Csor.00g120850 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g120850
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionearly nodulin-75-like
LocationCsor_Chr04: 19974556 .. 19975388 (-)
RNA-Seq ExpressionCsor.00g120850
SyntenyCsor.00g120850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAACCATGGAGTATTCTCTGTTCTTCTCCTTTCATGCTTCGTGTTTTCATCGGGTAAGCTTTTAATTCTTAGGATTCTTTATTTACATACACATATCTGGTTAAATATTGAGTTTTGATCCGTTTGTTTTTCTAAGGATTTGGAGTTGAAGCAGTGATGGGAGCTGCGAACGAGGTCTTTGTTACTTCAACCAAGGTACTCCCAAATTTTTGTATATCCATGCAATGTTTGGTATAGACGTGCTTTGCGTTACTTATTATCTAAACCAATTTAGAACAAACTTAGCTAAAAGCACTTGAAATCAACCATTTTTGTTTGTTCAAACTAAACACTACCATTTTTGTTTTTATAGAAATTTTTTTGGTCATACGTAGGAACATACTAATGTATATTTATATTGGAGCTAAAATGAACTTTTGTGTGTTTGTTTGGTAGGGAAAGGAAGTATATTCGAGGAAGATGAAGATGGAAGCATTTAATTCTTTTGTTACTCCACTAAAAGTTCCATCTGTCGACTCTGTTGTTCCTCCTGTTCCTCCTCCCAAAGTTCTACCGGTTGACTCTGTTGTTTCTCCATCCAAAGTACCATTTGTTGACCATGTTGCTCCTCCATCCAAAGTACCATCTGTCAACCATGTTGTTCCTCCGCTCAAAGTTCTATCTGTCAACTCTGTAGTTTCTCCATCTAGAGTATCATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCGGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCTACCCAGAGTATAA

mRNA sequence

ATGGTTAACCATGGAGTATTCTCTGTTCTTCTCCTTTCATGCTTCGTGTTTTCATCGGGATTTGGAGTTGAAGCAGTGATGGGAGCTGCGAACGAGGTCTTTGTTACTTCAACCAAGGGAAAGGAAGTATATTCGAGGAAGATGAAGATGGAAGCATTTAATTCTTTTGTTACTCCACTAAAAGTTCCATCTGTCGACTCTGTTGTTCCTCCTGTTCCTCCTCCCAAAGTTCTACCGGTTGACTCTGTTGTTTCTCCATCCAAAGTACCATTTGTTGACCATGTTGCTCCTCCATCCAAAGTACCATCTGTCAACCATGTTGTTCCTCCGCTCAAAGTTCTATCTGTCAACTCTGTAGTTTCTCCATCTAGAGTATCATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCGGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCTACCCAGAGTATAA

Coding sequence (CDS)

ATGGTTAACCATGGAGTATTCTCTGTTCTTCTCCTTTCATGCTTCGTGTTTTCATCGGGATTTGGAGTTGAAGCAGTGATGGGAGCTGCGAACGAGGTCTTTGTTACTTCAACCAAGGGAAAGGAAGTATATTCGAGGAAGATGAAGATGGAAGCATTTAATTCTTTTGTTACTCCACTAAAAGTTCCATCTGTCGACTCTGTTGTTCCTCCTGTTCCTCCTCCCAAAGTTCTACCGGTTGACTCTGTTGTTTCTCCATCCAAAGTACCATTTGTTGACCATGTTGCTCCTCCATCCAAAGTACCATCTGTCAACCATGTTGTTCCTCCGCTCAAAGTTCTATCTGTCAACTCTGTAGTTTCTCCATCTAGAGTATCATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCCACCCGGAGTACAATCTGTCAACTCTGTGCCTCCACCCAGAGTACAATCTGTCAACTCTGTGCCTCTACCCAGAGTATAA

Protein sequence

MVNHGVFSVLLLSCFVFSSGFGVEAVMGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPLKVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVVSPSRVSSVNSVPPPRVQSVNSVPPPGVQSVNSVPPPRVQSVNSVPLPRV
Homology
BLAST of Csor.00g120850 vs. NCBI nr
Match: KAG6602502.1 (hypothetical protein SDJN03_07735, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310 bits (793), Expect = 8.33e-106
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0

Query: 1   MVNHGVFSVLLLSCFVFSSGFGVEAVMGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPL 60
           MVNHGVFSVLLLSCFVFSSGFGVEAVMGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPL
Sbjct: 1   MVNHGVFSVLLLSCFVFSSGFGVEAVMGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPL 60

Query: 61  KVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVV 120
           KVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVV
Sbjct: 61  KVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVV 120

Query: 121 SPSRVSSVNSVPPPRVQSVNSVPPPGVQSVNSVPPPRVQSVNSVPLPRV 169
           SPSRVSSVNSVPPPRVQSVNSVPPPGVQSVNSVPPPRVQSVNSVPLPRV
Sbjct: 121 SPSRVSSVNSVPPPRVQSVNSVPPPGVQSVNSVPPPRVQSVNSVPLPRV 169

BLAST of Csor.00g120850 vs. NCBI nr
Match: XP_022955175.1 (early nodulin-75-like [Cucurbita moschata])

HSP 1 Score: 247 bits (630), Expect = 1.63e-80
Identity = 148/200 (74.00%), Postives = 157/200 (78.50%), Query Frame = 0

Query: 1   MVNHGVFSVLLLSCFVFSSGFGVEAVMGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPL 60
           M N+GVFSVLLLSCFVFSSGFGVEAV+GAA+EVFVTSTKGKEVYSRKM+MEAFNSFVTPL
Sbjct: 1   MGNYGVFSVLLLSCFVFSSGFGVEAVIGAADEVFVTSTKGKEVYSRKMRMEAFNSFVTPL 60

Query: 61  KVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHV------------- 120
           KVPSVDSVVPPVPPPKVLPVD VVSPSKVP ++HVAPPS+V SVN V             
Sbjct: 61  KVPSVDSVVPPVPPPKVLPVDFVVSPSKVPSINHVAPPSRVSSVNSVPPPRVQSVNSIPP 120

Query: 121 --------VPPLKVLSVNSV----------VSPSRVSSVNSVPPPRVQSVNSVPPPGVQS 169
                   VPPL+V SVNSV          + P R  SVNSVPPPRVQSVNSVPPP VQS
Sbjct: 121 LGKQSVNSVPPLRVQSVNSVPPPRVQSVNSIPPHREQSVNSVPPPRVQSVNSVPPPRVQS 180

BLAST of Csor.00g120850 vs. NCBI nr
Match: XP_023527229.1 (uncharacterized protein LOC111790526 [Cucurbita pepo subsp. pepo] >XP_023527237.1 uncharacterized protein LOC111790526 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184 bits (466), Expect = 1.17e-56
Identity = 111/147 (75.51%), Postives = 114/147 (77.55%), Query Frame = 0

Query: 1   MVNHGVFSVLLLSCFVFSSGFGVEAVMGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPL 60
           M NHGVFSVL+LS FVFS GFGVE VMGAA EVFVTS KGKEVYSRKMKME FNSFVT L
Sbjct: 1   MGNHGVFSVLILSYFVFSLGFGVEVVMGAAYEVFVTSIKGKEVYSRKMKMEVFNSFVTSL 60

Query: 61  KVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVV 120
           KVPSV+SVVPPVPPPKVLPVDSVV            PPSKVPS+NHVVPPLKVLSVNSV 
Sbjct: 61  KVPSVNSVVPPVPPPKVLPVDSVV------------PPSKVPSINHVVPPLKVLSVNSV- 120

Query: 121 SPSRVSSVNSVPPPRVQSVNSVPPPGV 147
                      PPPRVQSVNSVPPP V
Sbjct: 121 -----------PPPRVQSVNSVPPPRV 123

BLAST of Csor.00g120850 vs. NCBI nr
Match: XP_022989830.1 (neural Wiskott-Aldrich syndrome protein-like [Cucurbita maxima])

HSP 1 Score: 148 bits (373), Expect = 4.97e-42
Identity = 89/122 (72.95%), Postives = 95/122 (77.87%), Query Frame = 0

Query: 48  MKMEAFNSFVTPLKVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHV 107
           MKMEAFNSFV P      DSV+PPVPPPKVLPVDSVV PSKVP V+ V PP KVPSVN V
Sbjct: 1   MKMEAFNSFVIPF-----DSVIPPVPPPKVLPVDSVVPPSKVPSVNSVVPPPKVPSVNSV 60

Query: 108 VPPLKVLSVNSVVSPSRVSSVNSVPPPRVQSVNSVPPPGVQSVNSVPPPRVQSVNSVPLP 167
           VPP KV SVNS+  P    SVNS+PPP  QSVNS+PPPG QSVNS+PPP  QSVNSVP P
Sbjct: 61  VPPPKVPSVNSIPPPGE-QSVNSIPPPGEQSVNSIPPPGEQSVNSIPPPGEQSVNSVPPP 116

Query: 168 RV 169
           RV
Sbjct: 121 RV 116

BLAST of Csor.00g120850 vs. NCBI nr
Match: XP_022955163.1 (protein diaphanous homolog 1-like [Cucurbita moschata])

HSP 1 Score: 133 bits (334), Expect = 1.06e-35
Identity = 98/156 (62.82%), Postives = 108/156 (69.23%), Query Frame = 0

Query: 27  MGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPLKVPSVDSVVPP---------VPPPKV 86
           MG   EV VTS KG E YSRKMKMEA N FVTP KVPSVD VVPP         VPPPKV
Sbjct: 1   MGVTEEV-VTSVKGNEAYSRKMKMEALNFFVTPPKVPSVDFVVPPPKVSSGNSVVPPPKV 60

Query: 87  LPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVVSPSRVSSVNSV-PPPRV 146
              +SVV P KV  V+ V PP KVPSV+ VVPP KV S +SVV P +V S NSV PPP+V
Sbjct: 61  SSGNSVVPPPKVSSVNSVVPPPKVPSVDSVVPPPKVSSGDSVVPPPKVPSFNSVVPPPKV 120

Query: 147 QSVNSV-PPPGVQSVNS-VPPPRVQSVNSV-PLPRV 169
            SV+ V PPP V SVNS VPPP+V SV+SV P P+V
Sbjct: 121 PSVDFVVPPPKVPSVNSIVPPPKVSSVDSVVPPPKV 155

BLAST of Csor.00g120850 vs. ExPASy TrEMBL
Match: A0A6J1GUF7 (early nodulin-75-like OS=Cucurbita moschata OX=3662 GN=LOC111457216 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 7.89e-81
Identity = 148/200 (74.00%), Postives = 157/200 (78.50%), Query Frame = 0

Query: 1   MVNHGVFSVLLLSCFVFSSGFGVEAVMGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPL 60
           M N+GVFSVLLLSCFVFSSGFGVEAV+GAA+EVFVTSTKGKEVYSRKM+MEAFNSFVTPL
Sbjct: 1   MGNYGVFSVLLLSCFVFSSGFGVEAVIGAADEVFVTSTKGKEVYSRKMRMEAFNSFVTPL 60

Query: 61  KVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHV------------- 120
           KVPSVDSVVPPVPPPKVLPVD VVSPSKVP ++HVAPPS+V SVN V             
Sbjct: 61  KVPSVDSVVPPVPPPKVLPVDFVVSPSKVPSINHVAPPSRVSSVNSVPPPRVQSVNSIPP 120

Query: 121 --------VPPLKVLSVNSV----------VSPSRVSSVNSVPPPRVQSVNSVPPPGVQS 169
                   VPPL+V SVNSV          + P R  SVNSVPPPRVQSVNSVPPP VQS
Sbjct: 121 LGKQSVNSVPPLRVQSVNSVPPPRVQSVNSIPPHREQSVNSVPPPRVQSVNSVPPPRVQS 180

BLAST of Csor.00g120850 vs. ExPASy TrEMBL
Match: A0A6J1JNG2 (neural Wiskott-Aldrich syndrome protein-like OS=Cucurbita maxima OX=3661 GN=LOC111486900 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 2.41e-42
Identity = 89/122 (72.95%), Postives = 95/122 (77.87%), Query Frame = 0

Query: 48  MKMEAFNSFVTPLKVPSVDSVVPPVPPPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHV 107
           MKMEAFNSFV P      DSV+PPVPPPKVLPVDSVV PSKVP V+ V PP KVPSVN V
Sbjct: 1   MKMEAFNSFVIPF-----DSVIPPVPPPKVLPVDSVVPPSKVPSVNSVVPPPKVPSVNSV 60

Query: 108 VPPLKVLSVNSVVSPSRVSSVNSVPPPRVQSVNSVPPPGVQSVNSVPPPRVQSVNSVPLP 167
           VPP KV SVNS+  P    SVNS+PPP  QSVNS+PPPG QSVNS+PPP  QSVNSVP P
Sbjct: 61  VPPPKVPSVNSIPPPGE-QSVNSIPPPGEQSVNSIPPPGEQSVNSIPPPGEQSVNSVPPP 116

Query: 168 RV 169
           RV
Sbjct: 121 RV 116

BLAST of Csor.00g120850 vs. ExPASy TrEMBL
Match: A0A6J1GT66 (protein diaphanous homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457209 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 5.13e-36
Identity = 98/156 (62.82%), Postives = 108/156 (69.23%), Query Frame = 0

Query: 27  MGAANEVFVTSTKGKEVYSRKMKMEAFNSFVTPLKVPSVDSVVPP---------VPPPKV 86
           MG   EV VTS KG E YSRKMKMEA N FVTP KVPSVD VVPP         VPPPKV
Sbjct: 1   MGVTEEV-VTSVKGNEAYSRKMKMEALNFFVTPPKVPSVDFVVPPPKVSSGNSVVPPPKV 60

Query: 87  LPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVVSPSRVSSVNSV-PPPRV 146
              +SVV P KV  V+ V PP KVPSV+ VVPP KV S +SVV P +V S NSV PPP+V
Sbjct: 61  SSGNSVVPPPKVSSVNSVVPPPKVPSVDSVVPPPKVSSGDSVVPPPKVPSFNSVVPPPKV 120

Query: 147 QSVNSV-PPPGVQSVNS-VPPPRVQSVNSV-PLPRV 169
            SV+ V PPP V SVNS VPPP+V SV+SV P P+V
Sbjct: 121 PSVDFVVPPPKVPSVNSIVPPPKVSSVDSVVPPPKV 155

BLAST of Csor.00g120850 vs. ExPASy TrEMBL
Match: A0A4Y7INU3 (Protein kinase domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_018208 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.10e-05
Identity = 37/94 (39.36%), Postives = 46/94 (48.94%), Query Frame = 0

Query: 74  PPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVVSPSRVSSVNSVPP 133
           PP +LP+ +  SP  VP  +   P + +P  N   PP   L +     P  +SS NS PP
Sbjct: 140 PPSMLPIQNSASPPMVPIQNSPTPTTSLPVQNS--PPPLTLPIQDSAPPPMLSSQNSAPP 199

Query: 134 PRVQSVNSVPPPGVQSVNSVPPPRVQSVNSVPLP 167
           P     NS PPP     NS PPP + S NS P P
Sbjct: 200 PMFPIQNSAPPPMFPIQNSAPPPMLSSENSAPPP 231

BLAST of Csor.00g120850 vs. ExPASy TrEMBL
Match: A0A4Z1EDN1 (Uncharacterized protein OS=Botrytis tulipae OX=87230 GN=BTUL_0194g00130 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 9.77e-04
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0

Query: 74  PPKVLPVDSVVSPSKVPFVDHVAPPSKVPSVNHVVPPLKVLSVNSVVSPSRVSSVNSVPP 133
           PP ++P  +VV P +     +V PP  +P+ N V PPL  +   +VV P  +S+ N VPP
Sbjct: 279 PPPLIPTTNVVPPPQT--TTNVVPPPLIPTTNVVPPPL--IPTTNVVPPPLISTTNVVPP 338

Query: 134 PRVQSVNSVPPPGVQSVNSVPPPRV-----QSVNSVPLP 167
           P+  + N VPPP + + N VPPP V     Q  N +P P
Sbjct: 339 PQT-ATNVVPPPLIPTTNVVPPPVVTNTGTQQGNVIPPP 372

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6602502.18.33e-106100.00hypothetical protein SDJN03_07735, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022955175.11.63e-8074.00early nodulin-75-like [Cucurbita moschata][more]
XP_023527229.11.17e-5675.51uncharacterized protein LOC111790526 [Cucurbita pepo subsp. pepo] >XP_023527237.... [more]
XP_022989830.14.97e-4272.95neural Wiskott-Aldrich syndrome protein-like [Cucurbita maxima][more]
XP_022955163.11.06e-3562.82protein diaphanous homolog 1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1GUF77.89e-8174.00early nodulin-75-like OS=Cucurbita moschata OX=3662 GN=LOC111457216 PE=4 SV=1[more]
A0A6J1JNG22.41e-4272.95neural Wiskott-Aldrich syndrome protein-like OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1GT665.13e-3662.82protein diaphanous homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457209 ... [more]
A0A4Y7INU37.10e-0539.36Protein kinase domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_... [more]
A0A4Z1EDN19.77e-0439.39Uncharacterized protein OS=Botrytis tulipae OX=87230 GN=BTUL_0194g00130 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g120850.m01Csor.00g120850.m01mRNA