Csor.00g119690 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g119690
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA replication complex GINS protein PSF3-like
Location	Csor_Chr04: 20580886 .. 20583198 (-)
RNA-Seq Expression	Csor.00g119690
Synteny	Csor.00g119690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAATTATTATGATATTGATGACATTCTGGCGGATGAAGAGGTCAATATCTTATTCTTTTACTTGATAAGATTTTATAAACTCGCAATCTCAATATTGAATCTTGTTTTGTGCGCTTGACAGCTTGTCTCAGTTATGTTCCAAAAGGCAGTTAATGGAGTTGCCATCGATCCCAGTTCTGAAACAGATTCTGTGAGTTGGATTAGTAGGAGACAGGTTATGGAAGATGAATGACAAACTTATGTTTTCTTTTCTGGTGCAATTTCAGGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTGCCTGCTTGTTTTAACCAAAGGTAGCAATCGCTATTATACTCAGGCTTTTTATATGACCAAGAATTTCCCTGAACTTTTATTGTCTAGACTTTTGGGAAGCTTAAGAGAATGAGGATCTTCCTTACTACACCCCGACTTACTCTCTAAAAACCTGACCTGCAAAGACACTGAATTCTGATTCTTTTTCTTCTAACTTTGTGGTTGCAGAATTCATGCTTGATCGACTTAATTTCTTTTCATCTGCTTATTGTTTTATGAGCAGAAAGTTCTGAATTGGAATCTTAAGAGTACAGGAATTAGTCAAATTTAATGAGATCATTTTAAAGTTGTTGGTGTTATTATTTTGAATTTAAGAACTTCCCCTCTAAGCGCTCATAAATTGTATTTTGAATTGGTGTTATTATTTTCAATCAACTGTGCATGATCTATTATATGGCATGAAATTGTAGTATTCCAAAACCTTTTGAGATTTGGTTTATAGAATCTCGTTACTTGCTCCGTTGAAGCTGACTCACAAAGAAAATTATTTTTTTTTTTCCCTTTGTGTAGTATTCTGAGCCTGTGTGTGCTCAATCTTTTCATGTGCTAACTAATTTATTACTAGCAGAGACTTCCTACCCTAGAATTTCATGATCAAAGGAATCATCGAGACTTTGAAGATGATATCTGTTCTTATATATATATATATATATAAAGATGATGGTATTTGTAGTTGACTAGTGCTTTTTTTCTCTAAGCAGAACGCGACTTGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGAAGTCAATACTTCTATGAATTTGGATGCAAAATTGCACCATTGTGAGTATCTTGAGATCCAACTCTGTGTGCATCAGATTTTTTGTTTTTTTTTTCTTTTAAATATCCATATGAATCCATACTTGAATTTCATAGGATATTGAATCTTAGATAGGTGGCACTATGAATTTATCATAATTATTTTGAGGAGAAAATTTACATTGCTGTTTTTTCATTATTTTAGCTGAAGTCTTACTTTATATCTACTGGATAGTGAAAGCTTGTCAGGGCACTTTCATTTGACATACATTTGTACTAAAATAAGCATTGTTTGTTTTCACCTTTGACAGAACTACCATTCTGAAGGTATGACATTTAACAGATCCTTCTTTTAACGTAATAATTAGGATATCTAGTCACAAGACTTCTTTTTTACTGCCGTCTAAATGACATATCAAACGATCAATTTAAGCTTGTAAGCATGTCGATTGGACATCCTATCAATGACTAAGGATCTTAACGTTAGGCTTGAACTCTTGGGAGTATTTTATAATAATCTGTCTAGCATGTTGTCATCTCAAGTTCTGCATCTCGATGAATATTAATATCATTTTCATTCCATTGGTAGATGTAGACTGATAAATATGCATAAAGCTTTAAAACTGACTAGCTAGCCCACTCTACATATGAAGTGTATCTTGTAAAAAGTGCTTGTTGCCTTGATCTCGTGCATTTCTGATGTCTACCATATCTCGCTGTTAGCAATATTTTTGAAGTGTACCTAAATGGACGAGAACGCTATAGATAGAGTGCTATTTCTCATTTTTGTTTCACAAACTTCAATGTCAGGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTTTGACCAAGGCTCACACTGCAGTGTTTGCTGCAAGTTCAAAATACTTGACACTTCTATCAAAGGAAGAAACTAAAAGTGAGATTTTTGTTGCATGTTTTGTCTGTCCTCTGTTTTCATATTTGGTGCTTCTCTTCAAACTCACGTCTCAATATAATCATTGTATGCAGTGTATGAGGCAGCCCAGTCCTCTATGACAGCCTTTAAGAAATGGCGAATCGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAGAGGAAGTCTTCTGAGTAG

mRNA sequence

ATGACAAATTATTATGATATTGATGACATTCTGGCGGATGAAGAGCTTGTCTCAGTTATGTTCCAAAAGGCAGTTAATGGAGTTGCCATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTGCCTGCTTGTTTTAACCAAAGAACGCGACTTGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGAAGTCAATACTTCTATGAATTTGGATGCAAAATTGCACCATTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTTTGACCAAGGCTCACACTGCAGTGTTTGCTGCAAGTTCAAAATACTTGACACTTCTATCAAAGGAAGAAACTAAAATGTATGAGGCAGCCCAGTCCTCTATGACAGCCTTTAAGAAATGGCGAATCGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAGAGGAAGTCTTCTGAGTAG

Coding sequence (CDS)

ATGACAAATTATTATGATATTGATGACATTCTGGCGGATGAAGAGCTTGTCTCAGTTATGTTCCAAAAGGCAGTTAATGGAGTTGCCATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCAAAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTGCCTGCTTGTTTTAACCAAAGAACGCGACTTGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGAAGTCAATACTTCTATGAATTTGGATGCAAAATTGCACCATTGGTTGGTGATAGAACAATCGGTTCTTGGCTTTTATCCACGTTCAAAAGTAGGTACAAGGAAGTTTTGACCAAGGCTCACACTGCAGTGTTTGCTGCAAGTTCAAAATACTTGACACTTCTATCAAAGGAAGAAACTAAAATGTATGAGGCAGCCCAGTCCTCTATGACAGCCTTTAAGAAATGGCGAATCGGTGGGCCTAGATTTCAGAAAGCATCCTTTCTTGGGAGGAAGAGGAAGTCTTCTGAGTAG

Protein sequence

MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRKRKSSE

Homology

[Close]

BLAST of Csor.00g119690 vs. ExPASy Swiss-Prot
Match: Q7ZT01 (DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.4e-14
Identity = 54/191 (28.27%), Postives = 91/191 (47.64%), Query Frame = 0


Query: 3   NYYDIDDILADEELVSVMFQKAVNGVA-IDPSSETDSVESGSKVELPFWLAKELH--LRQ 62
           N+  ++D+L  +E +    +     +  +D   ++DS+  GSK+ELP WLAK L+   R+
Sbjct: 17  NFLSLEDLLMSQEKLPCCIESGFPRLGFLDKGGDSDSIPEGSKMELPLWLAKGLYDNKRR 76

Query: 63  VAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRT--IGSWLLSTF 122
           V  + LP  + +  R    ADA  VDL     ++Y FG ++          I   +L TF
Sbjct: 77  VLSVELPKIYREGWRTVFSADANVVDLHKMGPHYYGFGSQLLNFDSPENPEIAKTILQTF 136

Query: 123 KSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFL 182
             R++ ++  +  A    +S  +  L + E  ++ A Q  + AF+ W  G      AS L
Sbjct: 137 VGRFRRIMDSSQNAYNEDTSGLVARLDELERSLFRAGQRGLNAFQSWERGKAAQITASNL 196

Query: 183 ---GRKRKSSE 186
               +KRK +E
Sbjct: 197 VQNYKKRKFNE 207

[Close]

BLAST of Csor.00g119690 vs. ExPASy Swiss-Prot
Match: Q4WQ54 (DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=psf3 PE=3 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 44/170 (25.88%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 3   NYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHL----- 62
           +YYD+D IL D + +   F+  V G+ I   +  + +++G++++LP WL   L +     
Sbjct: 2   SYYDVDSILTDSQKLPCTFELEVPGLGILEGNPGEDIKAGTRIDLPLWLGVMLSIGARLG 61

Query: 63  -RQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLST 122
             ++  + LP+  + R    ++AD   VDLRS + +FY    ++  L  +  +   L++T
Sbjct: 62  TSRLVTLDLPSALSDRVVNALKADPRTVDLRSLAPHFYSLSERVLDLFEEEEMVDVLINT 121

Query: 123 FKSRYKEVLTKAHT--AVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKW 165
           FK R  E+   AH         + +L  L + E +++  A  S    + W
Sbjct: 122 FKKRAAEIADHAHNPKGALGEGADFLRGLDETERQLFRVAHDSARETRIW 171

[Close]

BLAST of Csor.00g119690 vs. ExPASy Swiss-Prot
Match: Q9BRX5 (DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 50/175 (28.57%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 3   NYYDIDDILADEELVSVMFQKAVNGVAI-----DPSSETD-SVESGSKVELPFWLAKEL- 62
           N+  +DDIL   E + V  + A+  +          +ETD +V  GSK+ELP WLAK L 
Sbjct: 18  NFLSLDDILMSHEKLPVRTETAMPRLGAFFLERSAGAETDNAVPQGSKLELPLWLAKGLF 77

Query: 63  -HLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVG--DRTIGSW 122
            + R++  + LP  + +  R    AD   VDL     +FY FG ++       +  I   
Sbjct: 78  DNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQS 137

Query: 123 LLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIG 168
           LL TF  R++ ++  +  A    +S  +  L + E  +++  Q  +  F+ W  G
Sbjct: 138 LLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQTGQKGLNDFQCWEKG 192

[Close]

BLAST of Csor.00g119690 vs. ExPASy Swiss-Prot
Match: Q5RDV0 (DNA replication complex GINS protein PSF3 OS=Pongo abelii OX=9601 GN=GINS3 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 50/175 (28.57%), Postives = 83/175 (47.43%), Query Frame = 0


Query: 3   NYYDIDDILADEELVSVMFQKAVNGVAI-----DPSSETD-SVESGSKVELPFWLAKEL- 62
           N+  +DDIL   E + V  + A+  +          +ETD +V  GSK+ELP WLAK L 
Sbjct: 18  NFLSLDDILMSHEKLPVRTETAMPRLGAFFLERSAGAETDNAVPQGSKLELPLWLAKGLF 77

Query: 63  -HLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVG--DRTIGSW 122
            + R++  + LP  + +  R    AD   VDL     +FY FG ++       +  I   
Sbjct: 78  DNKRRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQS 137

Query: 123 LLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIG 168
           LL TF  R++ ++  +  A    +S  +  L + E  +++  Q+ +  F+ W  G
Sbjct: 138 LLQTFIGRFRRIMDSSQNAYNEDTSALVARLDEMERGLFQIGQNGLNDFQCWEKG 192

[Close]

BLAST of Csor.00g119690 vs. ExPASy Swiss-Prot
Match: Q5AFK3 (DNA replication complex GINS protein PSF3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PSF3 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 45/173 (26.01%), Postives = 83/173 (47.98%), Query Frame = 0


Query: 2   TNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQVA 61
           T+YYD+DDILAD E ++  F   V G+     +    +   +K+ELP WL+    L  VA
Sbjct: 3   TDYYDLDDILADSEKLTCKFNITVPGLGYLEGNPGKPIHEDTKLELPHWLSG--ILATVA 62

Query: 62  V----------MGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGS 121
           +          +  P    ++    I+ D   VDL   + Y+Y    K   L  D+T+ +
Sbjct: 63  IDEDSNINFLDLADPDIIKEKVINAIKTDPLAVDLHKLTPYYYSLILKWGNLYTDKTLIA 122

Query: 122 WLLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKW 165
            +++  K+R  E+   ++ A    ++++L  L + E  ++++   S  + +KW
Sbjct: 123 NVMNCLKARSLEIYNFSNNANKTLNNEFLYTLDEFERALFKSTSDSNKSMRKW 173

[Close]

BLAST of Csor.00g119690 vs. NCBI nr
Match: KAG6602618.1 (hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365 bits (936), Expect = 4.39e-127
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 185
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Csor.00g119690 vs. NCBI nr
Match: XP_022962205.1 (DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962214.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_022962222.1 DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_023549787.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo] >XP_023549796.1 DNA replication complex GINS protein PSF3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (932), Expect = 1.79e-126
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILA+EELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 185
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Csor.00g119690 vs. NCBI nr
Match: XP_022990174.1 (DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990176.1 DNA replication complex GINS protein PSF3-like [Cucurbita maxima])

HSP 1 Score: 362 bits (929), Expect = 5.13e-126
Identity = 183/185 (98.92%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILA+EELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAHTAVFAASSKYLT+LSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 185
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Csor.00g119690 vs. NCBI nr
Match: KAG7033298.1 (PSF3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357 bits (917), Expect = 4.60e-124
Identity = 185/193 (95.85%), Postives = 185/193 (95.85%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSV--------ESGSKVELPFWLA 60
           MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSV        ESGSKVELPFWLA
Sbjct: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVSWISRRQVESGSKVELPFWLA 60

Query: 61  KELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSW 120
           KELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSW
Sbjct: 61  KELHLRQVAVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSW 120

Query: 121 LLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQ 180
           LLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQ
Sbjct: 121 LLSTFKSRYKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQ 180

Query: 181 KASFLGRKRKSSE 185
           KASFLGRKRKSSE
Sbjct: 181 KASFLGRKRKSSE 193

[Close]

BLAST of Csor.00g119690 vs. NCBI nr
Match: XP_038885801.1 (DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802.1 DNA replication complex GINS protein PSF3-like [Benincasa hispida])

HSP 1 Score: 341 bits (875), Expect = 1.01e-117
Identity = 171/185 (92.43%), Postives = 179/185 (96.76%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYD+DDILA+EELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 5   MTSYYDLDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 64

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSR  +FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 65  AVMALPSCFNQRTRLEIQADAAFVDLRSRCPFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 124

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAHTAVFAASSKYLTLLS EETKMYEAAQSSMTAFKKWR+GGPRFQKASFL RK
Sbjct: 125 YKEVLTKAHTAVFAASSKYLTLLSNEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLSRK 184

Query: 181 RKSSE 185
           RKSSE
Sbjct: 185 RKSSE 189

[Close]

BLAST of Csor.00g119690 vs. ExPASy TrEMBL
Match: A0A6J1HEE0 (DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462725 PE=3 SV=1)

HSP 1 Score: 363 bits (932), Expect = 8.67e-127
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILA+EELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 185
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Csor.00g119690 vs. ExPASy TrEMBL
Match: A0A6J1JM79 (DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LOC111487145 PE=3 SV=1)

HSP 1 Score: 362 bits (929), Expect = 2.48e-126
Identity = 183/185 (98.92%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILA+EELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAHTAVFAASSKYLT+LSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHTAVFAASSKYLTVLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180

Query: 181 RKSSE 185
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Csor.00g119690 vs. ExPASy TrEMBL
Match: A0A1S3B3H3 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103485572 PE=3 SV=1)

HSP 1 Score: 340 bits (873), Expect = 8.59e-118
Identity = 170/185 (91.89%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYDIDDILA+EELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 1   MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSR Q+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 61  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAH+AVFAASSKYL LLSKEETKMYEAAQSSMTAFKKWR+GGPRFQ+ASFL RK
Sbjct: 121 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 180

Query: 181 RKSSE 185
           RKS+E
Sbjct: 181 RKSTE 185

[Close]

BLAST of Csor.00g119690 vs. ExPASy TrEMBL
Match: A0A5A7UGU7 (DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002360 PE=3 SV=1)

HSP 1 Score: 340 bits (873), Expect = 1.86e-117
Identity = 170/185 (91.89%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MT+YYDIDDILA+EELVSV+FQKAVNGV IDPSSETDSVESGSKVELPFWLA+ELHLRQV
Sbjct: 23  MTSYYDIDDILAEEELVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQV 82

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
           AVM LP+CFNQRTRLEIQADAAFVDLRSR Q+FYEFGCKIAPLVGDRTIGSWLLSTFKSR
Sbjct: 83  AVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSR 142

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAH+AVFAASSKYL LLSKEETKMYEAAQSSMTAFKKWR+GGPRFQ+ASFL RK
Sbjct: 143 YKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRK 202

Query: 181 RKSSE 185
           RKS+E
Sbjct: 203 RKSTE 207

[Close]

BLAST of Csor.00g119690 vs. ExPASy TrEMBL
Match: A0A6J1BYI2 (DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN=LOC111006426 PE=3 SV=1)

HSP 1 Score: 339 bits (870), Expect = 2.46e-117
Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           MTNYYDIDDILA+EELVSV+FQK VNGV IDPSSETDSVESGSKVELPFWL +ELHLRQV
Sbjct: 1   MTNYYDIDDILAEEELVSVVFQKGVNGVGIDPSSETDSVESGSKVELPFWLGQELHLRQV 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             MGLPACFNQRTRLEIQADAAFVDLRSR  YFYEFGCKIAPLVGDRTIGSWLLSTFK R
Sbjct: 61  VAMGLPACFNQRTRLEIQADAAFVDLRSRCPYFYEFGCKIAPLVGDRTIGSWLLSTFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKEVLTKAH+A+FAASSKYL LLSKEET+MYEAAQSSMTAFKKWR+GGPRFQKASFLGRK
Sbjct: 121 YKEVLTKAHSAIFAASSKYLALLSKEETEMYEAAQSSMTAFKKWRMGGPRFQKASFLGRK 180

Query: 181 RKSSE 185
           RKSSE
Sbjct: 181 RKSSE 185

[Close]

BLAST of Csor.00g119690 vs. TAIR 10
Match: AT1G19080.1 (GINS complex protein )

HSP 1 Score: 257.3 bits (656), Expect = 9.4e-69
Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           M  Y+DIDDIL +EE V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSR  YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKE LTK +TA    +SKYL+ L+KEET +YEAA  SMTAFKKWR GGPRFQ+AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

[Close]

BLAST of Csor.00g119690 vs. TAIR 10
Match: AT1G19080.2 (GINS complex protein )

HSP 1 Score: 257.3 bits (656), Expect = 9.4e-69
Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           M  Y+DIDDIL +EE V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSR  YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKE LTK +TA    +SKYL+ L+KEET +YEAA  SMTAFKKWR GGPRFQ+AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

[Close]

BLAST of Csor.00g119690 vs. TAIR 10
Match: AT3G55490.1 (GINS complex protein )

HSP 1 Score: 257.3 bits (656), Expect = 9.4e-69
Identity = 126/184 (68.48%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 1   MTNYYDIDDILADEELVSVMFQKAVNGVAIDPSSETDSVESGSKVELPFWLAKELHLRQV 60
           M  Y+DIDDIL +EE V V+F K  NGV IDPS+ET+  E GSKVELPFWLA ELHLRQ 
Sbjct: 1   MAKYFDIDDILIEEEFVPVLFHKTANGVTIDPSAETNCAEQGSKVELPFWLAHELHLRQA 60

Query: 61  AVMGLPACFNQRTRLEIQADAAFVDLRSRSQYFYEFGCKIAPLVGDRTIGSWLLSTFKSR 120
             + LP CF+Q+TRLE+QADAA+VDLRSR  YFYEFGCKI PLV DRT+G  L + FK R
Sbjct: 61  VTINLPPCFDQKTRLEVQADAAYVDLRSRCPYFYEFGCKIEPLVTDRTLGILLSTAFKIR 120

Query: 121 YKEVLTKAHTAVFAASSKYLTLLSKEETKMYEAAQSSMTAFKKWRIGGPRFQKASFLGRK 180
           YKE LTK +TA    +SKYL+ L+KEET +YEAA  SMTAFKKWR GGPRFQ+AS LGRK
Sbjct: 121 YKEALTKVYTAAHITASKYLSFLTKEETNLYEAAHLSMTAFKKWRTGGPRFQRASILGRK 180

Query: 181 RKSS 185
           RK S
Sbjct: 181 RKDS 184

The following BLAST results are available for this feature:

BLAST of Csor.00g119690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7ZT01	8.4e-14	28.27	DNA replication complex GINS protein PSF3 OS=Xenopus laevis OX=8355 GN=gins3 PE=...	[more]
Q4WQ54	1.4e-13	25.88	DNA replication complex GINS protein psf3 OS=Neosartorya fumigata (strain ATCC M...	[more]
Q9BRX5	1.0e-11	28.57	DNA replication complex GINS protein PSF3 OS=Homo sapiens OX=9606 GN=GINS3 PE=1 ...	[more]
Q5RDV0	1.0e-11	28.57	DNA replication complex GINS protein PSF3 OS=Pongo abelii OX=9601 GN=GINS3 PE=2 ...	[more]
Q5AFK3	1.9e-10	26.01	DNA replication complex GINS protein PSF3 OS=Candida albicans (strain SC5314 / A...	[more]

BLAST of Csor.00g119690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602618.1	4.39e-127	100.00	hypothetical protein SDJN03_07851, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022962205.1	1.79e-126	99.46	DNA replication complex GINS protein PSF3-like [Cucurbita moschata] >XP_02296221...	[more]
XP_022990174.1	5.13e-126	98.92	DNA replication complex GINS protein PSF3-like [Cucurbita maxima] >XP_022990175....	[more]
KAG7033298.1	4.60e-124	95.85	PSF3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038885801.1	1.01e-117	92.43	DNA replication complex GINS protein PSF3-like [Benincasa hispida] >XP_038885802...	[more]

BLAST of Csor.00g119690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEE0	8.67e-127	99.46	DNA replication complex GINS protein PSF3-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JM79	2.48e-126	98.92	DNA replication complex GINS protein PSF3-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3B3H3	8.59e-118	91.89	DNA replication complex GINS protein PSF3-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UGU7	1.86e-117	91.89	DNA replication complex GINS protein PSF3-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1BYI2	2.46e-117	91.35	DNA replication complex GINS protein PSF3-like OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Csor.00g119690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19080.1	9.4e-69	68.48	GINS complex protein	[more]
AT1G19080.2	9.4e-69	68.48	GINS complex protein	[more]
AT3G55490.1	9.4e-69	68.48	GINS complex protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 45..148 e-value: 2.2E-9 score: 37.8
IPR038437	GINS complex, subunit Psf3 superfamily	GENE3D	1.20.58.2050		coord: 1..167 e-value: 1.2E-49 score: 170.4
IPR010492	GINS complex, subunit Psf3	PANTHER	PTHR22768	UNCHARACTERIZED	coord: 1..184
None	No IPR available	CDD	cd11713	GINS_A_psf3	coord: 65..167 e-value: 2.76588E-29 score: 102.344
None	No IPR available	SUPERFAMILY	160059	PriA/YqbF domain	coord: 1..66
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 65..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g119690.m01	Csor.00g119690.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902975	mitotic DNA replication initiation
cellular_component	GO:0000811	GINS complex