Csor.00g119850 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTGGTTGCTCGAAGAAACTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCGTTGTTCGTTCCCATGGCGTACAGGACGGTCGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGCGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAGAATATTTTCGAGGACTTCGCTCGTCAACGTAAGTGATGAAATCTAGTCACTGGTTGAGTCGATTCGTTCCCTCTCTTGACAAATCTAACGAACTCGTTGTTTCTTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAG ATGGATGTGGTTGCTCGAAGAAACTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCGTTGTTCGTTCCCATGGCGTACAGGACGGTCGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGCGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAGAATATTTTCGAGGACTTCGCTCGTCAACAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAG ATGGATGTGGTTGCTCGAAGAAACTCCTCGTCTTCCGTTTCGATGTTGAACCCTAATGCTCCGTTGTTCGTTCCCATGGCGTACAGGACGGTCGAGGATTTCTCTGACCAGTGGTGGAATTTGATCCAGTCCTCCCCGTGGTTTCGCGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAACGATTTTTCATTTGCAGAGAATGAAGAAATTGTTCTTCCGGATCTCGAGAATATTTTCGAGGACTTCGCTCGTCAACAGGAAGAGGAAGAATTTGAATTCTCCAAGGATTTGGTGCCAATGGGGGCTTTCAAATGGCATAAGGCTCAGACTGGAGCCGAGGTTCCCAGGTATGCTCAAAAGGCTCCCAAGATCGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAGCCGAGATAG MDVVARRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWNLIQSSPWFREYWLQERFQDPQNDFSFAENEEIVLPDLENIFEDFARQQEEEEFEFSKDLVPMGAFKWHKAQTGAEVPRYAQKAPKIVNVKVSPRTIHQPR Homology
BLAST of Csor.00g119850 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.6e-33 Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 0
BLAST of Csor.00g119850 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.4e-13 Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of Csor.00g119850 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 7.3e-10 Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 0
BLAST of Csor.00g119850 vs. NCBI nr
Match: KAG6602602.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 287 bits (735), Expect = 6.56e-98 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Csor.00g119850 vs. NCBI nr
Match: KAG7033281.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 285 bits (729), Expect = 1.56e-96 Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Csor.00g119850 vs. NCBI nr
Match: XP_022990060.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]) HSP 1 Score: 281 bits (720), Expect = 1.27e-95 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of Csor.00g119850 vs. NCBI nr
Match: XP_022992587.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]) HSP 1 Score: 265 bits (677), Expect = 4.61e-89 Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0
BLAST of Csor.00g119850 vs. NCBI nr
Match: XP_022939236.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita moschata]) HSP 1 Score: 263 bits (672), Expect = 2.67e-88 Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 0
BLAST of Csor.00g119850 vs. ExPASy TrEMBL
Match: A0A6J1JP33 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487067 PE=4 SV=1) HSP 1 Score: 281 bits (720), Expect = 6.17e-96 Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
BLAST of Csor.00g119850 vs. ExPASy TrEMBL
Match: A0A6J1JQA7 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111488890 PE=4 SV=1) HSP 1 Score: 265 bits (677), Expect = 2.23e-89 Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0
BLAST of Csor.00g119850 vs. ExPASy TrEMBL
Match: A0A6J1FFC6 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita moschata OX=3662 GN=LOC111445213 PE=4 SV=1) HSP 1 Score: 263 bits (672), Expect = 1.29e-88 Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 0
BLAST of Csor.00g119850 vs. ExPASy TrEMBL
Match: A0A0A0KBP8 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 GN=Csa_6G013350 PE=4 SV=1) HSP 1 Score: 259 bits (661), Expect = 6.15e-87 Identity = 123/140 (87.86%), Postives = 131/140 (93.57%), Query Frame = 0
BLAST of Csor.00g119850 vs. ExPASy TrEMBL
Match: A0A5D3BZS0 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001350 PE=4 SV=1) HSP 1 Score: 257 bits (657), Expect = 2.51e-86 Identity = 123/140 (87.86%), Postives = 130/140 (92.86%), Query Frame = 0
BLAST of Csor.00g119850 vs. TAIR 10
Match: AT2G41430.1 (dehydration-induced protein (ERD15) ) HSP 1 Score: 76.6 bits (187), Expect = 1.7e-14 Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of Csor.00g119850 vs. TAIR 10
Match: AT2G41430.4 (dehydration-induced protein (ERD15) ) HSP 1 Score: 76.6 bits (187), Expect = 1.7e-14 Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of Csor.00g119850 vs. TAIR 10
Match: AT2G41430.2 (dehydration-induced protein (ERD15) ) HSP 1 Score: 76.6 bits (187), Expect = 1.7e-14 Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of Csor.00g119850 vs. TAIR 10
Match: AT2G41430.5 (dehydration-induced protein (ERD15) ) HSP 1 Score: 76.6 bits (187), Expect = 1.7e-14 Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of Csor.00g119850 vs. TAIR 10
Match: AT2G41430.3 (dehydration-induced protein (ERD15) ) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-11 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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