Csor.00g117060 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGGTACCCCCTTTCTTCTTTTTATTACTTGTACATGTTTCGTTTTGCTTTTCTTTTTCTAATTATTTGGGTTGTGGCTTTAACTTTAGTGGTTTTTCATCTCATTGTATGGAAATTCTTTCATTCTCTTCGACTCAATCCACGGCGAATCTCGATATCAAAACTATTTCTATTGGCTAGGTGCTCAATTTGTAGTCCGTTCGTCCCTTCTTATTACAATATTCACTTCTTTTTAATTCTTCATGAATTAGTCTGCATTCCTAGCACTCAGATGTTGTACGATCAAAACGAGAGAGCAGTCAGTGGTGTAGTGTAGGAGGAATGTGGCTCGTTTTTTGAAACTCAACTCTTCTTTTTTAATTCTTTTATCATCTTGTATGTATAAGTCATATTAGTCGTACAGTATGAAGTATTAAAAATGTTCTCTTTTAATAAGCTAGTTATGTTTGTTTTGGTCCTTTCTCTCTGTGATTATGACCCTAAACCTTTGTCATGAAAACTAAAGGAAGCGTAATGCTAAGTGTTGTTATATTGTGCTTTCCTATGAGCTAGAGACTAGGTTTTGTTTTTAAAATTTTAGAAGAGTTATGTTTTAAGCTGTTGGATGGGGATGGGGTGTTTTGAGAAGAAATCTGGAGAGGGTCTTTCCAACTCCAATGGTGGCAGCTGCAGAAAACAGAACGAACAATAATAAATCTTCATTACTTGTTGAAACTATTAATTTGAGCTGAGTTGTCCGTAAAAGTAAAGAATATGAAGAGGGTTTTGTTGGCTGGCACTCTACTAGGCCTTGAGAATAGAGTTGTTGGATTGGAGGCCCTCATTTATTTGTTTGTTTGTTTGTAATTGCGTGTTACAGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAGTCCCGTGGCCACTGTACTTGGATACATGGCCTCTCCCAATACTTAACTATATTGTATTAAGTACTAAGTTCAGTGACATTTGGTTAACCCTTCAAGTTTAATTATTTATTTCTTACTCTCACTCTTCTGTTTACTTGGTCAACCAATTCTAGCACTTTTTTGGCCAAACCCTGTTCCAAGACTTTACGGGAATCCTCATAATTTTGGTTTCAAATCATTCTAATTTAATATATTTTAAAATTATTATTAAAAAAATTTAACAAAATTATTGATGGAAGGCTTAATTGAGAATATTAATATATCAAGGATAAATATTAGAAGTAATTTTGATATGAGAATTTAAATTGAAATTTAAAAGAAGAAGTAGGCATTGATCTCACTTTAACCAAAAATTAATTATTGTAGTATTTATTTTAGCTTTAGTTTTTTAATAAAAAAAAAGAAAAAAAAAGAAGCAGAAATGAGATGAGTTAATGAAAAAGAAACACATGTTGAGCATCGGAAATGACAGTGGTTTGAGCTCTACCTATGTGGTTTGAGTTAATAATAATAAAATAATAAAAACCTACAATACCCACGAGCGAATCAAGCAAGCAAGGCGAAGAGGCGAGAAGTTGTCCTGAAAACTGAAAATCAGAGGGAGCTGAGTTGTTATTTTGCAAATATCTGGTCTGCTTCTGGTTTTCCCCAAATTTTCTGGAGCTGCCGCGATCTTCCTCCTTCCTCCTTCCTCCTGATTTAGGTTTGATTGTTCATCTTTTCTTCCCAATCCCCAATCCCAATCCCAATCCCCAATCCCAATCCCCAATCCCAATCCCAATCCCCAATCCCCAATCCCAATCCCAATCCCCAATCCCCAATCCCAATCCCAATCCCCAATCCCCAATCCCAATCCCTCACTTTCCCTTCTCTAATTTTAGACGCCTTCTCGACGGAACGCTTGACTGGCTGCCCCATGGAAAGCGGAGCAGGTATTCCTTTCTTTATTTTGCGATCTCTCTTCATGTTTGCGTCACTTTTCTTTTCTTTTTTTCTTTCCTTTCCTGTGATTTCGATGTCTTCTCTCTTTCTCTCATTCTGCTTATACCTCCTCTAATTCGCCTTATAAATGACATTTTTCTCTCCTATAATTGCATTTCTCAAGGTATATCTCGTTTCCCCTCCCCCCATTAGGTGCCTTGTCAATGGGAGGCCTCTCACTGACACACAACTTCCCTTCTTCTCCATTCATGGGAGGAGACCCTCTACTGCATATGTGGGACGTTGTATGA ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGAGGGAGCTGAGTTGTTATTTTGCAAATATCTGGTCTGCTTCTGGTTTTCCCCAAATTTTCTGGAGCTGCCGCGATCTTCCTCCTTCCTCCTTCCTCCTGATTTAGACGCCTTCTCGACGGAACGCTTGACTGGCTGCCCCATGGAAAGCGGAGCAGGTGCCTTGTCAATGGGAGGCCTCTCACTGACACACAACTTCCCTTCTTCTCCATTCATGGGAGGAGACCCTCTACTGCATATGTGGGACGTTGTATGA ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCTCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCTCCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAAAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGAGGGAGCTGAGTTGTTATTTTGCAAATATCTGGTCTGCTTCTGGTTTTCCCCAAATTTTCTGGAGCTGCCGCGATCTTCCTCCTTCCTCCTTCCTCCTGATTTAGACGCCTTCTCGACGGAACGCTTGACTGGCTGCCCCATGGAAAGCGGAGCAGGTGCCTTGTCAATGGGAGGCCTCTCACTGACACACAACTTCCCTTCTTCTCCATTCATGGGAGGAGACCCTCTACTGCATATGTGGGACGTTGTATGA MAKSMRSKREKRLRAIRREMVEPIYDKKDAAKLAAQQAALAAPKLPVRPSPFTNISTMDVAPASTSTAADAAMEVEMDDGSESMMALKAVGGIGKKSKKKFKVGKAKRREGAELLFCKYLVCFWFSPNFLELPRSSSFLLPPDLDAFSTERLTGCPMESGAGALSMGGLSLTHNFPSSPFMGGDPLLHMWDVV Homology
BLAST of Csor.00g117060 vs. NCBI nr
Match: KAG6594375.1 (hypothetical protein SDJN03_10928, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 371 bits (952), Expect = 2.94e-129 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Csor.00g117060 vs. NCBI nr
Match: XP_022926965.1 (uncharacterized protein LOC111433923 [Cucurbita moschata] >XP_023003712.1 uncharacterized protein LOC111497220 [Cucurbita maxima] >XP_023517951.1 uncharacterized protein LOC111781531 [Cucurbita pepo subsp. pepo] >KAG7026380.1 hypothetical protein SDJN02_10379 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193 bits (491), Expect = 4.10e-60 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Csor.00g117060 vs. NCBI nr
Match: XP_038877484.1 (uncharacterized protein LOC120069761 [Benincasa hispida]) HSP 1 Score: 154 bits (389), Expect = 1.27e-44 Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of Csor.00g117060 vs. NCBI nr
Match: XP_022978967.1 (uncharacterized protein LOC111478758 [Cucurbita maxima]) HSP 1 Score: 154 bits (389), Expect = 1.27e-44 Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Csor.00g117060 vs. NCBI nr
Match: XP_023544802.1 (uncharacterized protein LOC111804285 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154 bits (389), Expect = 1.27e-44 Identity = 93/110 (84.55%), Postives = 99/110 (90.00%), Query Frame = 0
BLAST of Csor.00g117060 vs. ExPASy TrEMBL
Match: A0A6J1KND1 (uncharacterized protein LOC111497220 OS=Cucurbita maxima OX=3661 GN=LOC111497220 PE=4 SV=1) HSP 1 Score: 193 bits (491), Expect = 1.99e-60 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Csor.00g117060 vs. ExPASy TrEMBL
Match: A0A6J1EMJ6 (uncharacterized protein LOC111433923 OS=Cucurbita moschata OX=3662 GN=LOC111433923 PE=4 SV=1) HSP 1 Score: 193 bits (491), Expect = 1.99e-60 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Csor.00g117060 vs. ExPASy TrEMBL
Match: A0A6J1IMI5 (uncharacterized protein LOC111478758 OS=Cucurbita maxima OX=3661 GN=LOC111478758 PE=4 SV=1) HSP 1 Score: 154 bits (389), Expect = 6.16e-45 Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Csor.00g117060 vs. ExPASy TrEMBL
Match: A0A0A0KJ42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538670 PE=4 SV=1) HSP 1 Score: 151 bits (381), Expect = 1.01e-43 Identity = 89/110 (80.91%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Csor.00g117060 vs. ExPASy TrEMBL
Match: A0A6J1EC45 (uncharacterized protein LOC111432982 OS=Cucurbita moschata OX=3662 GN=LOC111432982 PE=4 SV=1) HSP 1 Score: 151 bits (381), Expect = 1.01e-43 Identity = 92/110 (83.64%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of Csor.00g117060 vs. TAIR 10
Match: AT1G30880.1 (unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13 Identity = 59/114 (51.75%), Postives = 71/114 (62.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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