Csor.00g120870 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGTACACAAACAAATTTCCCATGTTTTTCTTCTATGTTCACTCCCTTGATTCTCATAGTTCTTCATTTTGTCTTCAGGGTTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATCGCAAAAGGTAAGCTTTTTGGAAGCCTAGAAATGGAGTTTTTGGAAGATATTGGTGTAATTAACGAAGGGGTTTGTTTGTGTTGGCAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTTCCCCTCCTCTGCCGCCCTCTTCATGA ATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGGTTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATCGCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTTCCCCTCCTCTGCCGCCCTCTTCATGA ATGGATCATCCTAAAATCTTCCCAATTCTTCTCCTTCTCTTCATCATTCTTGGGTTTGGCGTGGGAGCGATGGAAGCAGCGGCACATCCCGGCTATGATACCAGTTCATCGCAAAAGAAGAGTGGGGGCAAGCCCAGGAAAGTGATGATGGAAGTGATGGACTATGCAGATCCAGGCCCAAATACCAATACAAGAAGTGGCTATCTCACCCCCCCTTCTTCCCCTCCTCTGCCGCCCTCTTCATGA MDHPKIFPILLLLFIILGFGVGAMEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDYADPGPNTNTRSGYLTPPSSPPLPPSS Homology
BLAST of Csor.00g120870 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165 bits (417), Expect = 2.80e-51 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Csor.00g120870 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 144 bits (363), Expect = 4.60e-43 Identity = 73/78 (93.59%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of Csor.00g120870 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137 bits (346), Expect = 1.75e-40 Identity = 72/78 (92.31%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Csor.00g120870 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus]) HSP 1 Score: 77.4 bits (189), Expect = 1.85e-16 Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of Csor.00g120870 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 3.68e-11 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Csor.00g120870 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 8.98e-17 Identity = 45/82 (54.88%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of Csor.00g120870 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.78e-11 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Csor.00g120870 vs. ExPASy TrEMBL
Match: A0A7J7NY32 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_007365 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.64e-09 Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Csor.00g120870 vs. ExPASy TrEMBL
Match: A0A540K4V3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_045201 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.03e-07 Identity = 35/68 (51.47%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Csor.00g120870 vs. ExPASy TrEMBL
Match: A0A444ZPX5 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B04g073244 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.72e-07 Identity = 38/80 (47.50%), Postives = 46/80 (57.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|