Csor.00g117980 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g117980
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	cell division topological specificity factor homolog, chloroplastic
Location	Csor_Chr12: 4639207 .. 4641581 (-)
RNA-Seq Expression	Csor.00g117980
Synteny	Csor.00g117980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCAACACTCTGCTCTCACCATCCGCACCCTCTTCGGACTTCTTTTCGCTCTTCAAAGGTCCCTAACTTCTCCTCTTTTCATCTCTCTATATTTTCTTCCAATTCTTCTGTTATTTGTTCCTTCGGTTGCCTAAGCGTTGGAAATTTTGTGTAAATGTGGAATTTGGTGCCTGGAAGATATGAATTCTGAGTTTCGGTGTAAATTGTTTGTTTTGCTCATGCGGCATTTATGAATTGGAGGTTGTGTTAACGCTATCTCTGCAGTTTGGATTTTTTGCTTTACTACAATTATTTTTCAGATTAGTGAACTGTATTCGAGAATTCTAGGGTTCTATGTGAATTTGTAGCAATTTTTTTTATTTTTTTTTTGCTTCATTTTACCCGACAATCCCTTGTAGCGCGCATGGATTAGACTTAATGACCTAATTGACACAAAGGCCTTGATTCCAATGGTTCTATATCATTGCAGAATGAGTCTCTCGTAGTCCACAACAATAGGATTCTCAAAGATTAACCTCATTGAGAACTTTATAACATAAAATGTAGTCTATTAGAGTATGTCTTGGGATAGATGAAACCTCCTTGCATGTTTTTGGTAAGAAATCTTGCAGATATAGCCAAAAACGACCTGGTTCGCATAGAAACGACCCTTTCTTCTGTTTTGTCAAGTTTAAACCTGGGGCTAGTAACAAAATTCGATTTTGGGAGGATATCTGGATCGATTTGACTTCTTTACAGCAGTTTTTTTTTTTTCCCTGTTTTTATGCTGTCTCAACAACTAAAAAAAGGGTTGTCCCCGTGGCAGACAAAATTTGAGTCGAAATACTTGAATATTAACATTCTCCACAACGATGTCGAAAAGTATTGACTGTGACTCAAATTTTTCTGGAGTTGTGATAGTCAATCATGGAACCTGGGTGCTAGGAGACGATGTTTCGATAGAGAGTTTAGCAGCTGGTTATCCTTCCCGGAGAAGATTAATTTGGTTTATTTAGAACAAGTCTACTAGGCTGTTCTTTTATGCCTTCTTTATTGAATATATTCCTCGTGTTCTTATAAAAAAAATCCTGGGAACATGCACAACTTGCCAGACCCACCTTGTAAAAATTAGATTTTGGGTAGAGTGAAGAATGTGATGTAACATAATCCAGATTCTTTCTTATCATGCAGCGATAATGGACTACTTTTCACTAGACTGACTAAATCACAGTGCACGCTATTTAGTATTTCTGGCTGTTCTGACGATTGTGAGATAGTTACACACAAGTCAATTAGTTGTGAAAACAGATCATTTCTATTTCAGCATCTTTCATTTTTCGAATGTAAATATTTGATAGGTTTACACTGAATCAAAAGGATAATCGTAGAGAGACAAGCCTAAAGAAAAATCTATGAGTTCAGCTTCTCTCCCAACTCGAACTCCCGAGTCCAAAACTGTCACCCTTCTGTCTTCGCTTTCCCAAAATACTCCTTTGATTCTCACCTCATCCTGACGCAGTAACGAAGTCGGTTACTTGGAGCTCACTAATATTTATGTTATTTCTACACTAATGGATTCCCCTCCTTCCCTTCCTGCTATAGATGTAAACTATCTGGAACCAGAAAGACCACCCTTACAGATCATGTATTGACCGACACGTTCTTTCACTGAATCGAATAATTAATTCATTGGTAGTTTTGCTGCATTTGGATTTTTTCTCTGGAAACAATTGCATATGTGCCCTGTTGCTTATTGTATGTGCTTCATCCTAGGTTGAATTCTCTGGTTTTTCAAGGGGAGGGCCTTGCATTCAGGAAGTTGCACTAAAATGGCGCAACATGGCAATTGATAGTCGTAATAGGCGTGGCGTTTCTCATATAACTACTGGAAGCTCAGGAAGTTATGAACTGTCGTCAAAGACATCGAGCCAAGAAGCTGAAACCTTCCTTATGAATGCCATAAACATGAACTTCTTTGAGCGTTTAAACTTGGCTTGGAGAATTTTATTTCCAACTCCAGCATCTAAGAGAAACTCCAACGCACTGATCGCCAAGCAGCGACTAAAGATGATCCTGTTTGCTGACCGATGCGCTGTTAGCGACGAGGCTAAGCGGAAGATTGTTAGCAACATAGTGCGAGCTCTATCAGATTTCGTAGAAATTGAATCAAAGGATAAAGTTGAGTTGAGCATGTCAGCAGATGCTGATCTTGGAACCATTTATTCTGTGACAGTACCTGTGAGGAGGGTGAAAAAAGAATATCAAGAAGAAGACGAGAGTGGAACGATAACGAACATAGAATACAAAGATAAGGGAGAGACATCTGGTTCGGTCGACGTGAGGTTTGATTTCTTCATTCCAGATTGA

mRNA sequence

ATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCAACACTCTGCTCTCACCATCCGCACCCTCTTCGGACTTCTTTTCGCTCTTCAAAGGTTGAATTCTCTGGTTTTTCAAGGGGAGGGCCTTGCATTCAGGAAGTTGCACTAAAATGGCGCAACATGGCAATTGATAGTCGTAATAGGCGTGGCGTTTCTCATATAACTACTGGAAGCTCAGGAAGTTATGAACTGTCGTCAAAGACATCGAGCCAAGAAGCTGAAACCTTCCTTATGAATGCCATAAACATGAACTTCTTTGAGCGTTTAAACTTGGCTTGGAGAATTTTATTTCCAACTCCAGCATCTAAGAGAAACTCCAACGCACTGATCGCCAAGCAGCGACTAAAGATGATCCTGTTTGCTGACCGATGCGCTGTTAGCGACGAGGCTAAGCGGAAGATTGTTAGCAACATAGTGCGAGCTCTATCAGATTTCGTAGAAATTGAATCAAAGGATAAAGTTGAGTTGAGCATGTCAGCAGATGCTGATCTTGGAACCATTTATTCTGTGACAGTACCTGTGAGGAGGGTGAAAAAAGAATATCAAGAAGAAGACGAGAGTGGAACGATAACGAACATAGAATACAAAGATAAGGGAGAGACATCTGGTTCGGTCGACGTGAGGTTTGATTTCTTCATTCCAGATTGA

Coding sequence (CDS)

ATGGCGGTTTCTGGAGATCTCAGAGTCTCCGCAACACTCTGCTCTCACCATCCGCACCCTCTTCGGACTTCTTTTCGCTCTTCAAAGGTTGAATTCTCTGGTTTTTCAAGGGGAGGGCCTTGCATTCAGGAAGTTGCACTAAAATGGCGCAACATGGCAATTGATAGTCGTAATAGGCGTGGCGTTTCTCATATAACTACTGGAAGCTCAGGAAGTTATGAACTGTCGTCAAAGACATCGAGCCAAGAAGCTGAAACCTTCCTTATGAATGCCATAAACATGAACTTCTTTGAGCGTTTAAACTTGGCTTGGAGAATTTTATTTCCAACTCCAGCATCTAAGAGAAACTCCAACGCACTGATCGCCAAGCAGCGACTAAAGATGATCCTGTTTGCTGACCGATGCGCTGTTAGCGACGAGGCTAAGCGGAAGATTGTTAGCAACATAGTGCGAGCTCTATCAGATTTCGTAGAAATTGAATCAAAGGATAAAGTTGAGTTGAGCATGTCAGCAGATGCTGATCTTGGAACCATTTATTCTGTGACAGTACCTGTGAGGAGGGTGAAAAAAGAATATCAAGAAGAAGACGAGAGTGGAACGATAACGAACATAGAATACAAAGATAAGGGAGAGACATCTGGTTCGGTCGACGTGAGGTTTGATTTCTTCATTCCAGATTGA

Protein sequence

MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRRGVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNALIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYSVTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD

Homology

[Close]

BLAST of Csor.00g117980 vs. ExPASy Swiss-Prot
Match: Q9C4Z7 (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MINE1 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.3e-68
Identity = 141/227 (62.11%), Postives = 171/227 (75.33%), Query Frame = 0


Query: 4   SGDLRVSATLCS--HHPHPLRTSF--RSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNR 63
           SG LR+SATL S  HH H  R S    SSKV+F+GF   G    E       +AI   N 
Sbjct: 5   SGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENT 64

Query: 64  RGVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNA 123
           RG   +   ++G YELS   + QE E+FL NAINM FF+RLNLAW+I+FP+ AS+R+SNA
Sbjct: 65  RGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNA 124

Query: 124 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIY 183
            IAKQRLKMILF+DRC VSDEAKRKIV+NI+ ALSDFVEIES++KV+L++S D DLGTIY
Sbjct: 125 RIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIY 184

Query: 184 SVTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 227
           SVTVPVRRVK EYQ+ DE+GTITN+EYKD  +  GSVDVRFDF++P+
Sbjct: 185 SVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDVRFDFYVPE 229

[Close]

BLAST of Csor.00g117980 vs. ExPASy Swiss-Prot
Match: A7FXV6 (Cell division topological specificity factor OS=Clostridium botulinum (strain ATCC 19397 / Type A) OX=441770 GN=minE PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.7e-04
Identity = 23/80 (28.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 115 RNSNALIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADAD 174
           + S+  +AK+RLK+IL  DR ++S +    I  ++++ +S ++EI+++D V++ MS+  +
Sbjct: 9   KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 68

Query: 175 ---LGTIYSVTVPVRRVKKE 192
              +      ++P++R+KK+
Sbjct: 69  IEGMSPALIASIPIKRIKKK 87

[Close]

BLAST of Csor.00g117980 vs. ExPASy Swiss-Prot
Match: C3L3K3 (Cell division topological specificity factor OS=Clostridium botulinum (strain 657 / Type Ba4) OX=515621 GN=minE PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.7e-04
Identity = 23/80 (28.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 115 RNSNALIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADAD 174
           + S+  +AK+RLK+IL  DR ++S +    I  ++++ +S ++EI+++D V++ MS+  +
Sbjct: 9   KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 68

Query: 175 ---LGTIYSVTVPVRRVKKE 192
              +      ++P++R+KK+
Sbjct: 69  IEGMSPALIASIPIKRIKKK 87

[Close]

BLAST of Csor.00g117980 vs. ExPASy Swiss-Prot
Match: A5I676 (Cell division topological specificity factor OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) OX=441771 GN=minE PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.7e-04
Identity = 23/80 (28.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 115 RNSNALIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADAD 174
           + S+  +AK+RLK+IL  DR ++S +    I  ++++ +S ++EI+++D V++ MS+  +
Sbjct: 9   KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 68

Query: 175 ---LGTIYSVTVPVRRVKKE 192
              +      ++P++R+KK+
Sbjct: 69  IEGMSPALIASIPIKRIKKK 87

[Close]

BLAST of Csor.00g117980 vs. ExPASy Swiss-Prot
Match: C1FVX5 (Cell division topological specificity factor OS=Clostridium botulinum (strain Kyoto / Type A2) OX=536232 GN=minE PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.7e-04
Identity = 23/80 (28.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 115 RNSNALIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADAD 174
           + S+  +AK+RLK+IL  DR ++S +    I  ++++ +S ++EI+++D V++ MS+  +
Sbjct: 9   KQSSKDVAKERLKLILIQDRNSISPDVLESIREDMLKVISKYIEIDNED-VDIKMSSVEE 68

Query: 175 ---LGTIYSVTVPVRRVKKE 192
              +      ++P++R+KK+
Sbjct: 69  IEGMSPALIASIPIKRIKKK 87

[Close]

BLAST of Csor.00g117980 vs. NCBI nr
Match: XP_022952002.1 (cell division topological specificity factor homolog, chloroplastic [Cucurbita moschata] >KAG6585862.1 Cell division topological specificity factor-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020768.1 Cell division topological specificity factor-like, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441 bits (1133), Expect = 9.29e-156
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL
Sbjct: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Csor.00g117980 vs. NCBI nr
Match: XP_022973268.1 (cell division topological specificity factor homolog, chloroplastic [Cucurbita maxima])

HSP 1 Score: 439 bits (1129), Expect = 3.78e-155
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHHPHPLR+SFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPLRSSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL
Sbjct: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Csor.00g117980 vs. NCBI nr
Match: XP_023538501.1 (cell division topological specificity factor homolog, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433 bits (1113), Expect = 1.08e-152
Identity = 224/227 (98.68%), Postives = 225/227 (99.12%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHHPHPLRT FRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPLRTPFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60

Query: 61  GVSHITTGSSGSYELSSKT-SSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNA 120
           GVSHITTGSSGSYELSSKT SSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNA
Sbjct: 61  GVSHITTGSSGSYELSSKTTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNA 120

Query: 121 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIY 180
           LIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIY
Sbjct: 121 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIY 180

Query: 181 SVTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           SVTVPVRRVK+EYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD
Sbjct: 181 SVTVPVRRVKREYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 227

[Close]

BLAST of Csor.00g117980 vs. NCBI nr
Match: XP_022158361.1 (cell division topological specificity factor homolog, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 402 bits (1034), Expect = 1.15e-140
Identity = 207/226 (91.59%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDL VSATLCSHHP PLRTSF SSKVEFSGFS GGP   EV LKW NMAIDSRN+R
Sbjct: 1   MAVSGDLGVSATLCSHHPQPLRTSFPSSKVEFSGFSSGGPSSHEVVLKWHNMAIDSRNKR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           GVS ITTGSSGSYELSSKTSSQEAETFL+NAINMNFFERLNLAWRILFPTPASKRNSNAL
Sbjct: 61  GVSQITTGSSGSYELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKV+LSMS D+DLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           +TVPVRRVK EYQE DESGTITNIEYKDKGETSGSVDVRFDFFIP+
Sbjct: 181 ITVPVRRVKAEYQEADESGTITNIEYKDKGETSGSVDVRFDFFIPE 226

[Close]

BLAST of Csor.00g117980 vs. NCBI nr
Match: XP_004143776.1 (cell division topological specificity factor homolog, chloroplastic [Cucumis sativus] >KGN51159.1 hypothetical protein Csa_007875 [Cucumis sativus])

HSP 1 Score: 398 bits (1022), Expect = 7.73e-139
Identity = 206/226 (91.15%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHH HPLR SF SSKVEFSGFS GGP   EVALKWRN AIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           G+S ITTGSS S+ELSSKTSSQEAETFL+NAINMNFFERLNLAWRILFP+PASKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKV+LSMS D+DLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           VTVPVRRVK EYQE DESGTITNIEYKD GETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Csor.00g117980 vs. ExPASy TrEMBL
Match: A0A6J1GJ70 (cell division topological specificity factor homolog, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454719 PE=3 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 4.50e-156
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL
Sbjct: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Csor.00g117980 vs. ExPASy TrEMBL
Match: A0A6J1ICJ3 (cell division topological specificity factor homolog, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471838 PE=3 SV=1)

HSP 1 Score: 439 bits (1129), Expect = 1.83e-155
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHHPHPLR+SFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHPHPLRSSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL
Sbjct: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Csor.00g117980 vs. ExPASy TrEMBL
Match: A0A6J1E0P8 (cell division topological specificity factor homolog, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024862 PE=3 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 5.55e-141
Identity = 207/226 (91.59%), Postives = 213/226 (94.25%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDL VSATLCSHHP PLRTSF SSKVEFSGFS GGP   EV LKW NMAIDSRN+R
Sbjct: 1   MAVSGDLGVSATLCSHHPQPLRTSFPSSKVEFSGFSSGGPSSHEVVLKWHNMAIDSRNKR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           GVS ITTGSSGSYELSSKTSSQEAETFL+NAINMNFFERLNLAWRILFPTPASKRNSNAL
Sbjct: 61  GVSQITTGSSGSYELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPTPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKV+LSMS D+DLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           +TVPVRRVK EYQE DESGTITNIEYKDKGETSGSVDVRFDFFIP+
Sbjct: 181 ITVPVRRVKAEYQEADESGTITNIEYKDKGETSGSVDVRFDFFIPE 226

[Close]

BLAST of Csor.00g117980 vs. ExPASy TrEMBL
Match: A0A0A0KQJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469010 PE=3 SV=1)

HSP 1 Score: 398 bits (1022), Expect = 3.74e-139
Identity = 206/226 (91.15%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHH HPLR SF SSKVEFSGFS GGP   EVALKWRN AIDSRNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDSRNRR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           G+S ITTGSS S+ELSSKTSSQEAETFL+NAINMNFFERLNLAWRILFP+PASKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKV+LSMS D+DLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           VTVPVRRVK EYQE DESGTITNIEYKD GETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Csor.00g117980 vs. ExPASy TrEMBL
Match: A0A1S3CPL3 (cell division topological specificity factor homolog, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103503356 PE=3 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 2.16e-138
Identity = 205/226 (90.71%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MAVSGDLRVSATLCSHHPHPLRTSFRSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNRR 60
           MAVSGDLRVSATLCSHH HPLR SF SSKVEFSGFS GGP   EVALKWRN AID RNRR
Sbjct: 1   MAVSGDLRVSATLCSHHSHPLRPSFPSSKVEFSGFSCGGPSSHEVALKWRNTAIDRRNRR 60

Query: 61  GVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNAL 120
           G+S ITTGSS S+ELSSKTSSQEAETFL+NAINMNFFERLNLAWRILFP+PASKRNSNAL
Sbjct: 61  GISQITTGSSESFELSSKTSSQEAETFLLNAINMNFFERLNLAWRILFPSPASKRNSNAL 120

Query: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIYS 180
           IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKV+LSMS D+DLGTIYS
Sbjct: 121 IAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVQLSMSTDSDLGTIYS 180

Query: 181 VTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 226
           VTVPVRRVK EYQE DESGTITNIEYKD GETSGSVDVRFDFFIPD
Sbjct: 181 VTVPVRRVKAEYQEADESGTITNIEYKDNGETSGSVDVRFDFFIPD 226

[Close]

BLAST of Csor.00g117980 vs. TAIR 10
Match: AT1G69390.1 (homologue of bacterial MinE 1 )

HSP 1 Score: 258.5 bits (659), Expect = 5.2e-69
Identity = 141/227 (62.11%), Postives = 171/227 (75.33%), Query Frame = 0


Query: 4   SGDLRVSATLCS--HHPHPLRTSF--RSSKVEFSGFSRGGPCIQEVALKWRNMAIDSRNR 63
           SG LR+SATL S  HH H  R S    SSKV+F+GF   G    E       +AI   N 
Sbjct: 5   SGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAISRENT 64

Query: 64  RGVSHITTGSSGSYELSSKTSSQEAETFLMNAINMNFFERLNLAWRILFPTPASKRNSNA 123
           RG   +   ++G YELS   + QE E+FL NAINM FF+RLNLAW+I+FP+ AS+R+SNA
Sbjct: 65  RGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRRSSNA 124

Query: 124 LIAKQRLKMILFADRCAVSDEAKRKIVSNIVRALSDFVEIESKDKVELSMSADADLGTIY 183
            IAKQRLKMILF+DRC VSDEAKRKIV+NI+ ALSDFVEIES++KV+L++S D DLGTIY
Sbjct: 125 RIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDLGTIY 184

Query: 184 SVTVPVRRVKKEYQEEDESGTITNIEYKDKGETSGSVDVRFDFFIPD 227
           SVTVPVRRVK EYQ+ DE+GTITN+EYKD  +  GSVDVRFDF++P+
Sbjct: 185 SVTVPVRRVKPEYQDVDEAGTITNVEYKDTRD--GSVDVRFDFYVPE 229

The following BLAST results are available for this feature:

BLAST of Csor.00g117980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C4Z7	7.3e-68	62.11	Cell division topological specificity factor homolog, chloroplastic OS=Arabidops...	[more]
A7FXV6	9.7e-04	28.75	Cell division topological specificity factor OS=Clostridium botulinum (strain AT...	[more]
C3L3K3	9.7e-04	28.75	Cell division topological specificity factor OS=Clostridium botulinum (strain 65...	[more]
A5I676	9.7e-04	28.75	Cell division topological specificity factor OS=Clostridium botulinum (strain Ha...	[more]
C1FVX5	9.7e-04	28.75	Cell division topological specificity factor OS=Clostridium botulinum (strain Ky...	[more]

BLAST of Csor.00g117980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952002.1	9.29e-156	100.00	cell division topological specificity factor homolog, chloroplastic [Cucurbita m...	[more]
XP_022973268.1	3.78e-155	99.56	cell division topological specificity factor homolog, chloroplastic [Cucurbita m...	[more]
XP_023538501.1	1.08e-152	98.68	cell division topological specificity factor homolog, chloroplastic [Cucurbita p...	[more]
XP_022158361.1	1.15e-140	91.59	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
XP_004143776.1	7.73e-139	91.15	cell division topological specificity factor homolog, chloroplastic [Cucumis sat...	[more]

BLAST of Csor.00g117980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJ70	4.50e-156	100.00	cell division topological specificity factor homolog, chloroplastic OS=Cucurbita...	[more]
A0A6J1ICJ3	1.83e-155	99.56	cell division topological specificity factor homolog, chloroplastic OS=Cucurbita...	[more]
A0A6J1E0P8	5.55e-141	91.59	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
A0A0A0KQJ9	3.74e-139	91.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469010 PE=3 SV=1	[more]
A0A1S3CPL3	2.16e-138	90.71	cell division topological specificity factor homolog, chloroplastic-like OS=Cucu...	[more]

BLAST of Csor.00g117980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69390.1	5.2e-69	62.11	homologue of bacterial MinE 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005527	Cell division topological specificity factor MinE	PFAM	PF03776	MinE	coord: 121..186 e-value: 1.0E-12 score: 47.9
IPR005527	Cell division topological specificity factor MinE	PANTHER	PTHR33404	CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC	coord: 1..226
IPR036707	Cell division topological specificity factor MinE superfamily	GENE3D	3.30.1070.10	Cell division topological specificity factor MinE	coord: 104..185 e-value: 1.7E-6 score: 29.6
None	No IPR available	PANTHER	PTHR33404:SF9	BNAC06G30560D PROTEIN	coord: 1..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g117980.m01	Csor.00g117980.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0032955	regulation of division septum assembly
biological_process	GO:0051301	cell division