Csor.00g120200 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g120200
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	thylakoid membrane protein slr0575
Location	Csor_Chr04: 20349786 .. 20353634 (+)
RNA-Seq Expression	Csor.00g120200
Synteny	Csor.00g120200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGAATATCGCCTCCTGCTGCTCTCTGTTCTCATGACAAATTCACTCTCCCCAATCGCCTCTCCCTTGTTTCTCTGCGTTTCTCTCGTCCCTACTGCGCAACCTCTCTGCCAGGCGGCGGCAACCGGAACGGTAGAGCCAACTTTTTCGTCCATTTCGAACCGAGAGCTCCTCTACAGAAGCCTCAACGTTTAGCTTTCACATTCTCGGCTAGGGCTGCTGATACTACTCAGCCGTCTTCTGTTTCAGCCTCGCCGGATAAAGCAGTAGTTACCGATGATGAATTCTCGCTTGCGAAAGTATTTTTCTGATTCTCTATGGCTATGAATTTTTGAATCTTGAGAGTAATTGTGTCGGATATCTCTGGTAGCAGTTGGTTTGGAATTTCTCAATTCTGTTTAATGCGCTGATAATGGTTGTGAAGAAACGAGAGGAGATGTTTGAGAGAAAAGTAGTGTTTAAATTGTACAAGAGACAAGTTTTATCGTCGTAATTTTCTCTGCTTTAAGCTTTTTTTTAGTATGTGGAGCTCTTGGTTATTCTCGAGAATTATCTATGCGCTAGAGGGAGGGAAAAGGAAAGGAAAGAAAGTTCTCTCCAATTTTAGTCGATGAAATATATATGTTGTAGAGATTTGGATCTAATATATCATGCTATGTTAAATTACTTCTATGTTTAATGTTCTAAGCTATTAAACTAGGACAAATTAATCATTTAATATGTTCCTCATATAGGTTTAAAAGATAGATATGCCCCAAATGTATGGAACAATCAACCTTCTCTCCTTATGCATAGTGCTGTATTTTCTTAAAGCCTGTTTGATCTGTAATTGTGGTGTTTTACTTTCTTTTCCCCACAGGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGAATTTCTTTGTTGTCGTAAGTTGTTTCCTCCTCGAGACTCAAAATTCCTAAATTTATAAAATAATTCGTGACCGCATACTGGTGAGTAGGTATCTTCCTACACTACTATTAAAATGTTCCAATTTCTCATTTTCTGGAAGAAATTATGTCAATCATACTCCCGTTGTTCACACTACGTCTTTTGGTTTACAAATAGTTTTTTGATGTTGTGGACTCCACATAATTTTTAAAAGAAAATTCCTCATTTTCTACCTTTCTTTCTCATAGTTGTCAGAAATTTAATGGTAGTGTGTAGAAAGATTCCTATCCACCAGTATACAACCAAGTATTTTTCAAAATTTTAACTTGTACATTTGATCTGTTTTCATTCTATAGGTATGGATTCGGTGCATACTTCAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGGCATGGCTCTGAAGGTATATAACTTTCTATTTTTTCCCCTTCTGCAGTGTACAAAGGGATTAACGTGATAAATATAAGCTTTCAATGGCTGTTACTTCAGTAGCCACATCCATCTTCAGGTCATTTCAGCCTTTCTAGACCCTATATAAGTTATAACTCAGTCGCTGTTCCAAATTAAAAAATTTATCAAGCCGTTTCTATCAGGTGTTTTTTTACAAAAGTAGTGTCATGTTACCACTTTCTATGTTTCATTTGTTATTTCCTTTCTGAAATGGCCTTTCAGGGTTGCTTCTTTCTTTCTAATTCCTTTAGCTTCATGTACTTGAGCTGAAAAGGAAAATAATTGGTAGAGAAAATCTGGTAACTCATTCTAGCTTTTGACTGTTTTGCAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAATCATGCGCCACCCCTATTCTCAAACAGGTTGAAATTTGATTCTTTCTAATGGCCATGCTAGCAAATTATGTTGTAAATATGTTTTCTTGTGAGTGACTGTTTTGATAGACCCCGTTCTTGTACATTATATTTAGAGAAGGAGGAGGAGGAACAAAAGTGTAATTAGAATCTTCTGGAGAAAGAAAGTGGGGCCCAAACTTGAGGAAATCTATACTTGTCGAGGATTATTGGGAGGGAGTCCCTCATTGGCTAACTTAGAGTATGATCATGGGTTTATAAGGAATACATCTCTATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCAAACTATTGTGGAGAGTCGTGATTCCTAACATGGTATTAGAGCCATGCCCATAACTTAGCCATGTTAATAGAATCCTCAAATATTGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAACTGACTCCAGAGAAGGAGTCAAGCCTCGATTAAGGGGAGGTTGTTTGACAACTTGGGAGAAGAATGAATTTTTCATTTTGTGTGAATATTATTGTTCCAACTTACAATTGAAAAGTTATCATTTAATTCACTAAGAACAAGAAGCTCGCCTTTTGTTTCAATTTGACTGTTACTTCAATAGTATGTCACTTGCGAGTTCAACTGACATTGTCTCAAATGTATAATCATTTTGTATATACACAATTTCTATTGTATGAACTGTTTCATATTTCTAATCACTTTTTAAAGTTTTTCACTAGGTAAGAGATGATGTGATAAGGTACCGCTATGGGGATGAACAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTTTGGTCTGGTAAGTAAACTGGCGCCATTTGAATCTTCTTTTATGTGATCTTTGATTACATTTTTACGTGGTTGTAATGTTGTGGATTCTTCTTACATCATTAGCAATATATCAATTCAAAAGACTCCTGCTTTATCAGTATAGAAAGCTGGCTTCACTTTCACTTGGCTGTTGCATTGTTATAAAACTAGAATTCAATTCACTTTCACTTGGCTTCATTTTTTGGACTGAAGCTGTTCGAACTCTGGTTCATGCTTGTCCTATTTGAATTTTGGATCCAGCAAATAATCAAATACATAGGACCAGGTGTACACATTTTGACCTTAATGGGAAATTGCATCCATTGTGTATTTGATTCTCATTTTTTTGCTTTTACACGGATTTTTGCTAACCGATCTTCATTGCATTCTACTTCTGTATACACAGGCTGGGGGAATTCCTCGAAGGAGTGCACCTATTTTGCAAAGTATTCGTGAAGAAGTATGTTTACGTGACTTGACTTTGTATTTATTTCATATATCACTGGTCACCTCAGTACTTAGGACGCTTCTGATTGTACCAACTAGAAGTACTACTGAATACAATAGCATGTTATCAGCACTTACGATTCTAATATTCTGCCATTTGCTACAATTCTAGGTTACAGAAGACGGAAAATATTGCCTGGTCTTGGTGTTTGAAGCGAAAGCCTTGACATTGTCAGATTTTGAGAAAAGACAGGTAATTGAGGCATGATTCTTCTTGTATCGTTGAAGAAAGAGTGCTAACTCTCTAGGGGATTATATTTAATTGCTCAATATTTTGCTAGTGCTGATGTAGTCATGATGATAAATGTTTCTGCTAATTCTAAGGGAAGAATAATACTCGGAAGATTTACAAGCGTTCCTTACAGCGAACATATTTGTAAAGACATTGTTAAAAGATCACCACCACTAAATTAGTTTCTTTAATGAATTTACAGGCAAAATTTGCTTCTTTCTTTGGACCAGGGATCGCTGCTGAAGTTGGTGAGCTTTATACTACGCTTATTTTATCCTTTTTTTTGTTTGTCATTTTACCATCGTTAACTGAATTTTTTTACGTGAACATTGCTTTAAAACTTTTGCAGGGAAGGGAGATAATGATCTGTATGAAGTCCGGCTTATTTCTAACACTATTCCTGGTGCTTCACCATCATAA

mRNA sequence

ATGAGTGGAATATCGCCTCCTGCTGCTCTCTGTTCTCATGACAAATTCACTCTCCCCAATCGCCTCTCCCTTGTTTCTCTGCGTTTCTCTCGTCCCTACTGCGCAACCTCTCTGCCAGGCGGCGGCAACCGGAACGGTAGAGCCAACTTTTTCGTCCATTTCGAACCGAGAGCTCCTCTACAGAAGCCTCAACGTTTAGCTTTCACATTCTCGGCTAGGGCTGCTGATACTACTCAGCCGTCTTCTGTTTCAGCCTCGCCGGATAAAGCAGTAGTTACCGATGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGAATTTCTTTGTTGTCGTATGGATTCGGTGCATACTTCAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGGCATGGCTCTGAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAATCATGCGCCACCCCTATTCTCAAACAGGTAAGAGATGATGTGATAAGGTACCGCTATGGGGATGAACAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTTTGGTCTGGCTGGGGGAATTCCTCGAAGGAGTGCACCTATTTTGCAAAGTATTCGTGAAGAAGTTACAGAAGACGGAAAATATTGCCTGGTCTTGGTGTTTGAAGCGAAAGCCTTGACATTGTCAGATTTTGAGAAAAGACAGGCAAAATTTGCTTCTTTCTTTGGACCAGGGATCGCTGCTGAAGTTGGGAAGGGAGATAATGATCTGTATGAAGTCCGGCTTATTTCTAACACTATTCCTGGTGCTTCACCATCATAA

Coding sequence (CDS)

ATGAGTGGAATATCGCCTCCTGCTGCTCTCTGTTCTCATGACAAATTCACTCTCCCCAATCGCCTCTCCCTTGTTTCTCTGCGTTTCTCTCGTCCCTACTGCGCAACCTCTCTGCCAGGCGGCGGCAACCGGAACGGTAGAGCCAACTTTTTCGTCCATTTCGAACCGAGAGCTCCTCTACAGAAGCCTCAACGTTTAGCTTTCACATTCTCGGCTAGGGCTGCTGATACTACTCAGCCGTCTTCTGTTTCAGCCTCGCCGGATAAAGCAGTAGTTACCGATGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGAATTTCTTTGTTGTCGTATGGATTCGGTGCATACTTCAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGGCATGGCTCTGAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAATCATGCGCCACCCCTATTCTCAAACAGGTAAGAGATGATGTGATAAGGTACCGCTATGGGGATGAACAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTTTGGTCTGGCTGGGGGAATTCCTCGAAGGAGTGCACCTATTTTGCAAAGTATTCGTGAAGAAGTTACAGAAGACGGAAAATATTGCCTGGTCTTGGTGTTTGAAGCGAAAGCCTTGACATTGTCAGATTTTGAGAAAAGACAGGCAAAATTTGCTTCTTTCTTTGGACCAGGGATCGCTGCTGAAGTTGGGAAGGGAGATAATGATCTGTATGAAGTCCGGCTTATTTCTAACACTATTCCTGGTGCTTCACCATCATAA

Protein sequence

MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

Homology

[Close]

BLAST of Csor.00g120200 vs. ExPASy Swiss-Prot
Match: Q55403 (Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0575 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.7e-24
Identity = 76/186 (40.86%), Postives = 103/186 (55.38%), Query Frame = 0


Query: 99  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPV 158
           L K+S   +GL VG  L   GF AY   L  +  +     YG PL + G+ALK AELKP+
Sbjct: 2   LPKISLAAVGLTVGGILTITGFVAY--ALDYATLNLAGFFYGIPLVLGGLALKAAELKPI 61

Query: 159 PCL--TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRS 218
           P    T  +   LR   ATP   Q+R DV RYRYG E HLDE+L+R+   GL+     R 
Sbjct: 62  PFSQPTSEKIIALRNQLATPTQNQIRKDVTRYRYGQEAHLDESLERL---GLSPTDEER- 121

Query: 219 APILQSIREEVTEDGKYCLVLVFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLY 278
            P+L S+ E+  E GKY L L F +  ++L  ++++Q K A FFGP +   V + +  + 
Sbjct: 122 -PVLTSLLEQDWE-GKYVLTLTFTSPFISLETWQEKQEKIAKFFGPDLEVTVAEPEEKVV 179

Query: 279 EVRLIS 283
            V LIS
Sbjct: 182 TVNLIS 179

[Close]

BLAST of Csor.00g120200 vs. NCBI nr
Match: XP_022956448.1 (uncharacterized protein LOC111458174 [Cucurbita moschata] >KAG6602567.1 hypothetical protein SDJN03_07800, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033244.1 hypothetical protein SDJN02_07298 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 580 bits (1496), Expect = 6.41e-209
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL 60
           MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL
Sbjct: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL 60

Query: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120
           QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF
Sbjct: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120

Query: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180
           GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ
Sbjct: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180

Query: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240
           VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE
Sbjct: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240

Query: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291
           AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Sbjct: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291

[Close]

BLAST of Csor.00g120200 vs. NCBI nr
Match: XP_022989929.1 (uncharacterized protein LOC111486968 [Cucurbita maxima])

HSP 1 Score: 577 bits (1487), Expect = 1.51e-207
Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL 60
           MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVH EPRAPL
Sbjct: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPL 60

Query: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120
           QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF
Sbjct: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120

Query: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180
           GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ
Sbjct: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180

Query: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240
           VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FE
Sbjct: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFE 240

Query: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291
           AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Sbjct: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291

[Close]

BLAST of Csor.00g120200 vs. NCBI nr
Match: XP_023524489.1 (uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 576 bits (1485), Expect = 3.05e-207
Identity = 288/291 (98.97%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL 60
           MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGN NGRANFFVHFEPRAPL
Sbjct: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNWNGRANFFVHFEPRAPL 60

Query: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120
           QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF
Sbjct: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120

Query: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180
           GAYFN+LPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ
Sbjct: 121 GAYFNVLPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180

Query: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240
           VRDDV+RYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE
Sbjct: 181 VRDDVLRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240

Query: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291
           AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Sbjct: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291

[Close]

BLAST of Csor.00g120200 vs. NCBI nr
Match: XP_004141498.1 (uncharacterized protein LOC101213350 [Cucumis sativus] >KGN52572.1 hypothetical protein Csa_009392 [Cucumis sativus])

HSP 1 Score: 494 bits (1272), Expect = 9.84e-175
Identity = 252/292 (86.30%), Postives = 264/292 (90.41%), Query Frame = 0


Query: 1   MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60
           ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVHFE   
Sbjct: 3   ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTT 62

Query: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120
            L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFSLAKVSFGVIGLGVG+SLLSY
Sbjct: 63  LLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSY 122

Query: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182

Query: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLV
Sbjct: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 242

Query: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
           FEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Sbjct: 243 FEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP 294

[Close]

BLAST of Csor.00g120200 vs. NCBI nr
Match: KAA0039379.1 (thylakoid membrane protein [Cucumis melo var. makuwa] >TYK00567.1 thylakoid membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 491 bits (1265), Expect = 1.15e-173
Identity = 250/292 (85.62%), Postives = 266/292 (91.10%), Query Frame = 0


Query: 1   MSGISPPAALC--SHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60
           ++ ISP   L   SH +FTL NRLSL+SL FSRP    SLPGGGN   R N FVHFE + 
Sbjct: 3   ITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPISLPGGGNFIARTNVFVHFETKT 62

Query: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120
            L KP RLAFTFS RAAD+TQPS+VSASPDKAVVTDDEFSLAKVSFGVIGLGVG+SLLSY
Sbjct: 63  LLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLLSY 122

Query: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182

Query: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPIL+SIREEVTEDGKYCLVLV
Sbjct: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLVLV 242

Query: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
           FEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISN+IPGASP
Sbjct: 243 FEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294

[Close]

BLAST of Csor.00g120200 vs. ExPASy TrEMBL
Match: A0A6J1GWV5 (uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC111458174 PE=4 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 3.10e-209
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL 60
           MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL
Sbjct: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL 60

Query: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120
           QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF
Sbjct: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120

Query: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180
           GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ
Sbjct: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180

Query: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240
           VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE
Sbjct: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240

Query: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291
           AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Sbjct: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291

[Close]

BLAST of Csor.00g120200 vs. ExPASy TrEMBL
Match: A0A6J1JQQ4 (uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968 PE=4 SV=1)

HSP 1 Score: 577 bits (1487), Expect = 7.31e-208
Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRAPL 60
           MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVH EPRAPL
Sbjct: 1   MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPL 60

Query: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120
           QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF
Sbjct: 61  QKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGF 120

Query: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180
           GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ
Sbjct: 121 GAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQ 180

Query: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFE 240
           VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FE
Sbjct: 181 VRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFE 240

Query: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291
           AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Sbjct: 241 AKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS 291

[Close]

BLAST of Csor.00g120200 vs. ExPASy TrEMBL
Match: A0A0A0KVX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1)

HSP 1 Score: 494 bits (1272), Expect = 4.76e-175
Identity = 252/292 (86.30%), Postives = 264/292 (90.41%), Query Frame = 0


Query: 1   MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60
           ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVHFE   
Sbjct: 3   ITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFETTT 62

Query: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120
            L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFSLAKVSFGVIGLGVG+SLLSY
Sbjct: 63  LLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLLSY 122

Query: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182

Query: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLV
Sbjct: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 242

Query: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
           FEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Sbjct: 243 FEAKALTLSDFEKRQAKFASFFGPGITAEVGKGENDLYEVRLTSNTIPGASP 294

[Close]

BLAST of Csor.00g120200 vs. ExPASy TrEMBL
Match: A0A5A7TDN5 (Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001820 PE=4 SV=1)

HSP 1 Score: 491 bits (1265), Expect = 5.55e-174
Identity = 250/292 (85.62%), Postives = 266/292 (91.10%), Query Frame = 0


Query: 1   MSGISPPAALC--SHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60
           ++ ISP   L   SH +FTL NRLSL+SL FSRP    SLPGGGN   R N FVHFE + 
Sbjct: 3   ITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPISLPGGGNFIARTNVFVHFETKT 62

Query: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120
            L KP RLAFTFS RAAD+TQPS+VSASPDKAVVTDDEFSLAKVSFGVIGLGVG+SLLSY
Sbjct: 63  LLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLLSY 122

Query: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182

Query: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPIL+SIREEVTEDGKYCLVLV
Sbjct: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLVLV 242

Query: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
           FEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISN+IPGASP
Sbjct: 243 FEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294

[Close]

BLAST of Csor.00g120200 vs. ExPASy TrEMBL
Match: A0A1S3CAR1 (thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 SV=1)

HSP 1 Score: 489 bits (1260), Expect = 3.21e-173
Identity = 249/292 (85.27%), Postives = 265/292 (90.75%), Query Frame = 0


Query: 1   MSGISPPAALC--SHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60
           ++ ISP   L   SH +FTL NRLSL+SL FSRP     LPGGGN   R N FVHFE + 
Sbjct: 3   ITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPIPLPGGGNFIARTNVFVHFETKT 62

Query: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120
            L KP RLAFTFS RAAD+TQPS+VSASPDKAVVTDDEFSLAKVSFGVIGLGVG+SLLSY
Sbjct: 63  LLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLLSY 122

Query: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPIL
Sbjct: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPIL 182

Query: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+GLAGGIPRRSAPIL+SIREEVTEDGKYCLVLV
Sbjct: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLVLV 242

Query: 241 FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP 290
           FEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISN+IPGASP
Sbjct: 243 FEAKALTLSDFEQRQAKFASFFGPGITAEVGKGENDLYEVRLISNSIPGASP 294

[Close]

BLAST of Csor.00g120200 vs. TAIR 10
Match: AT5G38660.1 (acclimation of photosynthesis to environment )

HSP 1 Score: 342.0 bits (876), Expect = 4.6e-94
Identity = 173/223 (77.58%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 62  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFG 121
           K + L      RAAD+T  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFG
Sbjct: 54  KREVLKLDVVGRAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFG 113

Query: 122 AYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQV 181
           AYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+Y +A KLRESCATPIL QV
Sbjct: 114 AYFTILPGTEWSAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQV 173

Query: 182 RDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEA 241
           R+DV RYRYGDEQHL+EALKRIFQ+GL GGIPRRSAPILQ IREEV  DG+YC+VLVFEA
Sbjct: 174 RNDVTRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEA 233

Query: 242 KALTLSDFEKRQAKFASFFGPGIAAEVGKGDND-LYEVRLISN 284
           KALTLSDFEKRQAKF SFFGP I AEVGKG+++ LYEVRLISN
Sbjct: 234 KALTLSDFEKRQAKFTSFFGPNITAEVGKGESENLYEVRLISN 276

[Close]

BLAST of Csor.00g120200 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-87
Identity = 161/207 (77.78%), Postives = 179/207 (86.47%), Query Frame = 0


Query: 62  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFG 121
           K + L      RAAD+T  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFG
Sbjct: 54  KREVLKLDVVGRAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSLLSYGFG 113

Query: 122 AYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQV 181
           AYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+Y +A KLRESCATPIL QV
Sbjct: 114 AYFTILPGTEWSAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCATPILTQV 173

Query: 182 RDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEA 241
           R+DV RYRYGDEQHL+EALKRIFQ+GL GGIPRRSAPILQ IREEV  DG+YC+VLVFEA
Sbjct: 174 RNDVTRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEA 233

Query: 242 KALTLSDFEKRQAKFASFFGPGIAAEV 269
           KALTLSDFEKRQAKF SFFGP I AEV
Sbjct: 234 KALTLSDFEKRQAKFTSFFGPNITAEV 260

The following BLAST results are available for this feature:

BLAST of Csor.00g120200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55403	3.7e-24	40.86	Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]

BLAST of Csor.00g120200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956448.1	6.41e-209	100.00	uncharacterized protein LOC111458174 [Cucurbita moschata] >KAG6602567.1 hypothet...	[more]
XP_022989929.1	1.51e-207	99.31	uncharacterized protein LOC111486968 [Cucurbita maxima]	[more]
XP_023524489.1	3.05e-207	98.97	uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo]	[more]
XP_004141498.1	9.84e-175	86.30	uncharacterized protein LOC101213350 [Cucumis sativus] >KGN52572.1 hypothetical ...	[more]
KAA0039379.1	1.15e-173	85.62	thylakoid membrane protein [Cucumis melo var. makuwa] >TYK00567.1 thylakoid memb...	[more]

BLAST of Csor.00g120200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWV5	3.10e-209	100.00	uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC1114581...	[more]
A0A6J1JQQ4	7.31e-208	99.31	uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968...	[more]
A0A0A0KVX1	4.76e-175	86.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1	[more]
A0A5A7TDN5	5.55e-174	85.62	Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CAR1	3.21e-173	85.27	thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 ...	[more]

BLAST of Csor.00g120200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38660.1	4.6e-94	77.58	acclimation of photosynthesis to environment	[more]
AT5G38660.2	1.1e-87	77.78	acclimation of photosynthesis to environment	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021275	Protein of unknown function DUF2854	PFAM	PF11016	DUF2854	coord: 118..268 e-value: 6.3E-49 score: 165.6
IPR021275	Protein of unknown function DUF2854	PANTHER	PTHR35551	FAMILY NOT NAMED	coord: 57..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g120200.m01	Csor.00g120200.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane