Csor.00g117820 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g117820
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Glutathione transport system permease gsiD
Location	Csor_Chr12: 4942679 .. 4943391 (+)
RNA-Seq Expression	Csor.00g117820
Synteny	Csor.00g117820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGCAGCGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGAATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGGTGCGCTACTTTCTCATTCTTTTAGATTCGAAAATCGAGCCAATCTGAGATTAATCTCCTCAATTTCTGTTTTCTTTTGGCAATCTGTGTAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTAACAAGAGATAGCGAAAATTGAAGGTAAAGCCATTGAACTTTTTTCGTGTTCCGTACAGAAATTGCAATTTTCTTTGCTTTTTTTCGGTGCTTTTGTGTGGTGAAGGTGAATTCAGGATTGTGTTGCTGAGAATAGAGATTTGGAATCGGATTCTCTGTGATTTTCTTTTGCCATTTGATTGA

mRNA sequence

ATGGCTTGGCAGCGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGAATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTGAATTCAGGATTGTGTTGCTGAGAATAGAGATTTGGAATCGGATTCTCTGTGATTTTCTTTTGCCATTTGATTGA

Coding sequence (CDS)

ATGGCTTGGCAGCGTCTCTATCTTCCTCCGCCGGTAAAATCCGTTTTCTCGATGAATTGCATTACCTCCGCCATTGAGTTGCCTGTTCTCCGATCTCATTTCAAGCCAAATCGCCGGCAACGAAAGCAGAACAACTCACAATCTCAGCCACGAATTTACATTTCTCCACAAAGCAACCGATTCGCTTCACTAACAGCCAACGCAATTCCAAACTCTCTAGTTCTCGCAAACAGTACTATTCCTCCGTCGCAGTCCGGCGACGTATCGGTCCTCCTCCAGACAAGCGGCGTGCTTCTGATCGTGTATTTGATAGCGAATTTCATTGTGCCGGAGTTCATTATGAAATCGTACAGTACCGATGAGAGCGAGGGGAAAGCATTGATGGAAGACGATGAAAAAGGCGCCAGTGAAAGGAGGAAGAAACAAGGCTTTGGCGGTGAATTCAGGATTGTGTTGCTGAGAATAGAGATTTGGAATCGGATTCTCTGTGATTTTCTTTTGCCATTTGATTGA

Protein sequence

MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNRFASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESEGKALMEDDEKGASERRKKQGFGGEFRIVLLRIEIWNRILCDFLLPFD

Homology

[Close]

BLAST of Csor.00g117820 vs. NCBI nr
Match: KAG6585878.1 (hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329 bits (844), Expect = 1.50e-113
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR
Sbjct: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGEFRIVLLRIEIWNRILCDFLLPFD 170
           ESEGKALMEDDEKGASERRKKQGFGGEFRIVLLRIEIWNRILCDFLLPFD
Sbjct: 121 ESEGKALMEDDEKGASERRKKQGFGGEFRIVLLRIEIWNRILCDFLLPFD 170

[Close]

BLAST of Csor.00g117820 vs. NCBI nr
Match: KAG6607795.1 (hypothetical protein SDJN03_01137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327 bits (838), Expect = 1.24e-112
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQ LYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGEFRIVLLRIEIWNRILCDFLLPFD 170
           ESEGKALMEDDEKGASERRKKQGFGGEFRIVLLRIEIWNRILCDFLLPFD
Sbjct: 121 ESEGKALMEDDEKGASERRKKQGFGGEFRIVLLRIEIWNRILCDFLLPFD 170

[Close]

BLAST of Csor.00g117820 vs. NCBI nr
Match: XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothetical protein SDJN02_00995 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278 bits (712), Expect = 9.73e-94
Identity = 146/149 (97.99%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQ LYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGEFR 149
           ESEGKALMEDDEKGASERRKKQGFGG  R
Sbjct: 121 ESEGKALMEDDEKGASERRKKQGFGGNKR 149

[Close]

BLAST of Csor.00g117820 vs. NCBI nr
Match: XP_023525256.1 (uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268 bits (685), Expect = 1.27e-89
Identity = 139/149 (93.29%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQ LYLPPPVKSVF MNCITSAIELP+LRSH KPNRRQR+QNNSQSQPR+YISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFPMNCITSAIELPILRSHLKPNRRQRQQNNSQSQPRMYISPQSNR 60

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVY IANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYFIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGEFR 149
           ESEGKALMED+EKGASERRKKQGFGG  R
Sbjct: 121 ESEGKALMEDEEKGASERRKKQGFGGNKR 149

[Close]

BLAST of Csor.00g117820 vs. NCBI nr
Match: XP_022981640.1 (uncharacterized protein LOC111480699 [Cucurbita maxima])

HSP 1 Score: 265 bits (678), Expect = 1.94e-88
Identity = 142/149 (95.30%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQ LYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP IYISPQSNR
Sbjct: 10  MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 69

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 70  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 129

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGEFR 149
           ESEGKALMED+E GASERRKKQGFGG  R
Sbjct: 130 ESEGKALMEDEEIGASERRKKQGFGGNKR 157

[Close]

BLAST of Csor.00g117820 vs. ExPASy TrEMBL
Match: A0A6J1FK57 (uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC111446047 PE=4 SV=1)

HSP 1 Score: 278 bits (712), Expect = 4.71e-94
Identity = 146/149 (97.99%), Postives = 146/149 (97.99%), Query Frame = 0


Query: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQ LYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR
Sbjct: 1   MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGEFR 149
           ESEGKALMEDDEKGASERRKKQGFGG  R
Sbjct: 121 ESEGKALMEDDEKGASERRKKQGFGGNKR 149

[Close]

BLAST of Csor.00g117820 vs. ExPASy TrEMBL
Match: A0A6J1J030 (uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 9.41e-89
Identity = 142/149 (95.30%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MAWQRLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSNR 60
           MAWQ LYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQP IYISPQSNR
Sbjct: 10  MAWQSLYLPPPVKSVFSMNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQSNR 69

Query: 61  FASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 120
           FASLTANAIPNSLVLAN TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD
Sbjct: 70  FASLTANAIPNSLVLAN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYSTD 129

Query: 121 ESEGKALMEDDEKGASERRKKQGFGGEFR 149
           ESEGKALMED+E GASERRKKQGFGG  R
Sbjct: 130 ESEGKALMEDEEIGASERRKKQGFGGNKR 157

[Close]

BLAST of Csor.00g117820 vs. ExPASy TrEMBL
Match: A0A5D3BI04 (Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27427G00010 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 1.53e-25
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQSN-RFASLTANAI--PNSLV 77
           MN I S+IE  +L S   P      Q+N     +I++SPQ+  RF S+  N+I   NSL+
Sbjct: 1   MNSIFSSIEFRLLPSPNPPQ----PQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLI 60

Query: 78  LANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125
           L NSTIPP+QSGD+SVLLQTSGVLLI YLIANFI PEFIMKSY S DESEGK
Sbjct: 61  LGNSTIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGK 108

[Close]

BLAST of Csor.00g117820 vs. ExPASy TrEMBL
Match: A0A0A0K9M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 1.69e-24
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQ-SNRFASLTANAI-PNSLVL 77
           MN I S+I+  +L S   PN RQ  Q+N     +IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60

Query: 78  ANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125
            NSTIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107

[Close]

BLAST of Csor.00g117820 vs. ExPASy TrEMBL
Match: B9SV97 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.81e-11
Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 60  RFASLTANAIPNSLVLANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSYST 119
           R  S+  NA+PN L+LA ST  P+Q GD+SVLL T G+LL VY IANF+VP FI KS+ +
Sbjct: 40  RVLSVRTNAVPNPLILAEST-SPAQGGDISVLLPTGGLLLFVYGIANFVVPFFISKSFES 99

[Close]

BLAST of Csor.00g117820 vs. TAIR 10
Match: AT1G50732.1 (unknown protein. )

HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 30/94 (31.91%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 39  RQRKQNNSQSQPRIYISPQSNRFASLT-------ANAIPNSLVL--ANSTIPPSQSGDVS 98
           +Q KQ  S  + +++    S+  +SL+       +N   N   L    S +PPS+SGD++
Sbjct: 19  QQAKQEESLRRKQVFFFLSSSSPSSLSTKHQWQISNYPKNGFRLKPKASVLPPSESGDIT 78

Query: 99  VLLQTSGVLLIVYLIANFIVPEFIMKSYSTDESE 124
             L  SG ++ +YL+ NF+VP  + KS   +E E
Sbjct: 79  TFLFVSGAMISMYLVTNFLVPSLLFKSLQGEEEE 112

The following BLAST results are available for this feature:

BLAST of Csor.00g117820 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g117820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585878.1	1.50e-113	100.00	hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6607795.1	1.24e-112	99.41	hypothetical protein SDJN03_01137, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022940449.1	9.73e-94	97.99	uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothet...	[more]
XP_023525256.1	1.27e-89	93.29	uncharacterized protein LOC111788910 [Cucurbita pepo subsp. pepo]	[more]
XP_022981640.1	1.94e-88	95.30	uncharacterized protein LOC111480699 [Cucurbita maxima]	[more]

BLAST of Csor.00g117820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FK57	4.71e-94	97.99	uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC1114460...	[more]
A0A6J1J030	9.41e-89	95.30	uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699...	[more]
A0A5D3BI04	1.53e-25	60.71	Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K9M2	1.69e-24	59.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1	[more]
B9SV97	1.81e-11	59.02	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1	[more]

BLAST of Csor.00g117820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50732.1	1.1e-04	31.91	unknown protein.	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37196	TRANSMEMBRANE PROTEIN	coord: 18..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g117820.m01	Csor.00g117820.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane