Csor.00g119930 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g119930
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	cell wall protein RBR3-like isoform X2
Location	Csor_Chr04: 20463345 .. 20465641 (-)
RNA-Seq Expression	Csor.00g119930
Synteny	Csor.00g119930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTCAGAAACGAAATCTCAGAGTTCGAAAACCGCTCGCGGATTGTACGAATACCGTACTCTCCTCGCAATCGTCGGCTTCGAACTTATCTGCTGCAATCAAACCTCGCAAACGTGTAGTTAAATCCGCGGTTAAGGATGTTGTCAACAATGAGAAGGAAGGTGTATCAAGTTTGGCGTCTGCATCTACATCCGTTAATTTGCAAGCTTCGAACCCTAGTTCTGAGTTTCTTCCTACACAACCTAGCTCTAATCTTCCTCCTGCGGAATCAAACCCTAGTTCTGATTCTCTTCCTACTGAACCTAGTTCCAGTAGTGTTCCTGCAGAAGTCTCCACTCCTTCCCGGTTTGTTGATTTGCCATCTAGTTCGGGTAATTTTACTTACGGTATTCATTGCCTTGATTTGATTTTGGTGTTTGGTCCTTAATGATTTTAGTTTGAATTACTGATTCTCTAAGCTTCTGTAACTGTTACTCCCTATTTGCTTAAAGAGGAATTCAGGAAATACTACTTTGTAATTTAAGGAGTACAATTAAGGTTGGGGATTGTTAGAAATTTTAAGTTGGAGGGATTTCTTGTTAATGTGTTAAGTTCTTCTGCGGAGTTGGAATTTCTGCCTGTGGGAGACTATTCTTCTGTATGTATGGTTATATGAAATAAGAACTTCAATATGGGAATTTTTTTTTCTCTTCAATTTTTCCATTGTTTGACTCTGGATATTACGTCACATTTTTTATGTCAGGAACAGACCGTGTTCCGGAGCCCCAGTCATTCTACAGTCGAAGGCACCCTGCGAATAGAAGGAAGAGCACGGAGACAGCAGCTGCACCATTTATTTTTTCTACTGCATCGAAAATTCTATCTCGGTAAATCTCTTTGCACTTTTCAATATCTGATACGCTTAATAGATTTAACTTCTGAAATCAGTGTGATTTAGTCGTTGGTTCATAATACCGAATGAGAGTTTACCATGTTATTTATGTGCTAATGGCATTCATTCAATGGTTCTGAAGTGGAGCAGTTTTCCTTCTCTGCAATAATTATCATGGCCTGCCCATGCCCCGCCTTTTGGAAAAATTAATCAGTTATCTATCCTGGTTTATGCGTTGCATTTATTCTTGAAGTAAAATTTGACCGTTTAAGCAATTACTATTCTGGTTGATCTTGGGTTACTCTGACTTTATCTACATTAAGGAAACAATGGCACCCCCTAAATTAGGTTTTGTCAACCCATTTTCTGTTTTATTGTTGGTGATAGGTTGATTGAGCTTCAATTGTTTGACTGCTTTAGGATGAATAGCTCTAGTCTGTTGAGGCTTTCATCTTTCTAATCGAATGATTGTTTGGCTTCTTAATGGCCATTTTTTTTAAAATTTTATAATTAAATGGACAAAGATAAATTTAAGATAGTTGGGCATGAGTGATGATAATACCAATGCTACAATGTATCTGGAAAGATACGGGTTAATGGATACAAGAAATGTGTCTCCTAATCCCTCATTTTCAGTTTATTACTCATTCAGTTGTAAATAATTCCCTTGCTTTTATGTAGGGGTGAGAAAAGAGCTGCAGACAGTAGCCCATCCAGAGCGAGGACTGTTCCTTATAGAAAGGTCCGTCTAAAAATTATAGCACTCACAATTCTTTTAATCTGTCAAACTATACTCAGGGCATACTTCTATCCTCGTCTTATTACTCTTTAGTCAGAAAATTTTGTGTCCGGACATTTCTCTAAGAAATATGATTTTATCTGTGCTTATTATCTATACCACAACTCATGATCTCTGTTCCCTATTAATTGGTACCATTGTATGAATGGTACTCATTGTCATGGTTTATATTTTTAGGAAGCGAATTCTCCCTTTTACCCTTATTTGCATAAACTCTAGTAATTGGAGGTCTAGCAATCTTCTAGGAGATTATTAATTGATTAGAGACTGACTTCCGGTTCTTCGTATAGATTATTCTTGGAACGACACAGCTGACAATGCCCTCATTTCAGTCTAAGCCATTAAATTCACTACTCCTCAGTTTTGGTAGCCTTACTTTTACTAATATTATGACATAATGTTATCAGTCAGGTAGTAAGAATCTGAAATCATAGTTCAACAAATTGTACTAATGAGCGCCTATTATTAATATGGGCAGAGGCAGCGTGGCACGATATATGGGGAAGATGAATCCAAGATTGAGCTTCCACGGGAATTTGTTGAGAAGCAGAAAGCATACTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGATTCAGAGTAG

mRNA sequence

ATGGAATCTCAGAAACGAAATCTCAGAGTTCGAAAACCGCTCGCGGATTGTACGAATACCGTACTCTCCTCGCAATCGTCGGCTTCGAACTTATCTGCTGCAATCAAACCTCGCAAACGTGTAGTTAAATCCGCGGTTAAGGATGTTGTCAACAATGAGAAGGAAGGTGTATCAAGTTTGGCGTCTGCATCTACATCCGTTAATTTGCAAGCTTCGAACCCTAGTTCTGAGTTTCTTCCTACACAACCTAGCTCTAATCTTCCTCCTGCGGAATCAAACCCTAGTTCTGATTCTCTTCCTACTGAACCTAGTTCCAGTAGTGTTCCTGCAGAAGTCTCCACTCCTTCCCGGTTTGTTGATTTGCCATCTAGTTCGGGAACAGACCGTGTTCCGGAGCCCCAGTCATTCTACAGTCGAAGGCACCCTGCGAATAGAAGGAAGAGCACGGAGACAGCAGCTGCACCATTTATTTTTTCTACTGCATCGAAAATTCTATCTCGGGGTGAGAAAAGAGCTGCAGACAGTAGCCCATCCAGAGCGAGGACTGTTCCTTATAGAAAGAGGCAGCGTGGCACGATATATGGGGAAGATGAATCCAAGATTGAGCTTCCACGGGAATTTGTTGAGAAGCAGAAAGCATACTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGATTCAGAGTAG

Coding sequence (CDS)

ATGGAATCTCAGAAACGAAATCTCAGAGTTCGAAAACCGCTCGCGGATTGTACGAATACCGTACTCTCCTCGCAATCGTCGGCTTCGAACTTATCTGCTGCAATCAAACCTCGCAAACGTGTAGTTAAATCCGCGGTTAAGGATGTTGTCAACAATGAGAAGGAAGGTGTATCAAGTTTGGCGTCTGCATCTACATCCGTTAATTTGCAAGCTTCGAACCCTAGTTCTGAGTTTCTTCCTACACAACCTAGCTCTAATCTTCCTCCTGCGGAATCAAACCCTAGTTCTGATTCTCTTCCTACTGAACCTAGTTCCAGTAGTGTTCCTGCAGAAGTCTCCACTCCTTCCCGGTTTGTTGATTTGCCATCTAGTTCGGGAACAGACCGTGTTCCGGAGCCCCAGTCATTCTACAGTCGAAGGCACCCTGCGAATAGAAGGAAGAGCACGGAGACAGCAGCTGCACCATTTATTTTTTCTACTGCATCGAAAATTCTATCTCGGGGTGAGAAAAGAGCTGCAGACAGTAGCCCATCCAGAGCGAGGACTGTTCCTTATAGAAAGAGGCAGCGTGGCACGATATATGGGGAAGATGAATCCAAGATTGAGCTTCCACGGGAATTTGTTGAGAAGCAGAAAGCATACTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGATTCAGAGTAG

Protein sequence

MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSLASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVDLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE

Homology

[Close]

BLAST of Csor.00g119930 vs. NCBI nr
Match: XP_022952551.1 (uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594.1 hypothetical protein SDJN03_07827, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033272.1 hypothetical protein SDJN02_07326 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424 bits (1089), Expect = 8.74e-149
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Csor.00g119930 vs. NCBI nr
Match: XP_023515045.1 (uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416 bits (1068), Expect = 1.39e-145
Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDV+NNEKEGVSS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVLNNEKEGVSSF 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSR VD
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRLVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKIL+RGEKRAADSSPSRA
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILTRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRG IYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGAIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Csor.00g119930 vs. NCBI nr
Match: XP_022952561.1 (uncharacterized protein LOC111455207 isoform X2 [Cucurbita moschata])

HSP 1 Score: 414 bits (1065), Expect = 3.70e-145
Identity = 232/234 (99.15%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSS  DRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA
Sbjct: 121 LPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232

[Close]

BLAST of Csor.00g119930 vs. NCBI nr
Match: XP_022991070.1 (uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima])

HSP 1 Score: 410 bits (1055), Expect = 1.33e-143
Identity = 225/234 (96.15%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVK AVKDVVNNEKEGVSS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSS+FLPTQPSSNLPPAES P+SDSLPTEPSSSS+PAEVSTPSR VD
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPF+FSTASKIL+RGEKRAADSSPSRA
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Csor.00g119930 vs. NCBI nr
Match: XP_023515126.1 (uncharacterized protein LOC111779162 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406 bits (1044), Expect = 5.86e-142
Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDV+NNEKEGVSS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVLNNEKEGVSSF 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSR VD
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRLVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSS  DRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKIL+RGEKRAADSSPSRA
Sbjct: 121 LPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILTRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRG IYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGAIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232

[Close]

BLAST of Csor.00g119930 vs. ExPASy TrEMBL
Match: A0A6J1GKJ2 (uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 4.23e-149
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Csor.00g119930 vs. ExPASy TrEMBL
Match: A0A6J1GKK7 (uncharacterized protein LOC111455207 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 1.79e-145
Identity = 232/234 (99.15%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSS  DRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA
Sbjct: 121 LPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232

[Close]

BLAST of Csor.00g119930 vs. ExPASy TrEMBL
Match: A0A6J1JRU8 (uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 410 bits (1055), Expect = 6.43e-144
Identity = 225/234 (96.15%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVK AVKDVVNNEKEGVSS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSS+FLPTQPSSNLPPAES P+SDSLPTEPSSSS+PAEVSTPSR VD
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPF+FSTASKIL+RGEKRAADSSPSRA
Sbjct: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

[Close]

BLAST of Csor.00g119930 vs. ExPASy TrEMBL
Match: A0A6J1JPQ1 (cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 401 bits (1031), Expect = 2.72e-140
Identity = 223/234 (95.30%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVK AVKDVVNNEKEGVSS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVD 120
           ASASTSVNLQASNPSS+FLPTQPSSNLPPAES P+SDSLPTEPSSSS+PAEVSTPSR VD
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLPAEVSTPSRLVD 120

Query: 121 LPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSRA 180
           LPSSS  DRVPEPQSFYSRRHPANRRKSTETAAAPF+FSTASKIL+RGEKRAADSSPSRA
Sbjct: 121 LPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSRA 180

Query: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
           RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 RTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232

[Close]

BLAST of Csor.00g119930 vs. ExPASy TrEMBL
Match: A0A6J1BXA7 (uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006488 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 9.01e-108
Identity = 184/258 (71.32%), Postives = 204/258 (79.07%), Query Frame = 0


Query: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
           ME+ KRNLR RKPL+DCTNTVLSSQSSASN S+ IKPR+RV+KSAVKD VNNEK+G SS 
Sbjct: 1   MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60

Query: 61  ASASTSVNLQASNPSSEFLPTQP------------------------SSNLPPAESNPSS 120
            SAS S+NLQASNPSS+ LPT+P                        SS+  P E N SS
Sbjct: 61  TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120

Query: 121 DSLPTEPSSSSVPAEVSTPSRFVDLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPF 180
           D LPTEPSSSS+PAE STP+R  DLPSSSGTDRV EPQSFYSRRHP N+RKSTE A  PF
Sbjct: 121 DCLPTEPSSSSLPAEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFTPF 180

Query: 181 IFSTASKILSRGEKRAADSSPSRARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFS 234
           IF+TASKI + GEKR   SSPS+ARTVP +KRQRGTIYG+DESKIELPREFVEKQKAYFS
Sbjct: 181 IFATASKIHTMGEKRDGYSSPSKARTVPCKKRQRGTIYGKDESKIELPREFVEKQKAYFS 240

[Close]

BLAST of Csor.00g119930 vs. TAIR 10
Match: AT3G56250.1 (unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi - 20; Plants - 21; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 4.8e-09
Identity = 75/231 (32.47%), Postives = 113/231 (48.92%), Query Frame = 0


Query: 11  RKPLADCTNTV-LSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSLASASTSVNL 70
           RKPLADCTNTV  SSQ S+S++  A       +K  V+     EK            VN 
Sbjct: 13  RKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEK---------PKDVNT 72

Query: 71  QASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVPAEVSTPSRFVDLPSSSGTDR 130
            A+ P     P   ++++ P     S+D      S +S P+   T    + +     T  
Sbjct: 73  SATAPEIASRPI--TTDVRPVTRRMSADL----ASPASAPSRPQTSRSDMGVSDKDFT-- 132

Query: 131 VPEPQSFYSRRHPANRRK-----STETAAAPFIFSTASKILSRGEKRAADSSPSRARTVP 190
             EP S Y+ R  A+ +K     S+ T+AA  I    S    +  ++A+++     +  P
Sbjct: 133 --EPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKKKTLKVAP 192

Query: 191 YRKRQRGTIYGEDESKIELP-REFVEKQKAYFSEVDAFELLVEEAKSSDSE 235
            +KRQR T+  E E  +    ++++EKQKAYF+E+DAFEL VEE  +SDS+
Sbjct: 193 -KKRQR-TVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD 222

The following BLAST results are available for this feature:

BLAST of Csor.00g119930 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g119930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952551.1	8.74e-149	100.00	uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594...	[more]
XP_023515045.1	1.39e-145	97.86	uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022952561.1	3.70e-145	99.15	uncharacterized protein LOC111455207 isoform X2 [Cucurbita moschata]	[more]
XP_022991070.1	1.33e-143	96.15	uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima]	[more]
XP_023515126.1	5.86e-142	97.01	uncharacterized protein LOC111779162 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g119930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKJ2	4.23e-149	100.00	uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GKK7	1.79e-145	99.15	uncharacterized protein LOC111455207 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JRU8	6.43e-144	96.15	uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JPQ1	2.72e-140	95.30	cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114877...	[more]
A0A6J1BXA7	9.01e-108	71.32	uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Csor.00g119930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56250.1	4.8e-09	32.47	unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Ba...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..132
None	No IPR available	PANTHER	PTHR35740	OS12G0111700 PROTEIN	coord: 2..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g119930.m01	Csor.00g119930.m01	mRNA