Csor.00g119820 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCCTCCGTTACGCTTCGATCCTTTCACTGTAAGTCGTTCTCTCTTTCTCCCTATCAATGTCCTTGTATGTAATTTTCGTTCGTTCCAGTTGTCTGGTTGCTTTGTGCAGTGATTTAGACTTTTATTGACTGTCGCGAGCTTTTCCTCCTTTTCTGTAATGTTAATTTGAAAGCTGATTATTGTATGTTTGATGTTGATTTGAGTATAATTGCAATGTTGATTTACGAGTGAGCCGAGCTCCTCCAACGGTGAAGTTTCATTTTAGAAATGGAGTATAGTGTAGCATTTCCAGATCTAGTGTTCGATTTGTTTGATTGTTTAGTTATTTTGAGATATGATAATCGACGGCGTAGGATTTTCTTCAGTCATTGCATGTAATTCTTTGTGTTGTGAAAGAAATCCTTTATGATTAGTTAAAGAAGAGGATATGCCTCTCTTGAATTCTCTTTAGGTCTTGGTATGGTCGCAGGCAGCATACCTTATTTAGCAATTTAGTTTTGTGGATTTAGAGATAGTGGTTTGCTTTCGGCCTTTGGTTATCAGTAGCCTGATAATGAAAATTGTGAAGAAAAGGTTCGATATCGCATTTTAAAGAGGTTCTTGAGATTCTAACATTTTTACGCTTCCTTGTTTTGTTTTATTTTTTTAAAAAACAAACCGTTCAAAATTGATTGCCGCGCTTATTGTCACCATCTGTTTCCAGGATACATAACGTAGAGATAAACTTCGTTGTATCTCCGGAATTACATCAAACTTCTATTCTTCTTCTTTAGTTTTCAAGATTTTTCACTTTATTTGTCACAGATTAGCTTAAGTAATCGCTCACCACGAGAATCTAAAATGTGTATATTATTCTGTGTGATTTCAGATTTTGCAGGTGGTTCACGTCTGCAGTTAATTGAGAAACCAAGTAAAATTTCTGTGTGTAATATTAAAAAGTCGTGCATTCAAGGACTATCAGTTTTTGGCAAGCCAATCTATATTCCAACAAACCAGAAGCGAACGGTGGTATTGTGCACAAAGACGCCAGACGTTTCTGAAACTGCTAAACCCAATGGTAAGCTTTATTGTCCTTGAAGTTTCAGTATGGTTGTGTCCTGTGATTAATGTCCGTTCTTCCTCTGACTGTACATGCGTTAGCTGTTCTTATCCATTACAGTAGCAAGTGTTCCTGCAAATATTATGCTTTTTTAATGCTAGCTATTGATGTCGTAATTTGTTTGATCGTTATGCATCATCTTTTTTAATTTATAAATTCATTCGTCTAGACTCGGTTGGGTAAAATAATGACCATATTTCTATTGCATTAAGAAGAAAGGTAGATGTATAATCTGGTTTTAAGGACACGTATCAGAAAGAAATTCAAGTCATGCTGTCTCCCAAATCCAACTCTCCCTGCCAAGCCTTGTTTCTTACTTCCCTTTTTGTGCAGGAATTCTCTCTCAGCCCCAAAATGATTCCTTATTCTAGGGCTATCGGTCCCCATTCTAAGCAACCCATGCAGAAAATTTAAAATTCCCCTTAGTTGATGTGGCATTACCAAATGATTAAAATTCCCCTATCAAAGATGTCTTAATTATGCACGAGTAGTGCATGTGTTTCATCTGTGTTGAGCTATTTTGGTTTCTTAGTTGTAACTTTACTATTATATTTCTCTTCAAACTATCATTATTAATCGTTCTATACATTTTCCACTGAAAATATGGATAGGCATTGATTGAACTATCCAGTCACATTCGTTATTGGCTTTTATACCTTCTACTTGTTACTGACAGATAGTGTACTCCGACGTTCAGCGCAGAAAAATCCTGCAGCGAATGCAACTTTTCCTGATGGACTTGAAGTGAGTTCAAACTTAATCTTCTGTTTCTGTTTGTTTCCTCATGAAAAGAAGGCACTTTTCATTGGGCATCCCTCTTCATTAGTAAACATTACAACTTCATCTGAAACTTCTTTTTTCGTGAAAGTTACTGAAATTCACATGTTATGAGCTTCTCCTTCATGGTTTATATACGCATATTATAGACCTTGCAATATGGTACAGAATTAGAGTGCATAGCCACCTGCTGAAACATAATGGGCCTTGGAATTATTCTCAATGTTTTCAGAGAAATGTTTTCTTCTTTTACTTGTGAGTGTATTTGTCAGTGCTTTGCAAAGGACAACCGTAGGCTGTGTAAAATCTAGAAGGCCTAACACCGGAACATTCACCATGGCCTAATTCAATGTTTCAAAAGCCCGTTGTGCTCCTCATTCCAGCCAAAAATATTTTTCAACAACTGTTGTTAAATGCGACAGTACTATGGTTGGCCACAAACTTTCGGTAGTATCCAGTTAGATCGAGAAACCCCTTGTCTTCATTGTTTTTGGAGAATCTAGTCCAACAAAGGAGAACTCAAAGATAAATCTACCTCTGTCGACTTCATATCCAGAATTTCCAAGGTGCCGGCATCTCTTCCTCCAAAATATCTGCACCAGCCAATTTTTCATTGAAGTCTGTCTCCTCTCTTCATCAAGATTGATGCACCATCACTTGAAGCTATTTTTTCTTACTATGACGGGAATAATTTTCTTCACACTTCGAAATATTTACATCACTTGTATTCATATTTTTGCCTCAGGTCCTGATTAATCTCAACCAACAAGAAAAAAAAAAGTGTTTATCTTTTTAAAATGAAATGTAAATCCTCAGTTTCACGCGTAAATTTTCTTACTCAAATATTTTCGTCACTTGGGCCTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTTATACACGTTAGTGACTTGGGGTTGTCAAGTTTCACCAACACTCCCATGAAGTTCTTTGTTTGTTTGTTTTTTTTGGGTTCAAATGAAAGTTGATTAATTGTAATGTTTTCTTTGGATATTTCATTCTATCCTTGTGAATTTAACTAACTTATCTACTCTTTGAAATCACCAGGCATTGGTGCTGGAGGTCTGTGATGAAACCGAGATTGCTGAACTAAAACTAAAGGTGTATTGAAACTCCAATTTTGTACAATGTTTCTTTTTTATTTGAACAGCCACGTGAATAGTTTTTTCAGATTATTCTTCACGTAATATCATGATTTTCATGAGAATGAAAGGAACACTGTACGAGAGACTCTTATATATTATATTGATATACATCACATGGTTGTTCAACCAACGAAAAAATTCTTGATTTTGCGGTTGTTTGAATCACTTTGCTTAGCCTTGGACTAAGTTTCAGGGACATAAAGTTGTAGGTGAGTCAATTTATACATGTATTGACTAACCTTCTGCTATCTACTACAGGTTGGAGAGTTTGAAATGCATTTGAAGCGGAATCTTGGAGTCGTAAAAGCTCCTCTGTCTGCCATTTCTCCAACAGTACCTCCGCCGATTCCTTCTGAACCCATGGTTGAGTCAGCTGCTACTGCACCAGAACCTCTGAAACCTTCTCCAGAGAAAACAACTCCTTTTACCAATGTTCCCGTGGAGAAGTCGTTGAAGCTAGCAGCTTTGGAGGCATCTGGAACAAAAGGATATGTTCTGGTTTCTTCTCCTACGGTATGTGATGCATTAATGTGTAAGGTTCTGTGTAATCTAAAAAGAAAGAACTGCAAAATCTGAGAAATCCTATTAATTATAACTTGGCTCTTGCTTTTTTCATTAGGTTGGATCATTCCTAACGGGCAGGACAATAAAAGGAAAAAAGCAGCCTCCGATCTGCAAAGAGGTATTGCTTTCAAGCCTGCTTATCTTCAATGACATTTTAACTTTCAAACTGTTGAATTACGGGAAGACGATCTCGTGACTTTAATTGGAAAACCTTGGATATTCCGGATCGAATAATAAGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTGCTTGTTCAGTTCTTTAGATTAACTGGAACACAACCCGGCCCATTAAACTATGGACTACCAGGCCCATTAATGATCTAACTAACCTCAGTCATCTTAACATGTTTACGACTTTTCAGAACCTTATTTTCCAATTTTAGTTTTACATTTGTGTCAAATTTTAGCAAACCACATTAGTTTATGAATTGGCGGCTTCTTTCATGCACAGAAAGATGTAATAAAGGAAGGACAAGTAATTGGATACGTCGATCAGTTTGGCACCGAACTTCCTGTAAAGGTACATATGAACCTTTCAATGCAATATTTTTGTGCGAGACCTCCATAACATCCTTTGATGGTAATGCTAATTTTTATCCTCAATTCATTGTTGAGCAGTCAAATGTGGATGGAGAAGTATTGAGGGTTCTCTTCAAGGAAGGAGGTACGTACGATATTCTGTCTATTCAGACTATTAAGAAAGTGTTACAAGATGTCTCAAAATTGAAAATCAGTTGGTTTGATACTCTTATCTTTAGAAAATGTGGAAGTGCAAAATCTTACTATATTTATGGCGTTCCTCAGAAGTCTTTAACTAGTTCAACCTGAAGTTTTTGAGAGGTCCTACTAATTTTATTAATGGTTTGCAGAAGCTGTTGGCTATGGCGACCCCCTGATTGCTGTCTTGCCAGCGTTCCATGGAATCAGGTGA ATGGAGTCCTCCGTTACGCTTCGATCCTTTCACTATTTTGCAGGTGGTTCACGTCTGCAGTTAATTGAGAAACCAAGTAAAATTTCTGTGTGTAATATTAAAAAGTCGTGCATTCAAGGACTATCAGTTTTTGGCAAGCCAATCTATATTCCAACAAACCAGAAGCGAACGGTGGTATTGTGCACAAAGACGCCAGACGTTTCTGAAACTGCTAAACCCAATGATAGTGTACTCCGACGTTCAGCGCAGAAAAATCCTGCAGCGAATGCAACTTTTCCTGATGGACTTGAAGCATTGGTGCTGGAGGTCTGTGATGAAACCGAGATTGCTGAACTAAAACTAAAGGTTGGAGAGTTTGAAATGCATTTGAAGCGGAATCTTGGAGTCGTAAAAGCTCCTCTGTCTGCCATTTCTCCAACAGTACCTCCGCCGATTCCTTCTGAACCCATGGTTGAGTCAGCTGCTACTGCACCAGAACCTCTGAAACCTTCTCCAGAGAAAACAACTCCTTTTACCAATGTTCCCGTGGAGAAGTCGTTGAAGCTAGCAGCTTTGGAGGCATCTGGAACAAAAGGATATGTTCTGGTTTCTTCTCCTACGGTTGGATCATTCCTAACGGGCAGGACAATAAAAGGAAAAAAGCAGCCTCCGATCTGCAAAGAGAAAGATGTAATAAAGGAAGGACAAGTAATTGGATACGTCGATCAGTTTGGCACCGAACTTCCTGTAAAGTCAAATGTGGATGGAGAAGTATTGAGGGTTCTCTTCAAGGAAGGAGAAGCTGTTGGCTATGGCGACCCCCTGATTGCTGTCTTGCCAGCGTTCCATGGAATCAGGTGA ATGGAGTCCTCCGTTACGCTTCGATCCTTTCACTATTTTGCAGGTGGTTCACGTCTGCAGTTAATTGAGAAACCAAGTAAAATTTCTGTGTGTAATATTAAAAAGTCGTGCATTCAAGGACTATCAGTTTTTGGCAAGCCAATCTATATTCCAACAAACCAGAAGCGAACGGTGGTATTGTGCACAAAGACGCCAGACGTTTCTGAAACTGCTAAACCCAATGATAGTGTACTCCGACGTTCAGCGCAGAAAAATCCTGCAGCGAATGCAACTTTTCCTGATGGACTTGAAGCATTGGTGCTGGAGGTCTGTGATGAAACCGAGATTGCTGAACTAAAACTAAAGGTTGGAGAGTTTGAAATGCATTTGAAGCGGAATCTTGGAGTCGTAAAAGCTCCTCTGTCTGCCATTTCTCCAACAGTACCTCCGCCGATTCCTTCTGAACCCATGGTTGAGTCAGCTGCTACTGCACCAGAACCTCTGAAACCTTCTCCAGAGAAAACAACTCCTTTTACCAATGTTCCCGTGGAGAAGTCGTTGAAGCTAGCAGCTTTGGAGGCATCTGGAACAAAAGGATATGTTCTGGTTTCTTCTCCTACGGTTGGATCATTCCTAACGGGCAGGACAATAAAAGGAAAAAAGCAGCCTCCGATCTGCAAAGAGAAAGATGTAATAAAGGAAGGACAAGTAATTGGATACGTCGATCAGTTTGGCACCGAACTTCCTGTAAAGTCAAATGTGGATGGAGAAGTATTGAGGGTTCTCTTCAAGGAAGGAGAAGCTGTTGGCTATGGCGACCCCCTGATTGCTGTCTTGCCAGCGTTCCATGGAATCAGGTGA MESSVTLRSFHYFAGGSRLQLIEKPSKISVCNIKKSCIQGLSVFGKPIYIPTNQKRTVVLCTKTPDVSETAKPNDSVLRRSAQKNPAANATFPDGLEALVLEVCDETEIAELKLKVGEFEMHLKRNLGVVKAPLSAISPTVPPPIPSEPMVESAATAPEPLKPSPEKTTPFTNVPVEKSLKLAALEASGTKGYVLVSSPTVGSFLTGRTIKGKKQPPICKEKDVIKEGQVIGYVDQFGTELPVKSNVDGEVLRVLFKEGEAVGYGDPLIAVLPAFHGIR Homology
BLAST of Csor.00g119820 vs. ExPASy Swiss-Prot
Match: Q58628 (Pyruvate carboxylase subunit B OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=pycB PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 9.1e-04 Identity = 21/52 (40.38%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of Csor.00g119820 vs. NCBI nr
Match: KAG6602605.1 (hypothetical protein SDJN03_07838, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 549 bits (1414), Expect = 8.01e-197 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g119820 vs. NCBI nr
Match: KAG7033285.1 (accB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 546 bits (1406), Expect = 1.33e-195 Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 0
BLAST of Csor.00g119820 vs. NCBI nr
Match: XP_022922951.1 (uncharacterized protein LOC111430775 [Cucurbita moschata]) HSP 1 Score: 545 bits (1405), Expect = 1.89e-195 Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 0
BLAST of Csor.00g119820 vs. NCBI nr
Match: XP_023535834.1 (uncharacterized protein LOC111797142 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 540 bits (1390), Expect = 3.65e-193 Identity = 275/279 (98.57%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g119820 vs. NCBI nr
Match: XP_022990878.1 (uncharacterized protein LOC111487634 [Cucurbita maxima]) HSP 1 Score: 528 bits (1361), Expect = 9.62e-189 Identity = 269/279 (96.42%), Postives = 271/279 (97.13%), Query Frame = 0
BLAST of Csor.00g119820 vs. ExPASy TrEMBL
Match: A0A6J1E5I5 (uncharacterized protein LOC111430775 OS=Cucurbita moschata OX=3662 GN=LOC111430775 PE=4 SV=1) HSP 1 Score: 545 bits (1405), Expect = 9.14e-196 Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 0
BLAST of Csor.00g119820 vs. ExPASy TrEMBL
Match: A0A6J1JUK7 (uncharacterized protein LOC111487634 OS=Cucurbita maxima OX=3661 GN=LOC111487634 PE=4 SV=1) HSP 1 Score: 528 bits (1361), Expect = 4.66e-189 Identity = 269/279 (96.42%), Postives = 271/279 (97.13%), Query Frame = 0
BLAST of Csor.00g119820 vs. ExPASy TrEMBL
Match: A0A6J1C1S0 (uncharacterized protein LOC111006634 OS=Momordica charantia OX=3673 GN=LOC111006634 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 1.31e-163 Identity = 229/279 (82.08%), Postives = 253/279 (90.68%), Query Frame = 0
BLAST of Csor.00g119820 vs. ExPASy TrEMBL
Match: A0A6J1K337 (uncharacterized protein LOC111489625 OS=Cucurbita maxima OX=3661 GN=LOC111489625 PE=4 SV=1) HSP 1 Score: 454 bits (1169), Expect = 8.70e-160 Identity = 230/279 (82.44%), Postives = 250/279 (89.61%), Query Frame = 0
BLAST of Csor.00g119820 vs. ExPASy TrEMBL
Match: A0A6J1FI89 (uncharacterized protein LOC111445655 OS=Cucurbita moschata OX=3662 GN=LOC111445655 PE=4 SV=1) HSP 1 Score: 450 bits (1158), Expect = 4.12e-158 Identity = 227/279 (81.36%), Postives = 248/279 (88.89%), Query Frame = 0
BLAST of Csor.00g119820 vs. TAIR 10
Match: AT3G56130.1 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 229.2 bits (583), Expect = 4.1e-60 Identity = 128/227 (56.39%), Postives = 155/227 (68.28%), Query Frame = 0
BLAST of Csor.00g119820 vs. TAIR 10
Match: AT3G56130.2 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58 Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 0
BLAST of Csor.00g119820 vs. TAIR 10
Match: AT3G56130.4 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 215.3 bits (547), Expect = 6.2e-56 Identity = 124/227 (54.63%), Postives = 149/227 (65.64%), Query Frame = 0
BLAST of Csor.00g119820 vs. TAIR 10
Match: AT3G56130.3 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 198.0 bits (502), Expect = 1.0e-50 Identity = 105/168 (62.50%), Postives = 127/168 (75.60%), Query Frame = 0
BLAST of Csor.00g119820 vs. TAIR 10
Match: AT3G15690.2 (Single hybrid motif superfamily protein ) HSP 1 Score: 136.3 bits (342), Expect = 3.6e-32 Identity = 86/227 (37.89%), Postives = 129/227 (56.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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