Csor.00g118910 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAATGAAGGAGGAGAGGGTGTTGACGGTGGTTGGGTCGACGGAGATTATGCGGGTTTCGCCGCCCATATAGGAGAGGGACTTGGTGCGGGGGCGTGGGGTTATGTGGCCGCCGTAGCTGCACATCAAACGGAGCTTCGTGGGGGCGGCGGTGATGGCGAGTTGTGGCGGGGACTGTGGGTCCATTTGGGTTTGTGAGATCGGTGTAGAGTACGGGAAGATACTTAAAATGTAACAATATTTAAAATAAAAAATAAAAAATTCAAGCCAGTTGACACGTGTAATTTACCCTTAAATTGTTTGTAGATCTCGCCCGCGCCTAACTGTTCATTGCGTTCACATCTTAATTTCATCAAATTCGCAGCCTCCGTCGCCGGTCCATTGGCGGGCTCTTCTTCTTCTGTTTTCGCCATTTCGTTACTGTAAGTTCCACCATATGTACAGTTCTTATTTCTGTTAATCTCCGCTCCAAATCGTAAGCGTAACATTTTTTTTTGTCTTCCTCGTGCCGGCTAACCCAGTGATGCACTGAAAACTCGAAAGAGAGTTATGGCAGCAGCGTCTTTTAAGTGGATACTTCAATTACACAAGGACGTTCCCAGAGCCGCAAGATTCTACTCAGAGGGCTTGGACTTTACTGTTCATGTCTGCACTCTTCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAAGTAATTGCGCTATTTTTTGATTCTCTACGAAATCATTAATCCTTGCATTTTATGTGTTCTGTTGATCTGTTTACACCAAAACGATTGTGCCATAGTTAGGTGTCTTGTATGTGTTTGATGTAGTGCCTGCGAGAAATTAAGAATGAAAAACGGTCAAATACTATAAGTCAAGCGTCGTTTGTAAGTGGTTGTATTCGTATAGAGGTTCATCGGGGCAATGGGTAATGAGCTTGGTATATAAATGGTTCAATTTCATATAATTAATTACAGAAGATATTTGGTCTTAACTCGTAGGTAAGAATGAAACCACGGAGAAATGGTAGGAAGTTCTATTGCTCGGGGAGGATATTGGAAGTTTATGACGAGTACAACTTACATTGTTAACTCGGTTCTTTGCACGTGGATTGATGGACATTTCATGAAAATTTGGTGTTTGTTGAAGGCATTTCTCATGAAGTACTAGTTCTTAAATTGTTTCCCTTTAGAGTCGGCCGTGATTGAGAGGTATTGTAACAGCCTACTCCACCGCTAACAGATATCGTCCTCTTTGAGCTTTCTCTTGTGGGCTTCTCCTCAAGGTTTTAAAACGCGTCCACTAGGGAGAGGTTTCAACACCCTTATAGGGAGAGGTTTCAACACCCTTATAAGGAATGTTTCGATCCCCTCTTCAACCGACGTGGGATCTCACTAGTGTTGAGTGTTTAAATCGCTGCATGGGCTTGCTTTGTCCTTAGCATGAATTATCAAAGCAAGCAAGTTGAGCCGTATTTTGAGATAAATATTTTGTTCCCCTAGTTTGATATAGAAACTTGATGTTTTAATTTCACATATTTAGATGCTTTGGCCTTGATTGGATGCTTTATCTGCTAACTTGGGGTCACAGTGACCATATTGTGCAACAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAGCACGGTAACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTCCAATAAAGTATGAAATACACGGAAAGGTATAAACTCGTCACCCCACTCTCTTGAATCATAAATGATTAAGGCTTTTAAAGCTTCAATTGATTGTTTCAGGTTGCATCCATGCGATGTATTGACGGTCATATGTTGGGCCTTTATGAACCAGCATAA ATGAGAAATGAAGGAGGAGAGGGTGTTGACGGTGGTTGGGTCGACGGAGATTATGCGGGTTTCGCCGCCCATATAGGAGAGGGACTTGGTGCGGGGGCGTGGGGTTATGTGGCCGCCGTAGCTGCACATCAAACGGAGCTTCGTGGGGGCGGCGGTGATGGCGAGTTGTGGCGGGGACTGTGGGTCCATTTGGCCTCCGTCGCCGGTCCATTGGCGGGCTCTTCTTCTTCTGTTTTCGCCATTTCGTTACTTGATGCACTGAAAACTCGAAAGAGAGTTATGGCAGCAGCGTCTTTTAAGTGGATACTTCAATTACACAAGGACGTTCCCAGAGCCGCAAGATTCTACTCAGAGGGCTTGGACTTTACTGTTCATGTCTGCACTCTTCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAATGACCATATTGTGCAACAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAGCACGGTAACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTCCAATAAAGTATGAAATACACGGAAAGGTTGCATCCATGCGATGTATTGACGGTCATATGTTGGGCCTTTATGAACCAGCATAA ATGAGAAATGAAGGAGGAGAGGGTGTTGACGGTGGTTGGGTCGACGGAGATTATGCGGGTTTCGCCGCCCATATAGGAGAGGGACTTGGTGCGGGGGCGTGGGGTTATGTGGCCGCCGTAGCTGCACATCAAACGGAGCTTCGTGGGGGCGGCGGTGATGGCGAGTTGTGGCGGGGACTGTGGGTCCATTTGGCCTCCGTCGCCGGTCCATTGGCGGGCTCTTCTTCTTCTGTTTTCGCCATTTCGTTACTTGATGCACTGAAAACTCGAAAGAGAGTTATGGCAGCAGCGTCTTTTAAGTGGATACTTCAATTACACAAGGACGTTCCCAGAGCCGCAAGATTCTACTCAGAGGGCTTGGACTTTACTGTTCATGTCTGCACTCTTCGTTGGGCGGAGCTTCAGTCCGGGCCTCTCAAACTCGCTCTCATGCAATCCAATGACCATATTGTGCAACAGAAGGGATATTCTTCGCTGCTATCATTCACGGTGACAGATATTAACAGCACGGTAACCAAATTAATGGCAATGGGAGCTGAACTAGATGGTCCAATAAAGTATGAAATACACGGAAAGGTTGCATCCATGCGATGTATTGACGGTCATATGTTGGGCCTTTATGAACCAGCATAA MRNEGGEGVDGGWVDGDYAGFAAHIGEGLGAGAWGYVAAVAAHQTELRGGGGDGELWRGLWVHLASVAGPLAGSSSSVFAISLLDALKTRKRVMAAASFKWILQLHKDVPRAARFYSEGLDFTVHVCTLRWAELQSGPLKLALMQSNDHIVQQKGYSSLLSFTVTDINSTVTKLMAMGAELDGPIKYEIHGKVASMRCIDGHMLGLYEPA Homology
BLAST of Csor.00g118910 vs. NCBI nr
Match: KAG6602695.1 (hypothetical protein SDJN03_07928, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 421 bits (1082), Expect = 1.62e-148 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g118910 vs. NCBI nr
Match: XP_008441280.1 (PREDICTED: uncharacterized protein LOC103485457 isoform X5 [Cucumis melo] >XP_016899420.1 PREDICTED: uncharacterized protein LOC103485457 isoform X5 [Cucumis melo] >XP_016899421.1 PREDICTED: uncharacterized protein LOC103485457 isoform X5 [Cucumis melo]) HSP 1 Score: 242 bits (618), Expect = 4.79e-79 Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Csor.00g118910 vs. NCBI nr
Match: XP_022921566.1 (uncharacterized protein LOC111429787 [Cucurbita moschata] >XP_022921573.1 uncharacterized protein LOC111429787 [Cucurbita moschata] >XP_022921581.1 uncharacterized protein LOC111429787 [Cucurbita moschata] >XP_022921590.1 uncharacterized protein LOC111429787 [Cucurbita moschata] >XP_023536997.1 uncharacterized protein LOC111798215 [Cucurbita pepo subsp. pepo] >XP_023537006.1 uncharacterized protein LOC111798215 [Cucurbita pepo subsp. pepo] >XP_023537015.1 uncharacterized protein LOC111798215 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240 bits (613), Expect = 1.92e-78 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Csor.00g118910 vs. NCBI nr
Match: XP_008441276.1 (PREDICTED: uncharacterized protein LOC103485457 isoform X2 [Cucumis melo]) HSP 1 Score: 242 bits (618), Expect = 1.18e-77 Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Csor.00g118910 vs. NCBI nr
Match: XP_022990824.1 (uncharacterized protein LOC111487602 [Cucurbita maxima]) HSP 1 Score: 238 bits (606), Expect = 2.23e-77 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Csor.00g118910 vs. ExPASy TrEMBL
Match: A0A1S4DTV3 (uncharacterized protein LOC103485457 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103485457 PE=4 SV=1) HSP 1 Score: 242 bits (618), Expect = 2.32e-79 Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Csor.00g118910 vs. ExPASy TrEMBL
Match: A0A6J1E681 (uncharacterized protein LOC111429787 OS=Cucurbita moschata OX=3662 GN=LOC111429787 PE=4 SV=1) HSP 1 Score: 240 bits (613), Expect = 9.29e-79 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Csor.00g118910 vs. ExPASy TrEMBL
Match: A0A1S3B3T9 (uncharacterized protein LOC103485457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485457 PE=4 SV=1) HSP 1 Score: 242 bits (618), Expect = 5.71e-78 Identity = 119/126 (94.44%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of Csor.00g118910 vs. ExPASy TrEMBL
Match: A0A6J1JT34 (uncharacterized protein LOC111487602 OS=Cucurbita maxima OX=3661 GN=LOC111487602 PE=4 SV=1) HSP 1 Score: 238 bits (606), Expect = 1.08e-77 Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Csor.00g118910 vs. ExPASy TrEMBL
Match: A0A1S3B3Q2 (uncharacterized protein LOC103485457 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485457 PE=4 SV=1) HSP 1 Score: 238 bits (608), Expect = 3.86e-76 Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Csor.00g118910 vs. TAIR 10
Match: AT1G64185.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 195.3 bits (495), Expect = 5.0e-50 Identity = 89/118 (75.42%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of Csor.00g118910 vs. TAIR 10
Match: AT5G41650.1 (Lactoylglutathione lyase / glyoxalase I family protein ) HSP 1 Score: 193.7 bits (491), Expect = 1.4e-49 Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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