Csor.00g117860 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGAGGAGGAGGTGGAATGTCCCAATGAAGAAGATGGTGAAGAAGAGATGAAAGAAACAAAGAATGAGAGTGGAGCCAAGTTTCCAAAGCTATGGAGTGAAGAAGATGAGATTAGTTTGCTAAGTGGGTATTACGAGTATCAAGGAATAAAAGCCAAATCCGACATTGGTGGATTTTATGAATTCATAAAGCCTCGACTCCTTCGTAACTGTGTGAAGCAATCTCAAGTTTCAGATAAGATTTGTCGTCTAAAGAAGAAGTTCATGGAGCATTCATCCAAATTTGAACACAATACCCACAACACTCCTCACCTCCAAACACTATTTGAACTGTCCACCAAAATTTGGGGCAGTATGGTATGTTCGAAGTTTGAGGTGTCCAATGATTTAATGTGCGAAGAATTTGATGGCTTCCTTTTCCATGAAGGAGTGGATGTTGAGTTGTTGGAGAGTGAGAGAGTGAGAAGCATGAAGAGGAAATTTGGGGAGGTCCAGCTTTGTAGAAGCAGATTCGAGTACAAGCAAGCCAAACTAGCCAAGAACATGGAAAGGCTGAAGTATGATCATTATAATAGGGCGTTGGTGAAGTTTTTTCCTTGA ATGCAAGAGGAGGAGGTGGAATGTCCCAATGAAGAAGATGGTGAAGAAGAGATGAAAGAAACAAAGAATGAGAGTGGAGCCAAGTTTCCAAAGCTATGGAGTGAAGAAGATGAGATTAGTTTGCTAAGTGGGTATTACGAGTATCAAGGAATAAAAGCCAAATCCGACATTGGTGGATTTTATGAATTCATAAAGCCTCGACTCCTTCGTAACTGTGTGAAGCAATCTCAAGTTTCAGATAAGATTTGTCGTCTAAAGAAGAAGTTCATGGAGCATTCATCCAAATTTGAACACAATACCCACAACACTCCTCACCTCCAAACACTATTTGAACTGTCCACCAAAATTTGGGGCAGTATGGTATGTTCGAAGTTTGAGGTGTCCAATGATTTAATGTGCGAAGAATTTGATGGCTTCCTTTTCCATGAAGGAGTGGATGTTGAGTTGTTGGAGAGTGAGAGAGTGAGAAGCATGAAGAGGAAATTTGGGGAGGTCCAGCTTTGTAGAAGCAGATTCGAGTACAAGCAAGCCAAACTAGCCAAGAACATGGAAAGGCTGAAGTATGATCATTATAATAGGGCGTTGGTGAAGTTTTTTCCTTGA ATGCAAGAGGAGGAGGTGGAATGTCCCAATGAAGAAGATGGTGAAGAAGAGATGAAAGAAACAAAGAATGAGAGTGGAGCCAAGTTTCCAAAGCTATGGAGTGAAGAAGATGAGATTAGTTTGCTAAGTGGGTATTACGAGTATCAAGGAATAAAAGCCAAATCCGACATTGGTGGATTTTATGAATTCATAAAGCCTCGACTCCTTCGTAACTGTGTGAAGCAATCTCAAGTTTCAGATAAGATTTGTCGTCTAAAGAAGAAGTTCATGGAGCATTCATCCAAATTTGAACACAATACCCACAACACTCCTCACCTCCAAACACTATTTGAACTGTCCACCAAAATTTGGGGCAGTATGGTATGTTCGAAGTTTGAGGTGTCCAATGATTTAATGTGCGAAGAATTTGATGGCTTCCTTTTCCATGAAGGAGTGGATGTTGAGTTGTTGGAGAGTGAGAGAGTGAGAAGCATGAAGAGGAAATTTGGGGAGGTCCAGCTTTGTAGAAGCAGATTCGAGTACAAGCAAGCCAAACTAGCCAAGAACATGGAAAGGCTGAAGTATGATCATTATAATAGGGCGTTGGTGAAGTTTTTTCCTTGA MQEEEVECPNEEDGEEEMKETKNESGAKFPKLWSEEDEISLLSGYYEYQGIKAKSDIGGFYEFIKPRLLRNCVKQSQVSDKICRLKKKFMEHSSKFEHNTHNTPHLQTLFELSTKIWGSMVCSKFEVSNDLMCEEFDGFLFHEGVDVELLESERVRSMKRKFGEVQLCRSRFEYKQAKLAKNMERLKYDHYNRALVKFFP Homology
BLAST of Csor.00g117860 vs. ExPASy Swiss-Prot
Match: Q94IK2 (STOREKEEPER protein OS=Solanum tuberosum OX=4113 GN=STK PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.0e-09 Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy Swiss-Prot
Match: Q9CAV7 (Probable transcription factor At3g04930 OS=Arabidopsis thaliana OX=3702 GN=At3g04930 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy Swiss-Prot
Match: O23063 (Probable transcription factor At4g00390 OS=Arabidopsis thaliana OX=3702 GN=At4g00390 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.4e-08 Identity = 39/95 (41.05%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy Swiss-Prot
Match: F4K5T4 (Probable transcription factor At5g28040 OS=Arabidopsis thaliana OX=3702 GN=At5g28040 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.7e-08 Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy Swiss-Prot
Match: Q9C517 (Probable transcription factor At1g66420 OS=Arabidopsis thaliana OX=3702 GN=At1g66420 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07 Identity = 58/190 (30.53%), Postives = 91/190 (47.89%), Query Frame = 0
BLAST of Csor.00g117860 vs. NCBI nr
Match: KAG6585874.1 (STOREKEEPER protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 398 bits (1023), Expect = 7.48e-140 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Csor.00g117860 vs. NCBI nr
Match: XP_022951916.1 (STOREKEEPER protein-like [Cucurbita moschata]) HSP 1 Score: 396 bits (1018), Expect = 4.33e-139 Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Csor.00g117860 vs. NCBI nr
Match: XP_023521142.1 (STOREKEEPER protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 390 bits (1002), Expect = 1.19e-136 Identity = 195/200 (97.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Csor.00g117860 vs. NCBI nr
Match: XP_031091837.1 (STOREKEEPER protein-like [Ipomoea triloba]) HSP 1 Score: 77.4 bits (189), Expect = 1.01e-12 Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of Csor.00g117860 vs. NCBI nr
Match: XP_028055999.1 (STOREKEEPER protein-like [Camellia sinensis] >THG20346.1 hypothetical protein TEA_026644 [Camellia sinensis var. sinensis]) HSP 1 Score: 76.3 bits (186), Expect = 2.46e-12 Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy TrEMBL
Match: A0A6J1GIT7 (STOREKEEPER protein-like OS=Cucurbita moschata OX=3662 GN=LOC111454656 PE=3 SV=1) HSP 1 Score: 396 bits (1018), Expect = 2.10e-139 Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy TrEMBL
Match: A0A4S4EVI7 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_026644 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.19e-12 Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy TrEMBL
Match: A0A5N6RBN6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014454 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.20e-12 Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy TrEMBL
Match: A0A2P5AAI7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_351760 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.68e-12 Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of Csor.00g117860 vs. ExPASy TrEMBL
Match: A0A5B6YM87 (Putative mediator-associated protein 1 OS=Davidia involucrata OX=16924 GN=Din_002375 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.88e-12 Identity = 48/117 (41.03%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of Csor.00g117860 vs. TAIR 10
Match: AT3G04930.1 (DNA-binding storekeeper protein-related transcriptional regulator ) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of Csor.00g117860 vs. TAIR 10
Match: AT3G04930.2 (DNA-binding storekeeper protein-related transcriptional regulator ) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0
BLAST of Csor.00g117860 vs. TAIR 10
Match: AT4G00390.1 (DNA-binding storekeeper protein-related transcriptional regulator ) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09 Identity = 39/95 (41.05%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of Csor.00g117860 vs. TAIR 10
Match: AT5G28040.1 (DNA-binding storekeeper protein-related transcriptional regulator ) HSP 1 Score: 59.3 bits (142), Expect = 4.1e-09 Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 0
BLAST of Csor.00g117860 vs. TAIR 10
Match: AT1G66420.1 (DNA-binding storekeeper protein-related transcriptional regulator ) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08 Identity = 58/190 (30.53%), Postives = 91/190 (47.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|