAATTTAGATTAATCTCATTGGCTGTTATCTTCGAGAAAGAAACCTCTAAACGCTGGCTAATGTTTATGACCTATGGCAGACACCTCTGGACTCTTCATCTGTGGATGTTGCTGTGTTTTGTCTTTCACTTATGGGGATCAATTATGAAAGTTACTTGGCAGAAGCACAAAGAGTACTTAAACCACGGTTGGTGGGCTACTTTTTGGCCCTCTATTTGTGTATTTGTCTTTCACTTGGCGACTGAACTTTCTGCTTCTATGCGCAGTGGATGGCTTCTAATAGCAGAAGTCAAAAGCAGATTTGACCCAAGCAATGGAGGAGCCGATCCCAAAAAGTTCATAAAGGCTGTTTGTGAGCTAGGTTTTGTCTCAGCTTTGAAGGTATATTACTTCTCTGTTGCTAATTATCCTTTTCTCTCTTGCTGCTAATTTACAAGTATCAATCATGTGCAGGACTTCTCAAACAAGATGTTTATCTTGTTATACTTCAAGAAAAAGGTCTGTAAATCCTCACGTTCTGCCTCTCATTTCTACTCCACCACTGGGTTTAATCATCATTTTGCTTTGTGTGTTCTACAGGATGAGAAAATTTCAACAGGGAAAGCGATCGATTGGCCACAGCTAAAACCTTGTTTATACAAACGTCGCTGA

mRNA sequence

ATGGTGGGGGAGGGCCGCTCAAGCAAAAAGCGCAAGAGGGCGATGCGTCGTGGAGCAGACAAAAACCAAGACATCGTTGTTTCTGGTTCTTCCGACGCCCCAAAATCTCAGAGGCTTTCCGGTTCGTCTAGTTTTCTCGATAAGATGCGAGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACCTGCACAGGGGAAGAGGCGCTTAGTTATTTCAAAGAAGACCAGGTTCTGTTTGATGTTTATCATACAGGATACCAAGAGCAAATGTCGCATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTGAAAGAGCACGATCCTTCATTTATGATAGCTGATTTTGGCTGTGGGGATGCACGCCTTGCTAAAAATGTGAAGAATAAAGTTTTCTCGTTTGATCTGGTTTCCAAAGATCCTTCTGTTGTTGCTTGTGATATGTCAAAAACACCTCTGGACTCTTCATCTGTGGATGTTGCTGTGTTTTGTCTTTCACTTATGGGGATCAATTATGAAAGTTACTTGGCAGAAGCACAAAGAGTACTTAAACCACGTGGATGGCTTCTAATAGCAGAAGTCAAAAGCAGATTTGACCCAAGCAATGGAGGAGCCGATCCCAAAAAGTTCATAAAGGCTGTTTGTGAGCTAGGTTTTGTCTCAGCTTTGAAGGACTTCTCAAACAAGATGTTTATCTTGTTATACTTCAAGAAAAAGGATGAGAAAATTTCAACAGGGAAAGCGATCGATTGGCCACAGCTAAAACCTTGTTTATACAAACGTCGCTGA

Coding sequence (CDS)

ATGGTGGGGGAGGGCCGCTCAAGCAAAAAGCGCAAGAGGGCGATGCGTCGTGGAGCAGACAAAAACCAAGACATCGTTGTTTCTGGTTCTTCCGACGCCCCAAAATCTCAGAGGCTTTCCGGTTCGTCTAGTTTTCTCGATAAGATGCGAGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACCTGCACAGGGGAAGAGGCGCTTAGTTATTTCAAAGAAGACCAGGTTCTGTTTGATGTTTATCATACAGGATACCAAGAGCAAATGTCGCATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTGAAAGAGCACGATCCTTCATTTATGATAGCTGATTTTGGCTGTGGGGATGCACGCCTTGCTAAAAATGTGAAGAATAAAGTTTTCTCGTTTGATCTGGTTTCCAAAGATCCTTCTGTTGTTGCTTGTGATATGTCAAAAACACCTCTGGACTCTTCATCTGTGGATGTTGCTGTGTTTTGTCTTTCACTTATGGGGATCAATTATGAAAGTTACTTGGCAGAAGCACAAAGAGTACTTAAACCACGTGGATGGCTTCTAATAGCAGAAGTCAAAAGCAGATTTGACCCAAGCAATGGAGGAGCCGATCCCAAAAAGTTCATAAAGGCTGTTTGTGAGCTAGGTTTTGTCTCAGCTTTGAAGGACTTCTCAAACAAGATGTTTATCTTGTTATACTTCAAGAAAAAGGATGAGAAAATTTCAACAGGGAAAGCGATCGATTGGCCACAGCTAAAACCTTGTTTATACAAACGTCGCTGA

Protein sequence

MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Homology
[Close]
BLAST of Csor.00g121720 vs. ExPASy Swiss-Prot
Match: Q84JC0 (Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g40530 PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.2e-98
Identity = 176/248 (70.97%), Postives = 202/248 (81.45%), Query Frame = 0 

Query: 21  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKED 80
           KNQ     G S AP  +     S+FLD +R RLSGG FRMLNEKLYTC+G+EAL YFKED
Sbjct: 45  KNQQ---HGGSSAPSKR--PKPSNFLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKED 104

Query: 81  QVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSF 140
             +FD+YHTGYQ+QMS+WPELPVN II WL  +  S ++ADFGCGDAR+AK+VKNKVFSF
Sbjct: 105 PQMFDMYHTGYQQQMSNWPELPVNSIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSF 164

Query: 141 DLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEV 200
           DLVSK+PSV+ACDMS T L+SSSVDVAVFCLSLMG NY SY+ EA RVL+P G LLIAEV
Sbjct: 165 DLVSKNPSVIACDMSNTSLESSSVDVAVFCLSLMGTNYSSYIKEAHRVLRPSGMLLIAEV 224

Query: 201 KSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQL 260
           KSRFDP+NGGADPK F+KAVC+LGF S LKDFSNKMFIL +FKKK++  S  K I WP+L
Sbjct: 225 KSRFDPNNGGADPKDFVKAVCDLGFTSVLKDFSNKMFILFHFKKKEQMNSNQKIIKWPEL 284

Query: 261 KPCLYKRR 269
           K CLYKRR
Sbjct: 285 KACLYKRR 287

[Close]
BLAST of Csor.00g121720 vs. ExPASy Swiss-Prot
Match: O43159 (Ribosomal RNA-processing protein 8 OS=Homo sapiens OX=9606 GN=RRP8 PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 5.1e-52
Identity = 107/222 (48.20%), Postives = 138/222 (62.16%), Query Frame = 0 

Query: 48  KMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLII 107
           +M  RL G  FR LNE+LY+     A   F+ED   F +YH G+Q Q+  WP  PV+ I 
Sbjct: 241 RMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIA 300

Query: 108 KWLKEHDPSFMIADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVA 167
           + L++   S ++ADFGCGD RLA +++N V  FDL S DP V  CDM++ PL+  SVDVA
Sbjct: 301 RDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVA 360

Query: 168 VFCLSLMGINYESYLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVS 227
           VFCLSLMG N   +L EA RVLKP G L +AEV SRF+      D + F++AV +LGF  
Sbjct: 361 VFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKI 420

Query: 228 ALKDFSNKMFILLYFKKKDEKISTGKA-IDWPQLKPCLYKRR 269
             KD +N  F L  F+K    +   KA +   QL+PCLYKRR
Sbjct: 421 VSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR 456

[Close]
BLAST of Csor.00g121720 vs. ExPASy Swiss-Prot
Match: Q9DB85 (Ribosomal RNA-processing protein 8 OS=Mus musculus OX=10090 GN=Rrp8 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.1e-50
Identity = 109/237 (45.99%), Postives = 142/237 (59.92%), Query Frame = 0 

Query: 34  PKS-QRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQ 93
           PKS  + S + +   +M  RL G  FR LNE+LY+     A   F+ED   F +YH G+Q
Sbjct: 227 PKSDSQESRAGALRARMTQRLDGARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRGFQ 286

Query: 94  EQMSHWPELPVNLIIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSFDLVSKDPSVVAC 153
            Q+  WP  PV+ I K L++   S ++ADFGCGD RLA +V+N V  FDL S DP V  C
Sbjct: 287 RQVKKWPLHPVDRIAKDLRQKPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVC 346

Query: 154 DMSKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEVKSRFDPSNGGAD 213
           DM++ PL+  SVDVAVFCLSLMG N   +L EA RVLK  G L +AEV SRF+      D
Sbjct: 347 DMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFE------D 406

Query: 214 PKKFIKAVCELGFVSALKDFSNKMFILLYFKKK-DEKISTGKAIDWPQLKPCLYKRR 269
            + F+ AV +LGF    KD +N  F L  F+K    ++     +   +L+PCLYKRR
Sbjct: 407 IRTFLGAVTKLGFKIIYKDLTNSHFFLFDFEKTGPPRVGPKAQLSGLKLQPCLYKRR 457

[Close]
BLAST of Csor.00g121720 vs. ExPASy Swiss-Prot
Match: Q5U4F0 (Ribosomal RNA-processing protein 8 OS=Rattus norvegicus OX=10116 GN=Rrp8 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.2e-49
Identity = 112/271 (41.33%), Postives = 155/271 (57.20%), Query Frame = 0 

Query: 6   RSSKKRKRAMRRGADKNQDIVVSGSSD------APKS-QRLSGSSSFLDKMRARLSGGHF 65
           + +K+R +   R  +    + +  S +      APKS  + + + +   +M  RL G  F
Sbjct: 193 QKNKRRHKNKFRPLETQDQVPLKASIEETEVPPAPKSDSQETRAGALRARMTQRLDGARF 252

Query: 66  RMLNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFM 125
           R LNE+LY+     A   F+ED   F +YH G+Q Q+  WP  PV+ I K L++   S +
Sbjct: 253 RYLNEQLYSGPSSAAQCLFQEDPEAFLLYHRGFQRQVKKWPLHPVDRIAKDLRQKPASLV 312

Query: 126 IADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINY 185
           +ADFGCGD RLA +V+N V  FDL + DP V  CDM++ PL+  SVDVAVFCLSLMG N 
Sbjct: 313 VADFGCGDCRLASSVRNPVHCFDLAALDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNI 372

Query: 186 ESYLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFI 245
             +L EA RVLKP G L +AEV SRF+      D + F+ AV +LGF    KD +N  F 
Sbjct: 373 RDFLEEANRVLKPGGLLKVAEVSSRFE------DIRTFLGAVTKLGFKVIYKDLTNSHFF 432

Query: 246 LLYFKKK-DEKISTGKAIDWPQLKPCLYKRR 269
           L  F+K    ++     +   +L+PCLYK R
Sbjct: 433 LFDFEKTGPPRVGPKAQLSGLKLQPCLYKHR 457

[Close]
BLAST of Csor.00g121720 vs. ExPASy Swiss-Prot
Match: O44410 (Ribosomal RNA-processing protein 8 OS=Caenorhabditis elegans OX=6239 GN=T07A9.8 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.9e-48
Identity = 108/267 (40.45%), Postives = 160/267 (59.93%), Query Frame = 0 

Query: 7   SSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLD---KMRARLSGGHFRMLNE 66
           + KKRKR  ++   K +   V+G +   ++  ++ +    D   + + RL  G FR LNE
Sbjct: 88  TKKKRKRGPKKKKFKPE---VAGKAAETENDDVAAAPEEADPIAEAKKRLDAGRFRFLNE 147

Query: 67  KLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIADFG 126
           KLYTCTG EA  +FKED   FD+YH G+ +Q+  WP  P+  II+WL+       + D G
Sbjct: 148 KLYTCTGSEAFDFFKEDPTAFDLYHKGFADQVKKWPNHPLREIIRWLQSKPDQQSVFDLG 207

Query: 127 CGDARLAKNV--KNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYESY 186
           CG+A++A+ V  K+K+ SFDLV+ +  V +CDMSK P + SS D+ ++CLSLMG N   +
Sbjct: 208 CGEAKIAEAVGEKHKIRSFDLVAVNDRVESCDMSKLPAEDSSADIVIYCLSLMGTNLYDF 267

Query: 187 LAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLY 246
           + EA+RVLK  G L IAEV SRF         K+F +A+ ++GF  + +      F+++ 
Sbjct: 268 IREARRVLKIGGILKIAEVTSRF------VSIKQFCEAITKMGFEQSHRRELTDYFMMME 327

Query: 247 FKKKDEKISTGKAIDWPQLKPCLYKRR 269
           FKK  EK+   +     +LKPCLYK+R
Sbjct: 328 FKKV-EKVEQKRPYGL-KLKPCLYKKR 343

[Close]
BLAST of Csor.00g121720 vs. NCBI nr
Match: KAG6602415.1 (Ribosomal RNA-processing protein 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541 bits (1393), Expect = 5.43e-194
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60
           MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM
Sbjct: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60

Query: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA 120
           LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA
Sbjct: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA 120

Query: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180
           DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES
Sbjct: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180

Query: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240
           YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL
Sbjct: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240

Query: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           YFKKKDEKISTGKAIDWPQLKPCLYKRR
Sbjct: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268

[Close]
BLAST of Csor.00g121720 vs. NCBI nr
Match: XP_022991034.1 (ribosomal RNA-processing protein 8-like [Cucurbita maxima])

HSP 1 Score: 534 bits (1375), Expect = 3.02e-191
Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60
           MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLSGSSSFLDKMRARLSGGHFRM
Sbjct: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDATKSQRLSGSSSFLDKMRARLSGGHFRM 60

Query: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA 120
           LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFM+A
Sbjct: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMVA 120

Query: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180
           DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS TPLDSSSVDVAVFCLSLMGINYES
Sbjct: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSNTPLDSSSVDVAVFCLSLMGINYES 180

Query: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240
           YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADP+KFIKAVCELGFVSALKDFSNKMFILL
Sbjct: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPEKFIKAVCELGFVSALKDFSNKMFILL 240

Query: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           YFKKKDEKISTGKAIDWPQLKPCLYKRR
Sbjct: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268

[Close]
BLAST of Csor.00g121720 vs. NCBI nr
Match: XP_023553583.1 (ribosomal RNA-processing protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530 bits (1366), Expect = 7.10e-190
Identity = 263/268 (98.13%), Postives = 265/268 (98.88%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60
           MVGEGRSSKKRKRAMRRGADK+QDIVVSGSSDA KSQRLSGSSSFLDKMRARLSGGHFRM
Sbjct: 1   MVGEGRSSKKRKRAMRRGADKSQDIVVSGSSDATKSQRLSGSSSFLDKMRARLSGGHFRM 60

Query: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA 120
           LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFM+A
Sbjct: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMVA 120

Query: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180
           DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS TPLDSSSVDVAVFCLSLMGINYES
Sbjct: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSNTPLDSSSVDVAVFCLSLMGINYES 180

Query: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240
           YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL
Sbjct: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240

Query: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           YFKKKDEKIST KAIDWPQLKPCLYKRR
Sbjct: 241 YFKKKDEKISTEKAIDWPQLKPCLYKRR 268

[Close]
BLAST of Csor.00g121720 vs. NCBI nr
Match: XP_022923770.1 (ribosomal RNA-processing protein 8-like [Cucurbita moschata])

HSP 1 Score: 530 bits (1366), Expect = 7.10e-190
Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60
           MV EGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLS SSSFLDKMRARLSGGHFRM
Sbjct: 1   MVEEGRSSKKRKRAMRRGADKNQDIVVSGSSDATKSQRLSISSSFLDKMRARLSGGHFRM 60

Query: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA 120
           LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFM+A
Sbjct: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMVA 120

Query: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180
           DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES
Sbjct: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180

Query: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240
           YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL
Sbjct: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240

Query: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           YFKKKDEKISTGKAIDWPQLKPCLYKRR
Sbjct: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268

[Close]
BLAST of Csor.00g121720 vs. NCBI nr
Match: KAG7033091.1 (Ribosomal RNA-processing protein 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507 bits (1306), Expect = 3.10e-180
Identity = 262/299 (87.63%), Postives = 264/299 (88.29%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60
           MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM
Sbjct: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60

Query: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTG--------YQEQMSHWPELPVNLIIKWLKE 120
           LNEKLYTCTGEEALSYFKEDQVLFDV  +         YQEQMSHWPELPVNLIIKWLKE
Sbjct: 61  LNEKLYTCTGEEALSYFKEDQVLFDVVSSARLFLLPKRYQEQMSHWPELPVNLIIKWLKE 120

Query: 121 HDPSFMIADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSK---------------- 180
           HDPSFM+ADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSK                
Sbjct: 121 HDPSFMVADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKVRTLFELIVIRCIETY 180

Query: 181 -------TPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEVKSRFDPSNG 240
                  TPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKP GWLLIAEVKSRFDPSNG
Sbjct: 181 NCISCMKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPSGWLLIAEVKSRFDPSNG 240

Query: 241 GADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           GADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR
Sbjct: 241 GADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR 299

[Close]
BLAST of Csor.00g121720 vs. ExPASy TrEMBL
Match: A0A6J1JTN8 (Ribosomal RNA-processing protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111487746 PE=3 SV=1)

HSP 1 Score: 534 bits (1375), Expect = 1.46e-191
Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60
           MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLSGSSSFLDKMRARLSGGHFRM
Sbjct: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDATKSQRLSGSSSFLDKMRARLSGGHFRM 60

Query: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA 120
           LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFM+A
Sbjct: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMVA 120

Query: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180
           DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMS TPLDSSSVDVAVFCLSLMGINYES
Sbjct: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSNTPLDSSSVDVAVFCLSLMGINYES 180

Query: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240
           YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADP+KFIKAVCELGFVSALKDFSNKMFILL
Sbjct: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPEKFIKAVCELGFVSALKDFSNKMFILL 240

Query: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           YFKKKDEKISTGKAIDWPQLKPCLYKRR
Sbjct: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268

[Close]
BLAST of Csor.00g121720 vs. ExPASy TrEMBL
Match: A0A6J1ECU8 (Ribosomal RNA-processing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111431375 PE=3 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 3.44e-190
Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRM 60
           MV EGRSSKKRKRAMRRGADKNQDIVVSGSSDA KSQRLS SSSFLDKMRARLSGGHFRM
Sbjct: 1   MVEEGRSSKKRKRAMRRGADKNQDIVVSGSSDATKSQRLSISSSFLDKMRARLSGGHFRM 60

Query: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIA 120
           LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFM+A
Sbjct: 61  LNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMVA 120

Query: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180
           DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES
Sbjct: 121 DFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYES 180

Query: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240
           YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL
Sbjct: 181 YLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILL 240

Query: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           YFKKKDEKISTGKAIDWPQLKPCLYKRR
Sbjct: 241 YFKKKDEKISTGKAIDWPQLKPCLYKRR 268

[Close]
BLAST of Csor.00g121720 vs. ExPASy TrEMBL
Match: A0A5A7T472 (Ribosomal RNA-processing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00030 PE=3 SV=1)

HSP 1 Score: 487 bits (1254), Expect = 7.02e-173
Identity = 240/283 (84.81%), Postives = 256/283 (90.46%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKN---------------QDIVVSGSSDAPKSQRLSGSSSF 60
           M  EGRSSKKRKRA RRG DKN               QDIVVS SSD  K+QR+SGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEAL+YFKED++LFD+YHTGYQEQM+HWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVD 180
           IIKWLKEHDPSF++ADFGCGDARL+KNVKNKVFSFDLVSKDPSV+ACDMS TPLDS+SVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGF 240
           VAVFCLSLMG+NY SYLAEA+RVLKPRGWLLI+EVKSRFDPSNGGADP+KFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           VSALKDFSNKMFILLYFKKKDEK S GK IDWPQLKPCLYKRR
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKTSEGKDIDWPQLKPCLYKRR 283

[Close]
BLAST of Csor.00g121720 vs. ExPASy TrEMBL
Match: A0A1S3C8U7 (Ribosomal RNA-processing protein 8 OS=Cucumis melo OX=3656 GN=LOC103498109 PE=3 SV=1)

HSP 1 Score: 487 bits (1254), Expect = 7.02e-173
Identity = 240/283 (84.81%), Postives = 256/283 (90.46%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKN---------------QDIVVSGSSDAPKSQRLSGSSSF 60
           M  EGRSSKKRKRA RRG DKN               QDIVVS SSD  K+QR+SGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEAL+YFKED++LFD+YHTGYQEQM+HWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSVD 180
           IIKWLKEHDPSF++ADFGCGDARL+KNVKNKVFSFDLVSKDPSV+ACDMS TPLDS+SVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELGF 240
           VAVFCLSLMG+NY SYLAEA+RVLKPRGWLLI+EVKSRFDPSNGGADP+KFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           VSALKDFSNKMFILLYFKKKDEK S GK IDWPQLKPCLYKRR
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKTSEGKDIDWPQLKPCLYKRR 283

[Close]
BLAST of Csor.00g121720 vs. ExPASy TrEMBL
Match: A0A6J1C2A0 (Ribosomal RNA-processing protein 8 OS=Momordica charantia OX=3673 GN=LOC111006762 PE=3 SV=1)

HSP 1 Score: 487 bits (1254), Expect = 7.28e-173
Identity = 241/284 (84.86%), Postives = 255/284 (89.79%), Query Frame = 0 

Query: 1   MVGEGRSSKKRKRAMRRGADKNQD----------------IVVSGSSDAPKSQRLSGSSS 60
           M  EGRSS+KRKRA RRG DKN+D                IVVSGSS   K QR+SGSSS
Sbjct: 1   MADEGRSSRKRKRAKRRGEDKNKDFTNNIADTARPSSRKDIVVSGSSGGKKFQRVSGSSS 60

Query: 61  FLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKEDQVLFDVYHTGYQEQMSHWPELPVN 120
           FLDKMRARLSGGHFRM+NEKLYTCTGEEAL+YFKEDQVLFDVYHTGYQEQMSHWPE PVN
Sbjct: 61  FLDKMRARLSGGHFRMINEKLYTCTGEEALNYFKEDQVLFDVYHTGYQEQMSHWPEQPVN 120

Query: 121 LIIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSFDLVSKDPSVVACDMSKTPLDSSSV 180
           LIIKWLKEHDPSF++ADFGCGDARLAKNVKNKVFSFDLVSKDPSV+ACDMS TPLDSSSV
Sbjct: 121 LIIKWLKEHDPSFIVADFGCGDARLAKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSV 180

Query: 181 DVAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEVKSRFDPSNGGADPKKFIKAVCELG 240
           DVAVFCLSLMG+NYESYLAEA+RVLKPRGWLLI+EVKSRFDPSNGGADPKKFIKAVC+LG
Sbjct: 181 DVAVFCLSLMGVNYESYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCDLG 240

Query: 241 FVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQLKPCLYKRR 268
           FVSALKDFSNKMFILLYFKKKDEKI  GK +DWP+LKPCLYKRR
Sbjct: 241 FVSALKDFSNKMFILLYFKKKDEKILKGKDVDWPELKPCLYKRR 284

[Close]
BLAST of Csor.00g121720 vs. TAIR 10
Match: AT5G40530.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 360.9 bits (925), Expect = 8.7e-100
Identity = 176/248 (70.97%), Postives = 202/248 (81.45%), Query Frame = 0 

Query: 21  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKED 80
           KNQ     G S AP  +     S+FLD +R RLSGG FRMLNEKLYTC+G+EAL YFKED
Sbjct: 45  KNQQ---HGGSSAPSKR--PKPSNFLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKED 104

Query: 81  QVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSF 140
             +FD+YHTGYQ+QMS+WPELPVN II WL  +  S ++ADFGCGDAR+AK+VKNKVFSF
Sbjct: 105 PQMFDMYHTGYQQQMSNWPELPVNSIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSF 164

Query: 141 DLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEV 200
           DLVSK+PSV+ACDMS T L+SSSVDVAVFCLSLMG NY SY+ EA RVL+P G LLIAEV
Sbjct: 165 DLVSKNPSVIACDMSNTSLESSSVDVAVFCLSLMGTNYSSYIKEAHRVLRPSGMLLIAEV 224

Query: 201 KSRFDPSNGGADPKKFIKAVCELGFVSALKDFSNKMFILLYFKKKDEKISTGKAIDWPQL 260
           KSRFDP+NGGADPK F+KAVC+LGF S LKDFSNKMFIL +FKKK++  S  K I WP+L
Sbjct: 225 KSRFDPNNGGADPKDFVKAVCDLGFTSVLKDFSNKMFILFHFKKKEQMNSNQKIIKWPEL 284

Query: 261 KPCLYKRR 269
           K CLYKRR
Sbjct: 285 KACLYKRR 287

[Close]
BLAST of Csor.00g121720 vs. TAIR 10
Match: AT5G40530.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 318.9 bits (816), Expect = 3.8e-87
Identity = 163/248 (65.73%), Postives = 186/248 (75.00%), Query Frame = 0 

Query: 21  KNQDIVVSGSSDAPKSQRLSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALSYFKED 80
           KNQ     G S AP  +     S+FLD +R RLSGG FRMLNEKLYTC+G+EAL YFKED
Sbjct: 45  KNQQ---HGGSSAPSKR--PKPSNFLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKED 104

Query: 81  QVLFDVYHTGYQEQMSHWPELPVNLIIKWLKEHDPSFMIADFGCGDARLAKNVKNKVFSF 140
             +FD+YHTGYQ+QMS+WPELPVN II WL  +  S ++ADFGCGDAR+AK+VKNKVFSF
Sbjct: 105 PQMFDMYHTGYQQQMSNWPELPVNSIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSF 164

Query: 141 DLVSKDPSVVACDMSKTPLDSSSVDVAVFCLSLMGINYESYLAEAQRVLKPRGWLLIAEV 200
           DLVSK+PSV+ACDMS T L+SSSVDVAVFCLSLMG NY SY+ EA RVL+P G LLIAEV
Sbjct: 165 DLVSKNPSVIACDMSNTSLESSSVDVAVFCLSLMGTNYSSYIKEAHRVLRPSGMLLIAEV 224

Query: 201 KSRFDPSNGGADPKKFIKAVCELGFVSALK-----------------------DFSNKMF 246
           KSRFDP+NGGADPK F+KAVC+LGF S LK                       DFSNKMF
Sbjct: 225 KSRFDPNNGGADPKDFVKAVCDLGFTSVLKVQSFLLLFFISTIRKKLIWFFEQDFSNKMF 284

The following BLAST results are available for this feature:
BLAST of Csor.00g121720 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84JC01.2e-9870.97Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g40530 ... [more]
O431595.1e-5248.20Ribosomal RNA-processing protein 8 OS=Homo sapiens OX=9606 GN=RRP8 PE=1 SV=2[more]
Q9DB858.1e-5045.99Ribosomal RNA-processing protein 8 OS=Mus musculus OX=10090 GN=Rrp8 PE=1 SV=1[more]
Q5U4F05.2e-4941.33Ribosomal RNA-processing protein 8 OS=Rattus norvegicus OX=10116 GN=Rrp8 PE=1 SV... [more]
O444109.9e-4840.45Ribosomal RNA-processing protein 8 OS=Caenorhabditis elegans OX=6239 GN=T07A9.8 ... [more]
BLAST of Csor.00g121720 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602415.15.43e-194100.00Ribosomal RNA-processing protein 8, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_022991034.13.02e-19198.51ribosomal RNA-processing protein 8-like [Cucurbita maxima][more]
XP_023553583.17.10e-19098.13ribosomal RNA-processing protein 8-like [Cucurbita pepo subsp. pepo][more]
XP_022923770.17.10e-19098.51ribosomal RNA-processing protein 8-like [Cucurbita moschata][more]
KAG7033091.13.10e-18087.63Ribosomal RNA-processing protein 8 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Csor.00g121720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JTN81.46e-19198.51Ribosomal RNA-processing protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111487746 P... [more]
A0A6J1ECU83.44e-19098.51Ribosomal RNA-processing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111431375... [more]
A0A5A7T4727.02e-17384.81Ribosomal RNA-processing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C8U77.02e-17384.81Ribosomal RNA-processing protein 8 OS=Cucumis melo OX=3656 GN=LOC103498109 PE=3 ... [more]
A0A6J1C2A07.28e-17384.86Ribosomal RNA-processing protein 8 OS=Momordica charantia OX=3673 GN=LOC11100676... [more]
BLAST of Csor.00g121720 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G40530.18.7e-10070.97S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
AT5G40530.23.8e-8765.73S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007823Ribosomal RNA processing protein 8PFAMPF05148Methyltransf_8coord: 47..268
e-value: 3.6E-77
score: 259.1
IPR007823Ribosomal RNA processing protein 8PANTHERPTHR12787UNCHARACTERIZEDcoord: 20..268
IPR042036Ribosomal RNA-processing protein 8, N-terminal domainGENE3D1.10.10.2150coord: 49..99
e-value: 1.8E-25
score: 90.8
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 101..268
e-value: 8.4E-56
score: 190.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 119..197
e-value: 0.00105335
score: 35.8687
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 84..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g121720.m01Csor.00g121720.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0006364 rRNA processing
cellular_component GO:0005730 nucleolus
molecular_function GO:0008168 methyltransferase activity