Csor.00g116030 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g116030
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	agamous-like MADS-box protein AGL62
Location	Csor_Chr07: 695604 .. 696341 (-)
RNA-Seq Expression	Csor.00g116030
Synteny	Csor.00g116030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACGGCAGCACCAAAATTAAGCAAACAAAGGGCCGACAAAAGATCGAGATGAAGAAGATTGAAAACGAAGACGACCGCCTCATCACCTTCTCCAAGCGCCGCTCCGGCATCTACAAAAAGGCCAGCGAATTAGCCACCTTGTGCGGCGCTGAAGTCGGCGTGGTCGTGTTTTCCCCAGCTGGAAAGCCCTTTTCCTTTGCTCATCCATGCATCGAATCTGTGGCTAACAAATTCCTTGATGAAAACCCTCAGCCAAACGACAACACTCACCCGCTTGTCGAAGCTCATCGACGCCTCAGAATCAACGAGCTGAACCAACAACACAATCAACTTCTGAGCCAGCTGGATGCCGAGAAGGAGAAAGGTAAGGCGCTTGAGAAACTGAAGAAGGTGAGAGGCAATAACGGGCGTGGTTGGTGGGAGTCTCCAACTGAAGAACTGGGAATTGAGGAATTGCAACAAGTTGATGGATCGCTGGGAGAATTGTACCAAAATGTTTGTCATGAACTCAAAGAGCGCGGCGTTCTTGGATCTTCTTCATACTCAGCTTCAAACACTTTGGGCTTTGATCATGCCGGCCGTGAAGAAACAATTCCTTTCAATATCTTAGCAACTGGAGCTGCTGCTGCTGCTGGTCCTTCTTCCGCTACTTATCTTCCTGATCCTAATCCCTTCGATTATGGACAACAACCACAACCACATCTCCCTCATCACCACCACCACCATCCATGA

mRNA sequence

ATGGCCGACGGCAGCACCAAAATTAAGCAAACAAAGGGCCGACAAAAGATCGAGATGAAGAAGATTGAAAACGAAGACGACCGCCTCATCACCTTCTCCAAGCGCCGCTCCGGCATCTACAAAAAGGCCAGCGAATTAGCCACCTTGTGCGGCGCTGAAGTCGGCGTGGTCGTGTTTTCCCCAGCTGGAAAGCCCTTTTCCTTTGCTCATCCATGCATCGAATCTGTGGCTAACAAATTCCTTGATGAAAACCCTCAGCCAAACGACAACACTCACCCGCTTGTCGAAGCTCATCGACGCCTCAGAATCAACGAGCTGAACCAACAACACAATCAACTTCTGAGCCAGCTGGATGCCGAGAAGGAGAAAGGTAAGGCGCTTGAGAAACTGAAGAAGGTGAGAGGCAATAACGGGCGTGGTTGGTGGGAGTCTCCAACTGAAGAACTGGGAATTGAGGAATTGCAACAAGTTGATGGATCGCTGGGAGAATTGTACCAAAATGTTTGTCATGAACTCAAAGAGCGCGGCGTTCTTGGATCTTCTTCATACTCAGCTTCAAACACTTTGGGCTTTGATCATGCCGGCCGTGAAGAAACAATTCCTTTCAATATCTTAGCAACTGGAGCTGCTGCTGCTGCTGGTCCTTCTTCCGCTACTTATCTTCCTGATCCTAATCCCTTCGATTATGGACAACAACCACAACCACATCTCCCTCATCACCACCACCACCATCCATGA

Coding sequence (CDS)

ATGGCCGACGGCAGCACCAAAATTAAGCAAACAAAGGGCCGACAAAAGATCGAGATGAAGAAGATTGAAAACGAAGACGACCGCCTCATCACCTTCTCCAAGCGCCGCTCCGGCATCTACAAAAAGGCCAGCGAATTAGCCACCTTGTGCGGCGCTGAAGTCGGCGTGGTCGTGTTTTCCCCAGCTGGAAAGCCCTTTTCCTTTGCTCATCCATGCATCGAATCTGTGGCTAACAAATTCCTTGATGAAAACCCTCAGCCAAACGACAACACTCACCCGCTTGTCGAAGCTCATCGACGCCTCAGAATCAACGAGCTGAACCAACAACACAATCAACTTCTGAGCCAGCTGGATGCCGAGAAGGAGAAAGGTAAGGCGCTTGAGAAACTGAAGAAGGTGAGAGGCAATAACGGGCGTGGTTGGTGGGAGTCTCCAACTGAAGAACTGGGAATTGAGGAATTGCAACAAGTTGATGGATCGCTGGGAGAATTGTACCAAAATGTTTGTCATGAACTCAAAGAGCGCGGCGTTCTTGGATCTTCTTCATACTCAGCTTCAAACACTTTGGGCTTTGATCATGCCGGCCGTGAAGAAACAATTCCTTTCAATATCTTAGCAACTGGAGCTGCTGCTGCTGCTGGTCCTTCTTCCGCTACTTATCTTCCTGATCCTAATCCCTTCGATTATGGACAACAACCACAACCACATCTCCCTCATCACCACCACCACCATCCATGA

Protein sequence

MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASNTLGFDHAGREETIPFNILATGAAAAAGPSSATYLPDPNPFDYGQQPQPHLPHHHHHHP

Homology

[Close]

BLAST of Csor.00g116030 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-34
Identity = 82/169 (48.52%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 8   IKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 67
           +K++KGRQKIEM K++NE +  +TFSKRRSG++KKASEL TLCGAEV +VVFSP  K FS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 68  FAHPCIESVANKFLDENPQP--NDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGK 127
           F HP ++SV ++F++ NP P    N   L E  R   + +LN    Q+LSQL+ EK+K  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 128 ALEKLK---KVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHE 172
            L+K++   K  GN    WWE P EEL + +L+   G+L  L + V  E
Sbjct: 122 ELKKIREKTKALGN----WWEDPVEELALSQLEGFKGNLENLKKVVTVE 166

[Close]

BLAST of Csor.00g116030 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-31
Identity = 74/164 (45.12%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 6   TKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKP 65
           +K K++ GRQKI M KI+ E  R +TFSKRR+G++KKASEL TLCGAE+G++VFSPA KP
Sbjct: 56  SKKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKP 115

Query: 66  FSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGK 125
           FSF HP +ESV ++++  N      +  L  +       ELN Q   +LS+++ EK+KG+
Sbjct: 116 FSFGHPSVESVLDRYVSRNNMSLAQSQQLQGS--PAASCELNMQLTHILSEVEEEKKKGQ 175

Query: 126 ALEKLKKVRGNNGR-GWWESPTEELGIEELQQVDGSLGELYQNV 169
           A+E+++K         WWE P EE+ + +LQ++  +L EL + V
Sbjct: 176 AMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Csor.00g116030 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 65/175 (37.14%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 13  GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPC 72
           GR+KI+M+ +++ + R +TFSKRR+G++KKASELATLC AE+G+VVFSP GKPFS+  P 
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 73  IESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKG-KALEKLK 132
           ++SVA +F+ E    +D+       + R ++  L+++ + L  +++AEKE+G K+ EKL+
Sbjct: 62  LDSVAERFMREY-DDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 121

Query: 133 KVRGNNGRGWWESPTEELGIEELQQ-----------VDGSLGELYQNVCHELKER 176
                 G   ++   E L ++EL +           ++G +  L  + C  L  R
Sbjct: 122 SA----GDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSR 171

[Close]

BLAST of Csor.00g116030 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.0e-20
Identity = 58/186 (31.18%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 8   IKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 67
           +K+T GR+K+E+ K+  E +  +TFSKR++G++KKASE  TLC A++ ++VFSPAGK FS
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 68  FAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKAL 127
           F HP ++ + + F         N   L E++ +L +  LN+ + ++ ++++ E +K K  
Sbjct: 62  FGHPNVDVLLDHF--RGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKE-QKNKQS 121

Query: 128 EKLKKVRGNNGRGWWESPTEELGIEE-------LQQVDGSLGELYQNVCHELKERGVLGS 187
               +    N   WW     EL + +       L+ +   + E    + H+      +GS
Sbjct: 122 RAQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPNFYVGS 181

[Close]

BLAST of Csor.00g116030 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-19
Identity = 54/141 (38.30%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68
           ++  GR+KIE+ K+ NE +  +TFSKRRSG++KK SEL TLC AE+ ++VFSP+GK +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 69  AHPCIESVANKFLDEN--PQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKA 128
            HP +    NK LD +       N     E+  +LRI  LN+   +++++ + E+E  ++
Sbjct: 63  GHPNV----NKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQS 122

Query: 129 LEKLKKVRGNNGRGWWESPTE 148
           + + ++   +  + W  SPTE
Sbjct: 123 IVQNERENKDAEKWWRNSPTE 139

[Close]

BLAST of Csor.00g116030 vs. NCBI nr
Match: KAG6594479.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026476.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489 bits (1258), Expect = 3.51e-174
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60
           MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS
Sbjct: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60

Query: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120
           PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE
Sbjct: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120

Query: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 180
           KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS
Sbjct: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 180

Query: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAAAGPSSATYLPDPNPFDYGQQPQPHLPHH 240
           SSYSASNTLGFDHAGREETIPFNILATGAAAAAGPSSATYLPDPNPFDYGQQPQPHLPHH
Sbjct: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAAAGPSSATYLPDPNPFDYGQQPQPHLPHH 240

Query: 241 HHHHP 245
           HHHHP
Sbjct: 241 HHHHP 245

[Close]

BLAST of Csor.00g116030 vs. NCBI nr
Match: XP_023518350.1 (agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483 bits (1243), Expect = 7.05e-172
Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60
           MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS
Sbjct: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60

Query: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120
           PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE
Sbjct: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120

Query: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 180
           KEKGKALEKLKKVRGNNGRGWWESPTEELGI+ELQQVDGSLGELYQNVCHELKERGVLGS
Sbjct: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIDELQQVDGSLGELYQNVCHELKERGVLGS 180

Query: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAAA-GPSSATYLPDPNPFDYGQQPQPHLPH 240
           SSYSASNTLGFDHAGREETIPFNILATGAAAAA GPSSATYLPDPNPFDYGQQPQPHLPH
Sbjct: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAAAAGPSSATYLPDPNPFDYGQQPQPHLPH 240

Query: 241 HHHHHP 245
           HHHHHP
Sbjct: 241 HHHHHP 246

[Close]

BLAST of Csor.00g116030 vs. NCBI nr
Match: XP_023003356.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 481 bits (1239), Expect = 2.98e-171
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0


Query: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60
           MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS
Sbjct: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60

Query: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120
           PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE
Sbjct: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120

Query: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 180
           KEKGKALEKLKKVRGNNGRGWWESPTEEL IEELQQVDGSLGELYQNVCHELKERGVLGS
Sbjct: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELAIEELQQVDGSLGELYQNVCHELKERGVLGS 180

Query: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAA--AGPSSATYLPDPNPFDYGQQPQPHLP 240
           SSYSASNTLGFDHAGREETIPFNILATGAAAA  AGPSSATYLPDPNPFDYGQQPQPHLP
Sbjct: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAASAAGPSSATYLPDPNPFDYGQQPQPHLP 240

Query: 241 HHHHHHP 245
           HHHHHHP
Sbjct: 241 HHHHHHP 247

[Close]

BLAST of Csor.00g116030 vs. NCBI nr
Match: XP_022926768.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata])

HSP 1 Score: 481 bits (1237), Expect = 2.88e-170
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0


Query: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60
           MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS
Sbjct: 44  MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 103

Query: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120
           PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE
Sbjct: 104 PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 163

Query: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 180
           KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS
Sbjct: 164 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 223

Query: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAAA--GPSSATYLPDPNPFDYGQQPQPHLP 240
           SSYSASNTLGFDHAGREETIPFNILATGAAAAA  GPSSATYLPDPNPFDYGQQ QPHLP
Sbjct: 224 SSYSASNTLGFDHAGREETIPFNILATGAAAAAAAGPSSATYLPDPNPFDYGQQQQPHLP 283

Query: 241 HHHHHHP 245
           HHHHHHP
Sbjct: 284 HHHHHHP 290

[Close]

BLAST of Csor.00g116030 vs. NCBI nr
Match: XP_022146674.1 (agamous-like MADS-box protein AGL61 [Momordica charantia])

HSP 1 Score: 344 bits (883), Expect = 2.28e-117
Identity = 183/224 (81.70%), Postives = 200/224 (89.29%), Query Frame = 0


Query: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 5   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 64

Query: 69  AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 128
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 65  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 124

Query: 129 KLKKVRGN-NGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 188
           K+KKVRGN NGRGWWE+PTEE+G+EELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 125 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 184

Query: 189 TLGFDHAGREETIPFNILATGAAAAAGPSSATYLPDPNPFDYGQ 231
            + F+ AG EETIPFNILA G      P +  YLP  + FDYGQ
Sbjct: 185 -MPFNGAG-EETIPFNILANGPP----PPTNAYLP--HAFDYGQ 220

[Close]

BLAST of Csor.00g116030 vs. ExPASy TrEMBL
Match: A0A6J1KP08 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.44e-171
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0


Query: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60
           MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS
Sbjct: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60

Query: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120
           PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE
Sbjct: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120

Query: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 180
           KEKGKALEKLKKVRGNNGRGWWESPTEEL IEELQQVDGSLGELYQNVCHELKERGVLGS
Sbjct: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELAIEELQQVDGSLGELYQNVCHELKERGVLGS 180

Query: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAA--AGPSSATYLPDPNPFDYGQQPQPHLP 240
           SSYSASNTLGFDHAGREETIPFNILATGAAAA  AGPSSATYLPDPNPFDYGQQPQPHLP
Sbjct: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAASAAGPSSATYLPDPNPFDYGQQPQPHLP 240

Query: 241 HHHHHHP 245
           HHHHHHP
Sbjct: 241 HHHHHHP 247

[Close]

BLAST of Csor.00g116030 vs. ExPASy TrEMBL
Match: A0A6J1EJ54 (agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC111433790 PE=4 SV=1)

HSP 1 Score: 481 bits (1237), Expect = 1.39e-170
Identity = 244/247 (98.79%), Postives = 244/247 (98.79%), Query Frame = 0


Query: 1   MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 60
           MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS
Sbjct: 44  MADGSTKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFS 103

Query: 61  PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 120
           PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE
Sbjct: 104 PAGKPFSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 163

Query: 121 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 180
           KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS
Sbjct: 164 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGS 223

Query: 181 SSYSASNTLGFDHAGREETIPFNILATGAAAAA--GPSSATYLPDPNPFDYGQQPQPHLP 240
           SSYSASNTLGFDHAGREETIPFNILATGAAAAA  GPSSATYLPDPNPFDYGQQ QPHLP
Sbjct: 224 SSYSASNTLGFDHAGREETIPFNILATGAAAAAAAGPSSATYLPDPNPFDYGQQQQPHLP 283

Query: 241 HHHHHHP 245
           HHHHHHP
Sbjct: 284 HHHHHHP 290

[Close]

BLAST of Csor.00g116030 vs. ExPASy TrEMBL
Match: A0A6J1CYR8 (agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC111015822 PE=4 SV=1)

HSP 1 Score: 344 bits (883), Expect = 1.10e-117
Identity = 183/224 (81.70%), Postives = 200/224 (89.29%), Query Frame = 0


Query: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 5   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 64

Query: 69  AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 128
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 65  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 124

Query: 129 KLKKVRGN-NGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 188
           K+KKVRGN NGRGWWE+PTEE+G+EELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 125 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 184

Query: 189 TLGFDHAGREETIPFNILATGAAAAAGPSSATYLPDPNPFDYGQ 231
            + F+ AG EETIPFNILA G      P +  YLP  + FDYGQ
Sbjct: 185 -MPFNGAG-EETIPFNILANGPP----PPTNAYLP--HAFDYGQ 220

[Close]

BLAST of Csor.00g116030 vs. ExPASy TrEMBL
Match: A0A0A0KNT7 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE=4 SV=1)

HSP 1 Score: 311 bits (797), Expect = 1.28e-103
Identity = 181/277 (65.34%), Postives = 199/277 (71.84%), Query Frame = 0


Query: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68
           KQTKGRQKIEMKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 15  KQTKGRQKIEMKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 74

Query: 69  AHPCIESVANKFLD-------------------------ENPQPNDNT---HPLVEAHRR 128
           AHPCIE++ANKFL+                          N   N+N+   HPLVEAHRR
Sbjct: 75  AHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPLVEAHRR 134

Query: 129 LRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGS 188
           +RINELNQQHNQLLSQLDAEKEKGKALEKLK+VRGN GRGWWE+PTEELGIEELQ+VD S
Sbjct: 135 VRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGN-GRGWWETPTEELGIEELQEVDAS 194

Query: 189 LGELYQNVCHELKERGVLGSSSYSASN------TLGF----DHAGREETIPFNILATGAA 242
            GE+Y NVCH+LK+RGV+G  SY+  N      ++GF    D  G EETIPFNILA    
Sbjct: 195 FGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLG-EETIPFNILAGNVP 254

[Close]

BLAST of Csor.00g116030 vs. ExPASy TrEMBL
Match: A0A5A7UFR8 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008890 PE=4 SV=1)

HSP 1 Score: 259 bits (661), Expect = 3.93e-84
Identity = 140/187 (74.87%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68
           KQTKGRQKIEMKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 15  KQTKGRQKIEMKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 74

Query: 69  AHPCIESVANKFLDE------NPQPNDNT----------------------HPLVEAHRR 128
           AHPCIE++ANKFL++      N   N+N                       HPLVEAHRR
Sbjct: 75  AHPCIETIANKFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPLVEAHRR 134

Query: 129 LRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGS 167
           +RINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGN GRGWWE+PTEELGI+ELQ+VD S
Sbjct: 135 VRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGN-GRGWWETPTEELGIDELQEVDAS 194

[Close]

BLAST of Csor.00g116030 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 82/169 (48.52%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 8   IKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 67
           +K++KGRQKIEM K++NE +  +TFSKRRSG++KKASEL TLCGAEV +VVFSP  K FS
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 68  FAHPCIESVANKFLDENPQP--NDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGK 127
           F HP ++SV ++F++ NP P    N   L E  R   + +LN    Q+LSQL+ EK+K  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 128 ALEKLK---KVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHE 172
            L+K++   K  GN    WWE P EEL + +L+   G+L  L + V  E
Sbjct: 122 ELKKIREKTKALGN----WWEDPVEELALSQLEGFKGNLENLKKVVTVE 166

[Close]

BLAST of Csor.00g116030 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 74/164 (45.12%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 6   TKIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKP 65
           +K K++ GRQKI M KI+ E  R +TFSKRR+G++KKASEL TLCGAE+G++VFSPA KP
Sbjct: 56  SKKKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKP 115

Query: 66  FSFAHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGK 125
           FSF HP +ESV ++++  N      +  L  +       ELN Q   +LS+++ EK+KG+
Sbjct: 116 FSFGHPSVESVLDRYVSRNNMSLAQSQQLQGS--PAASCELNMQLTHILSEVEEEKKKGQ 175

Query: 126 ALEKLKKVRGNNGR-GWWESPTEELGIEELQQVDGSLGELYQNV 169
           A+E+++K         WWE P EE+ + +LQ++  +L EL + V
Sbjct: 176 AMEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Csor.00g116030 vs. TAIR 10
Match: AT3G04100.1 (AGAMOUS-like 57 )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 69/169 (40.83%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 7   KIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPF 66
           K ++TKG+QKIEMKK+EN  DR+ITFSKR++GI+KK +EL  +C  EV  ++FS   KP+
Sbjct: 8   KGRKTKGKQKIEMKKVENYGDRMITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKPY 67

Query: 67  SFAHPCIESVANKFLD---ENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEK 126
           +FAHP ++ VA++  +   + P   D+T PLVEA+++ R+++L ++   L  +L  + EK
Sbjct: 68  TFAHPSMKKVADRLKNPSRQEPLERDDTRPLVEAYKKRRLHDLVKKMEALEEELAMDLEK 127

Query: 127 GKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHEL 173
            K L++ +  +    + WW  P+E L  +ELQQ   ++ EL  N+C  +
Sbjct: 128 LKLLKESRNEK-KLDKMWWNFPSEGLSAKELQQRYQAMLELRDNLCDNM 175

[Close]

BLAST of Csor.00g116030 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-27
Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 8   IKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 67
           ++ TKGRQKIEMKK+ENE +  +TFSKRR G++KKASEL TL GAE+ ++VFSP GK FS
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 68  FAHPCIESVANKFLDENPQPN-------DNTHPLVEAHRRLRINELNQQHNQLLSQLDAE 127
           F HP ++ + ++F   NP  N       +N   LVE      I  LN    ++L+  + E
Sbjct: 62  FGHPSVQELIHRF--SNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKE 121

Query: 128 KEKGKALEKLKKVRGNNGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKE 175
           K+K   L+ LK+ R   G  W+E   ++L + E  Q+  +L ++ + +  E+ +
Sbjct: 122 KQKRMVLDLLKESREQVG-NWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQ 172

[Close]

BLAST of Csor.00g116030 vs. TAIR 10
Match: AT1G29962.1 (AGAMOUS-like 64 )

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-27
Identity = 65/173 (37.57%), Postives = 108/173 (62.43%), Query Frame = 0


Query: 7   KIKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPF 66
           K K+TKG+Q+I +KKIE ++DRL+T SKRR+GIY K SEL+ LCGAEV  + +S +GKP+
Sbjct: 2   KPKKTKGKQRINIKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKPY 61

Query: 67  SFAHPCIESVANKFLDENPQPNDNT---HPLVEAHRRLRINELNQQHNQLLSQLDAEKEK 126
           +F  P  ++VA +FL+     + ++     ++ AH++ +I EL + +N+L+ ++  E+ K
Sbjct: 62  TFGSPSFQAVAERFLNGEASSSSSSSLQRSVMNAHQQAKIQELCKVYNRLVEEITVEEVK 121

Query: 127 GKALEKLKKVRGNNGRGWWE-SPTEELGIEELQQVDGSLGELYQNVCHELKER 176
            K    L ++   N   WW+  P +    EE++++     ELY+ +C E   R
Sbjct: 122 LKKTAALAEMMPMNEDAWWKVDPNDVKDREEVKKMMEKHQELYEKLCEEAASR 174

The following BLAST results are available for this feature:

BLAST of Csor.00g116030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	3.3e-34	48.52	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	2.0e-31	45.12	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O64703	1.1e-21	37.14	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
O80807	8.0e-20	31.18	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9LMM8	1.8e-19	38.30	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]

BLAST of Csor.00g116030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594479.1	3.51e-174	100.00	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023518350.1	7.05e-172	99.19	agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]	[more]
XP_023003356.1	2.98e-171	98.79	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]
XP_022926768.1	2.88e-170	98.79	agamous-like MADS-box protein AGL61 [Cucurbita moschata]	[more]
XP_022146674.1	2.28e-117	81.70	agamous-like MADS-box protein AGL61 [Momordica charantia]	[more]

BLAST of Csor.00g116030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP08	1.44e-171	98.79	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 ...	[more]
A0A6J1EJ54	1.39e-170	98.79	agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC11143379...	[more]
A0A6J1CYR8	1.10e-117	81.70	agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC1110158...	[more]
A0A0A0KNT7	1.28e-103	65.34	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE...	[more]
A0A5A7UFR8	3.93e-84	74.87	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Csor.00g116030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	2.4e-35	48.52	AGAMOUS-like 62	[more]
AT2G24840.1	1.4e-32	45.12	AGAMOUS-like 61	[more]
AT3G04100.1	1.1e-29	40.83	AGAMOUS-like 57	[more]
AT4G36590.1	2.4e-27	40.23	MADS-box transcription factor family protein	[more]
AT1G29962.1	4.1e-27	37.57	AGAMOUS-like 64	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	GENE3D	6.10.140.920		coord: 93..173 e-value: 7.2E-7 score: 31.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..245
None	No IPR available	PANTHER	PTHR11945:SF648	BOX PROTEIN, PUTATIVE-RELATED	coord: 11..185
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 11..185
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 49..70 score: 43.8 coord: 34..49 score: 61.67 coord: 14..34 score: 51.0
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 12..71 e-value: 1.2E-30 score: 117.8
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 21..68 e-value: 1.3E-23 score: 82.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 12..72 score: 25.356867
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 24..92 e-value: 1.4E-23 score: 84.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 13..88
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 13..84 e-value: 3.88668E-34 score: 115.727

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g116030.m01	Csor.00g116030.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding