Csor.00g120140 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g120140
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	60S ribosomal protein L10-like
Location	Csor_Chr04: 20385155 .. 20387005 (-)
RNA-Seq Expression	Csor.00g120140
Synteny	Csor.00g120140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGAAGTACGAATTTTTTTTCCATTTCTTCATCTAATATCTTCTTCCATCTTCCTCTTCAATGATTAATTTATCTGTCCCTCGTTATTTCTTGTTTATATTCGACGCAAAATCGAACTGTTGGAAATGGGTGGACCTTCGTCTGTTCCTCTTTGGAGATGTTGTGCTTTAGCCTTTCTATGATTATTTAAAAAAAAAAATATAAATCAGTGGTCTTGATGCAGTTAATTTGTTCTATATTTGCAATATTAAAGAATTTTATGATGTTACAAGCAGTAGGGCCAACTAATATTGATTTTACATTCGGTTCTTAAGATGTAATCTGTTTAATCTCACAATAAAATTATTATCATAGTGTAGAGTTGGCATCTATGTAAGCAGGCTCTTAAGTACGTAAACCCTGCACTGGAATGGGGTTTTTCCTTCCCTTGGAGGAATATTGTTTCTACTTTTGATAATCGCTCTTTAGTTGCAAATGTGTATTATTTAATAGGTGCTTTTGCTCGCTGGAAAATGTTTGTTGTTGATTGTTAGAATATGAAAGTTACGAAAATTGATGTGTGCGTAGCAAGGCTCATCATGTTCTTTTGAGTTGATGGTCTCTCTCAACTTGTATGCGGGCATCATTATTTTTCCGGACAAGTCACAGCCCTGAATAATTTTTTCTGTTGGCTCATTCTTATTATAATTTGATCATCACAATTCTTTCTGGCTCTATTGTGCGTAAAAGGTTGTTGCCTGATATTCATTAATTTTCATTTTTTTGTAGGACCTGCAAGGTGTTACCGGCAAATTAAAAACAAGCCTTATCCAAAATCCAGGTTCTGTCGTGGTGTCCCTGACCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCATTCTGTGTTCATCTAGTGAGTTGGGAGAAAGAAAATGTGTCTAGCGAGGCGTTGGAAGCTGCTAGGATTGCCTGCAATAAGTACATGTCTAAGTTTGCCGGGAAGGATGCATTCCACTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACTAGGAACTTGTGCAAGAGTGGCCATTGGGCAGGTTCTTCTTTCAGTTCGCTGCAAGGATAACAACAGCCAGCATGCACAGGAGGCCCTACGCCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGTAGGAAGTGGTATGAATTTTTGCATTCCCTCTCTCTCTCTCTCTCCGTAGCCAAACGAGATGTGTTTTTGTTGCTTGTGGAGCAATTTGTGAAAGTTTCCTTGACTGATTTACAAAATCTTCAAATTTCCAGGGGATTCACAAAGTTCAGTCGGGCCGAATATCTGGCTTATAAGGCAGAGAACAAAATTGTGCCGGACGGTGTCAATGCCAAGGTTAGCTATATTGCATTCATCCCATACGCTTGCTATCCTGTTGTTTGGACGTCGGGTTAGCTATGTCTATGAGTATGCTACTTCTTTTGTGAAAATTATAATTGCATGGAATTGATGACTTTTTACATTAAAAAGCATATGATCTCAGCTAAGATATTAACTGGGTCGTAGAATCATGTTTGTCGTAGCACGTCTTGTGATATTTTATTTGGTCCATCATCCCGATGAAACGCCATAATATGGTCAATATGTTTATTTTTGAGTTGTTAACTGATGGAGTTGCAACTGGGCTTTGCTTGCAGCTCCTTGGATGCCATGGACCCTTAGCAAACCGTCAACCTGGAAGAGCTTTTCTACCTCAAGCTGTCTAA

mRNA sequence

ATGGGTAGAAGACCTGCAAGGTGTTACCGGCAAATTAAAAACAAGCCTTATCCAAAATCCAGGTTCTGTCGTGGTGTCCCTGACCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCATTCTGTGTTCATCTAGTGAGTTGGGAGAAAGAAAATGTGTCTAGCGAGGCGTTGGAAGCTGCTAGGATTGCCTGCAATAAGTACATGTCTAAGTTTGCCGGGAAGGATGCATTCCACTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACTAGGAACTTGTGCAAGAGTGGCCATTGGGCAGGTTCTTCTTTCAGTTCGCTGCAAGGATAACAACAGCCAGCATGCACAGGAGGCCCTACGCCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGTAGGAAGTGGGGATTCACAAAGTTCAGTCGGGCCGAATATCTGGCTTATAAGGCAGAGAACAAAATTGTGCCGGACGGTGTCAATGCCAAGCTCCTTGGATGCCATGGACCCTTAGCAAACCGTCAACCTGGAAGAGCTTTTCTACCTCAAGCTGTCTAA

Coding sequence (CDS)

ATGGGTAGAAGACCTGCAAGGTGTTACCGGCAAATTAAAAACAAGCCTTATCCAAAATCCAGGTTCTGTCGTGGTGTCCCTGACCCTAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCATTCTGTGTTCATCTAGTGAGTTGGGAGAAAGAAAATGTGTCTAGCGAGGCGTTGGAAGCTGCTAGGATTGCCTGCAATAAGTACATGTCTAAGTTTGCCGGGAAGGATGCATTCCACTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCACTAGGAACTTGTGCAAGAGTGGCCATTGGGCAGGTTCTTCTTTCAGTTCGCTGCAAGGATAACAACAGCCAGCATGCACAGGAGGCCCTACGCCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGTAGGAAGTGGGGATTCACAAAGTTCAGTCGGGCCGAATATCTGGCTTATAAGGCAGAGAACAAAATTGTGCCGGACGGTGTCAATGCCAAGCTCCTTGGATGCCATGGACCCTTAGCAAACCGTCAACCTGGAAGAGCTTTTCTACCTCAAGCTGTCTAA

Protein sequence

MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAEYLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV

Homology

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BLAST of Csor.00g120140 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.2e-117
Identity = 202/216 (93.52%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP G CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR +
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 217
           YL YK+EN+IVPDGVNAKLLG HGPLA RQPGRAFL
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFL 216

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BLAST of Csor.00g120140 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.2e-117
Identity = 196/216 (90.74%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKWGFTKF+R +
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y+ +K++N+I+PDGVNAKLLGCHGPLANRQPG+AF+
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFI 216

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BLAST of Csor.00g120140 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 1.8e-116
Identity = 199/216 (92.13%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP G CARVAIGQVLLSVRCKDNNS +AQEALRRAKFKFPGRQKIIVSRKWGFTK +RA+
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y   K+EN+I+PDGVNAKLLGCHG LANR+PGRAF+
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFI 216

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BLAST of Csor.00g120140 vs. ExPASy Swiss-Prot
Match: Q93VT9 (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 7.2e-113
Identity = 192/217 (88.48%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           K LGTCARVAIGQVLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLP 218
           +   + E ++VPDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

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BLAST of Csor.00g120140 vs. ExPASy Swiss-Prot
Match: Q08770 (60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-112
Identity = 192/216 (88.89%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           K LGTCARVAIGQVLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y   + E +IVPDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFL 216

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BLAST of Csor.00g120140 vs. NCBI nr
Match: XP_022960234.1 (60S ribosomal protein L10-like [Cucurbita moschata] >XP_022990699.1 60S ribosomal protein L10-like [Cucurbita maxima] >XP_023553586.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >KAG6602573.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456 bits (1173), Expect = 4.65e-162
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE
Sbjct: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV
Sbjct: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220

[Close]

BLAST of Csor.00g120140 vs. NCBI nr
Match: XP_038891235.1 (60S ribosomal protein L10-like [Benincasa hispida])

HSP 1 Score: 447 bits (1149), Expect = 2.13e-158
Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YLAYKAENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQA 
Sbjct: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 220

[Close]

BLAST of Csor.00g120140 vs. NCBI nr
Match: XP_008459481.1 (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo])

HSP 1 Score: 445 bits (1145), Expect = 2.14e-157
Identity = 213/220 (96.82%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 26  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 85

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 86  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 145

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 146 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 205

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YLAYKAENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQ  
Sbjct: 206 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 245

[Close]

BLAST of Csor.00g120140 vs. NCBI nr
Match: KAG6578494.1 (60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444 bits (1142), Expect = 2.48e-157
Identity = 212/220 (96.36%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YLAYKA+NKI+PDGVNAKLLGCHGPLANRQPGRAFLP+  
Sbjct: 181 YLAYKADNKILPDGVNAKLLGCHGPLANRQPGRAFLPETA 220

[Close]

BLAST of Csor.00g120140 vs. NCBI nr
Match: XP_004141510.1 (60S ribosomal protein L10 [Cucumis sativus] >KAE8648968.1 hypothetical protein Csa_009152 [Cucumis sativus])

HSP 1 Score: 443 bits (1140), Expect = 4.83e-157
Identity = 213/219 (97.26%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQA 219
           YLAYKAENKI+PDGVNAKLLGCHGPLANRQPGRAFL QA
Sbjct: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQA 219

[Close]

BLAST of Csor.00g120140 vs. ExPASy TrEMBL
Match: A0A6J1JSR2 (60S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111487512 PE=3 SV=1)

HSP 1 Score: 456 bits (1173), Expect = 2.25e-162
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE
Sbjct: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV
Sbjct: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220

[Close]

BLAST of Csor.00g120140 vs. ExPASy TrEMBL
Match: A0A6J1HAC9 (60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111461033 PE=3 SV=1)

HSP 1 Score: 456 bits (1173), Expect = 2.25e-162
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE
Sbjct: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV
Sbjct: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220

[Close]

BLAST of Csor.00g120140 vs. ExPASy TrEMBL
Match: A0A1S3CAD5 (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=3 SV=1)

HSP 1 Score: 445 bits (1145), Expect = 1.04e-157
Identity = 213/220 (96.82%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 26  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 85

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 86  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 145

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 146 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 205

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YLAYKAENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQ  
Sbjct: 206 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 245

[Close]

BLAST of Csor.00g120140 vs. ExPASy TrEMBL
Match: A0A6J1CM71 (60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111012895 PE=3 SV=1)

HSP 1 Score: 443 bits (1139), Expect = 3.45e-157
Identity = 212/220 (96.36%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YL YKAENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQ  
Sbjct: 181 YLNYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Csor.00g120140 vs. ExPASy TrEMBL
Match: A0A6J1D5K0 (60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111017508 PE=3 SV=1)

HSP 1 Score: 443 bits (1139), Expect = 3.45e-157
Identity = 211/220 (95.91%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           KP GTCARVAIGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA+
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLPQAV 220
           YL+YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQ  
Sbjct: 181 YLSYKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Csor.00g120140 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 407.9 bits (1047), Expect = 5.1e-114
Identity = 192/217 (88.48%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           K LGTCARVAIGQVLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLP 218
           +   + E ++VPDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Csor.00g120140 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-113
Identity = 192/216 (88.89%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           K LGTCARVAIGQVLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y   + E +IVPDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of Csor.00g120140 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-113
Identity = 193/216 (89.35%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
           K LGTCARVAIGQVLLSVRCKDN+  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAE
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFL 217
           Y   +A  +IVPDGVNAK L  HGPLANRQPG AF+
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFI 216

[Close]

BLAST of Csor.00g120140 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 274.2 bits (700), Expect = 8.8e-74
Identity = 139/217 (64.06%), Postives = 148/217 (68.20%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM                                            
Sbjct: 61  SSEALEAARIACNKYM-------------------------------------------- 120

Query: 121 KPLGTCARVAIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAE 180
                        VLLSVRCKD +  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 -------------VLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 160

Query: 181 YLAYKAENKIVPDGVNAKLLGCHGPLANRQPGRAFLP 218
           +   + E ++VPDGVNAK L CHGPLANRQPG AFLP
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 160

The following BLAST results are available for this feature:

BLAST of Csor.00g120140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93847	2.2e-117	93.52	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
Q9SPB3	2.2e-117	90.74	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
Q9M5M7	1.8e-116	92.13	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
Q93VT9	7.2e-113	88.48	60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1	[more]
Q08770	2.1e-112	88.89	60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2	[more]

BLAST of Csor.00g120140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960234.1	4.65e-162	100.00	60S ribosomal protein L10-like [Cucurbita moschata] >XP_022990699.1 60S ribosoma...	[more]
XP_038891235.1	2.13e-158	97.27	60S ribosomal protein L10-like [Benincasa hispida]	[more]
XP_008459481.1	2.14e-157	96.82	PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]	[more]
KAG6578494.1	2.48e-157	96.36	60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004141510.1	4.83e-157	97.26	60S ribosomal protein L10 [Cucumis sativus] >KAE8648968.1 hypothetical protein C...	[more]

BLAST of Csor.00g120140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSR2	2.25e-162	100.00	60S ribosomal protein L10-like OS=Cucurbita maxima OX=3661 GN=LOC111487512 PE=3 ...	[more]
A0A6J1HAC9	2.25e-162	100.00	60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111461033 PE=...	[more]
A0A1S3CAD5	1.04e-157	96.82	60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=3 SV=1	[more]
A0A6J1CM71	3.45e-157	96.36	60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111012895 PE...	[more]
A0A6J1D5K0	3.45e-157	95.91	60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111017508 PE...	[more]

BLAST of Csor.00g120140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14320.1	5.1e-114	88.48	Ribosomal protein L16p/L10e family protein	[more]
AT1G26910.1	1.5e-113	88.89	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	4.3e-113	89.35	senescence associated gene 24	[more]
AT1G14320.2	8.8e-74	64.06	Ribosomal protein L16p/L10e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 1..216 e-value: 4.8E-117 score: 391.2
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 4..173
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 12..166 e-value: 2.9E-36 score: 124.4
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 41..166 e-value: 4.21933E-44 score: 141.475
IPR001197	Ribosomal protein L10e	PIRSF	PIRSF005590	RPL10a_RPL10e	coord: 1..182 e-value: 3.7E-95 score: 314.5
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 1..174 e-value: 2.0E-77 score: 256.6
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 1..217
None	No IPR available	PANTHER	PTHR11726:SF42	60S RIBOSOMAL PROTEIN L10-LIKE	coord: 1..217
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 108..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g120140.m01	Csor.00g120140.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome